Result of GENSCAN for pF1KB8998
GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:53:18

Sequence gi568815576f:24333405_24541486 : 208082 bp : 46.64% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1006   1169  164  1  2   66   86    77 0.786   4.92
 1.02 Intr +   4982   5073   92  0  2   79  109    24 0.674   3.31
 1.03 Intr +  17330  17425   96  1  0   60  110    25 0.323   2.11
 1.04 Intr +  24575  24592   18  1  0  114   96    -2 0.245   0.01
 1.05 Intr +  29120  29138   19  1  1  100   95    16 0.399  -0.32
 1.06 Intr +  32170  32228   59  2  2   74   75    66 0.514   2.50
 1.07 Intr +  35814  35916  103  2  1   70   89    34 0.890   1.45
 1.08 Term +  38694  39025  332  1  2   29   43   202 0.920   4.62
 1.09 PlyA +  39077  39082    6                               1.05

 2.00 Prom +  40896  40935   40                              -2.46
 2.01 Init +  63940  63991   52  0  1   83   71    29 0.177   2.04
 2.02 Intr +  70871  70973  103  0  1   73   65    37 0.087  -0.87
 2.03 Intr +  74648  74675   28  2  1   87   87    24 0.175   0.32
 2.04 Intr +  78184  78300  117  0  0  104  102    73 0.997  10.96
 2.05 Intr +  79244  79303   60  1  0   62   93    82 0.967   5.03
 2.06 Term +  81130  81219   90  0  0   82   53   157 0.999   9.32
 2.07 PlyA +  82146  82151    6                               1.05

 3.04 PlyA -  83208  83203    6                               1.05
 3.03 Term -  91415  90567  849  2  0   49   42   229 0.786   7.25
 3.02 Intr -  93800  93469  332  0  2   21   72   240 0.533  11.05
 3.01 Init -  95440  95272  169  1  1   31  121    95 0.062   6.73
 3.00 Prom -  95818  95779   40                             -10.74

 4.00 Prom +  98324  98363   40                             -10.74
 4.01 Init + 100001 100332  332  1  2   92  105   807 0.827  79.58
 4.02 Term + 107179 108085  907  1  1  136   45  1110 0.817 103.27
 4.03 PlyA + 108912 108917    6                               1.05

 5.07 PlyA - 116061 116056    6                               1.05
 5.06 Term - 122978 122811  168  2  0   88   39    46 0.222  -2.42
 5.05 Intr - 126817 126706  112  0  1  114   84    18 0.575   4.38
 5.04 Intr - 127367 127335   33  1  0  126   66    16 0.357   0.54
 5.03 Intr - 127649 127506  144  1  0   65   43    96 0.453   2.20
 5.02 Intr - 138491 138364  128  2  2  121   44    59 0.173   4.28
 5.01 Init - 145448 145314  135  2  0   81   36   112 0.834   5.44
 5.00 Prom - 157220 157181   40                              -3.86

 6.00 Prom + 157725 157764   40                              -8.56
 6.01 Init + 159185 159232   48  1  0   85   65    18 0.571   0.15
 6.02 Intr + 161447 161515   69  1  0   38   94    61 0.519   1.08
 6.03 Intr + 161955 162103  149  2  2   25   62   245 0.795  14.63
 6.04 Intr + 166703 166874  172  2  1   94   61   130 0.919  10.85
 6.05 Intr + 168722 168809   88  1  1   79   64    74 0.597   3.64
 6.06 Intr + 177345 177439   95  1  2   88   97    59 0.924   6.48
 6.07 Intr + 179920 180081  162  0  0   67   83   120 0.956   9.57
 6.08 Intr + 181797 181966  170  2  2   62   43   214 0.876  13.04
 6.09 Intr + 186983 187064   82  2  1   87  103   127 0.966  13.74
 6.10 Intr + 188582 188624   43  1  1   97   95     8 0.942   0.21
 6.11 Intr + 190215 190369  155  1  2   61  100   209 0.957  19.19
 6.12 Term + 192307 192390   84  0  0   95   42   173 0.999  11.05
 6.13 PlyA + 193159 193164    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  97597  97482  116  1  2   84   53    97 0.860   5.05


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:24333405_24541486|GENSCAN_predicted_peptide_1|294_aa
XQEEERGRVYNYMNAVERDLAALRQGMGLSRRSSTSSEPTPTVKTLIKSFDSASQVPNPA
AAAIPRTPLSPSPMKTPPAAAVSPMQVCPSSVNSQPFDLLQSALSVVRASASLQQPLRDI
GHVQTKVHMPAFPVLFSNGICDSHHPKPNKRRKERPSLSIGQRIWRIKEERLAEVVSEEN
RRLSGSRPITGSEIEAIINSLPTKKSPRPDGFTAEFYQRYKEELVPFIPKLFQSIEKEGI
LPNSFYEASIILIPKPGRDTTKKENFRSISLMNIDAKILNKILANEIQLLLDPP

>gi568815576f:24333405_24541486|GENSCAN_predicted_CDS_1|885_bp
nngcaagaggaggagcgaggccgggtatacaattacatgaatgccgttgagagagatttg
gcagccttaaggcagggaatgggactgagtagaaggtcctcgacttcctcagagccaact
cctacagtaaaaaccctcatcaagtcctttgacagtgcatctcaagtaccaaaccctgct
gcagctgcaattcctcgaacgcccctgagcccaagtcctatgaaaacccctcctgcagca
gctgtgtcccctatgcaggtgtgccctagttctgtcaatagtcagccttttgaccttctt
cagtctgcgttaagtgtggtcagagccagtgcaagtctgcagcagcctctgagggacata
ggccatgttcagactaaagtccacatgccagctttccctgtcctcttctccaacggcatc
tgtgactcccaccacccgaagccgaataagagaagaaaggaaagaccctctctcagcatt
ggccagagaatatggaggatcaaagaggaacgccttgctgaagtggtgtcagaagaaaac
agaaggctatcaggaagtagaccaataacaggctctgaaattgaggcaataattaatagc
ttaccaaccaaaaaaagtccaagaccagatggattcacggccgaattctaccagaggtac
aaggaggagctggtaccattcattccgaaattattccaatcaatagaaaaagagggaata
ctccctaactcgttttatgaggccagcatcatcctgataccaaagcctggcagagacaca
acaaaaaaagagaattttagatcaatatccctgatgaacattgatgcaaaaatcctcaat
aaaatactggcaaacgaaatccagctgctgctggatccaccatga

>gi568815576f:24333405_24541486|GENSCAN_predicted_peptide_2|149_aa
MVHFISRLLYSDGLDVPGDPIQDSDDAALSVSPHCSPDSRVSTTKHLWVSPRLLRVAVRV
KNIDITNFSSSWNDGLAFCALLHTYLPAHIPYQELNSQDKRRNFMLAFQAAESVGIKSTL
DINEMVRTERPDWQNVMLYVTAIYKYFET

>gi568815576f:24333405_24541486|GENSCAN_predicted_CDS_2|450_bp
atggtgcatttcatatccaggctgctgtactcagatggcctggatgtcccaggggatccc
atacaggactccgatgatgccgcactttctgtctctccgcactgctctcctgactcacgt
gtcagcaccaccaagcacctttgggtatctccaagactgctgcgggtggctgtgagagtg
aaaaatattgacattacaaacttcagcagcagctggaatgatgggctggccttctgtgcc
ctcctgcatacatatctccctgcccacattccatatcaagaactgaacagccaggataag
agaaggaacttcatgctggctttccaggcagctgaaagtgtcggcatcaaatccacactg
gacattaatgaaatggtacggactgaacgacccgactggcagaacgtgatgctgtatgtg
acggcgatctacaagtactttgagacctga

>gi568815576f:24333405_24541486|GENSCAN_predicted_peptide_3|449_aa
MAGDLKGGKDPGHSWEAAAALQFQALQATPCLHNIGSAKRSRKSISKRKRYMKAKKGFAE
ATEGPEASPPVTRADQPGASGEKSPAQMPEETPSGTIGLPLLGQLRQPLHQVTADARDQG
CSGTSEEWAQKSSSSPCPVTPGTSFPCGVLAGGGERIPMATHRNIIWPLGRLAPNPSRAA
TIPAIPTSAPGSQTDGRGQSEARTHPHPSPVVSWVPQTQFPPPLSTEDASARPSVPDSPF
LGASRALGYLCPRLTFPGNRSPPGSSTWGISLAPGPGPPPLRKRLCAPGPSLLEELAKVH
ASARGRSAAHGRTDGLTDGRSPPATCGSAPRAAPAAALAFPPRLPLRAFRCSLGQLGGSR
TRRRNCAWDVTVPGPFTGSAGSRRGAGLGPRAGELVSGRRERNPEGSRTPASQSSRPRTP
DGPTPPGHQPRTPGTPHPGPGTQDPARQT

>gi568815576f:24333405_24541486|GENSCAN_predicted_CDS_3|1350_bp
atggcaggggacctcaaaggaggaaaggacccaggacattcctgggaggcggctgctgcc
ctgcagtttcaggcactgcaggccactccctgtctccacaacattggctcagctaagagg
agtcgcaaatcaatttcaaagcgcaagaggtatatgaaggctaagaaagggtttgcagag
gccactgagggaccagaggcgagtcctcctgtgacacgggcagaccagcccggggcctct
ggggagaagtctcctgcccagatgccagaggagacaccaagtggcaccatcggcctccct
ctgcttggccagctccggcagcctctccaccaggtgacggccgatgccagagaccagggc
tgcagcggcacatccgaggagtgggcacagaagagcagcagcagcccctgcccagtgact
cctggaacaagcttcccctgcggggtgttggcggggggtggtgagagaatccccatggca
actcacagaaacatcatctggcccttgggccgccttgcgccaaatccctcgagagccgcc
accattcccgccattcctacctccgctccgggcagccagacagacggccggggccagtcc
gaggcgcgcacccacccccatccgtcccccgtcgtctcctgggtcccccaaacccagttc
ccgccaccactgtccacggaagacgccagcgctcggcccagcgttcctgattcccccttt
ctcggcgcgtcccgggcgctcgggtatctctgcccgcgcctcaccttcccggggaaccgg
tctccgcccggctcctccacctggggaatctccctcgccccggggcccggcccgccaccc
ctcaggaagcgcctctgcgcccccggtccatccctgctggaggagctcgcgaaggttcat
gcgagcgcgcggggccggtctgcggcgcatggacggacggacggactgacggacggacgc
tccccgcccgctacctgcggctccgcaccccgcgccgcgccggccgccgcacttgccttc
cctccccgcctacccctgcgcgccttccggtgcagtttgggacagctcggagggtcccgc
acgcggcgccgcaactgcgcctgggacgtgactgtgcctgggcccttcacaggcagtgcc
ggcagccgccgcggggcaggactcggaccccgcgccggggaactggtctcggggcggcgg
gaaaggaaccctgaggggagcagaaccccagcctcccagtcctcccggccccgcaccccc
gacggccccacgccgcccggccaccagccccggacccccggcaccccgcaccccggaccc
ggcacccaggaccccgcacgccagacctag

>gi568815576f:24333405_24541486|GENSCAN_predicted_peptide_4|412_aa
MPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAI
PFAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTR
AKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYF
NFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVG
LFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFR
KIIRSHVLRQQEPFKAAGTSARVLAAHGSDGEQVSLRLNGHPPGVWANGSAPHPERRPNG
YALGLVSGGSAQESQGNTGLPDVELLSHELKGVCPEPPGLDDPLAQDGAGVS

>gi568815576f:24333405_24541486|GENSCAN_predicted_CDS_4|1239_bp
atgcccatcatgggctcctcggtgtacatcacggtggagctggccattgctgtgctggcc
atcctgggcaatgtgctggtgtgctgggccgtgtggctcaacagcaacctgcagaacgtc
accaactactttgtggtgtcactggcggcggccgacatcgcagtgggtgtgctcgccatc
ccctttgccatcaccatcagcaccgggttctgcgctgcctgccacggctgcctcttcatt
gcctgcttcgtcctggtcctcacgcagagctccatcttcagtctcctggccatcgccatt
gaccgctacattgccatccgcatcccgctccggtacaatggcttggtgaccggcacgagg
gctaagggcatcattgccatctgctgggtgctgtcgtttgccatcggcctgactcccatg
ctaggttggaacaactgcggtcagccaaaggagggcaagaaccactcccagggctgcggg
gagggccaagtggcctgtctctttgaggatgtggtccccatgaactacatggtgtacttc
aacttctttgcctgtgtgctggtgcccctgctgctcatgctgggtgtctatttgcggatc
ttcctggcggcgcgacgacagctgaagcagatggagagccagcctctgccgggggagcgg
gcacggtccacactgcagaaggaggtccatgctgccaagtcactggccatcattgtgggg
ctctttgccctctgctggctgcccctacacatcatcaactgcttcactttcttctgcccc
gactgcagccacgcccctctctggctcatgtacctggccatcgtcctctcccacaccaat
tcggttgtgaatcccttcatctacgcctaccgtatccgcgagttccgccagaccttccgc
aagatcattcgcagccacgtcctgaggcagcaagaacctttcaaggcagctggcaccagt
gcccgggtcttggcagctcatggcagtgacggagagcaggtcagcctccgtctcaacggc
cacccgccaggagtgtgggccaacggcagtgctccccaccctgagcggaggcccaatggc
tatgccctggggctggtgagtggagggagtgcccaagagtcccaggggaacacgggcctc
ccagacgtggagctccttagccatgagctcaagggagtgtgcccagagccccctggccta
gatgaccccctggcccaggatggagcaggagtgtcctga

>gi568815576f:24333405_24541486|GENSCAN_predicted_peptide_5|239_aa
MGIEEIRMWKDEKYKVPETEMFREVRGDAGISRPPVSVSSNINAAEIPWNETNGSPGFGR
VSSEQMGEQQPERLLPLAENTILDLNVLCLSRDMLHTVLLLEYLTTELTLRNHHFNILKQ
KLSSTQEYDQSLTCRASGPEVGGCPSRPYLLTSHYGRRGFSSFFFICPLYTYASLSVPPC
SQYSFQRLQVFSVLVFSSYEPAPRKGPVYSIHTEMTDMTDMSFIKDKNPHLACAKEVKL

>gi568815576f:24333405_24541486|GENSCAN_predicted_CDS_5|720_bp
atgggaatagaagagatcaggatgtggaaagatgagaagtataaagtacctgagacagaa
atgttcagagaagttagaggagatgcaggaatcagcaggcccccagtgtcagtgtccagc
aatattaatgctgcagagattccttggaatgaaaccaatgggagtccagggtttgggaga
gtctcatcagagcagatgggcgagcagcagccagaacgcttgttgcctttggctgagaac
actatcctggatctgaatgtcttgtgtttatcccgagatatgcttcacactgtgctgctg
ctggagtatctgacaacagagctcactctcagaaaccaccatttcaacattctgaaacag
aaactctccagcacacaggagtacgatcagagtctgacatgcagggcatcaggacctgaa
gtaggtggctgcccatccaggccttatctgttgacttcccactatggaagacgaggattt
agctccttcttcttcatttgccccctctatacatatgcatccctctctgtgcccccttgc
tcccagtatagttttcagaggctacaagtcttcagtgttctagtcttctcttcgtatgag
cctgctcccaggaaaggaccagtatactccattcacactgagatgactgatatgactgat
atgtcttttataaaagacaaaaacccacatttggcttgtgccaaagaagtaaagctctaa

>gi568815576f:24333405_24541486|GENSCAN_predicted_peptide_6|438_aa
MEELQMTLKNLANQWVPPGARAQDSLTTSPGSRPDTKGQGRQFVRGHKHWRTVAMAGAEW
KSLEECLEKHLPLPDLQEVKRVLYGKELRKLDLPREAFEAASREDFELQGYAFEAAEEQL
RRPRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFA
FCTREKLPWTEFAESAEDGPTTRFCQKLAKNHDMVVVSPILERDSEHGDVLWNTAVVISN
SGAVLGKTRKNHIPRVGDFNESTYYMEGNLGHPVFQTQFGRIAVNICYGRHHPLNWLMYS
INGAEIIFNPSATIGALSESLWPIEARNAAIANHCFTCAINRVGTEHFPNEFTSGDGKKA
HQDFGYFYGSSYVAAPDSSRTPGLSRSRDGLLVAKLDLNLCQQVNDVWNFKMTGRYEMYA
RELAEAVKSNYSPTIVKE

>gi568815576f:24333405_24541486|GENSCAN_predicted_CDS_6|1317_bp
atggaggagttgcagatgactctcaaaaacttggcaaatcagtgggtgcctcccggagcc
cgcgcccaggactccctcacgacctctccagggtcccggcccgacaccaaggggcagggc
aggcagttcgtgcgcggacacaagcactggcggaccgtggccatggcgggcgctgagtgg
aagtcgctggaggaatgcttggagaagcacctgccgctccccgacttgcaggaagtgaag
cgcgttctctatggcaaggaactcaggaagcttgatctgcccagggaagctttcgaagct
gcctccagagaagactttgaactgcagggatatgcctttgaagcagcggaggagcagctg
agacgaccccgcattgtgcacgtggggctggttcagaacagaatccccctccccgcaaat
gcccctgtggcagaacaggtctctgcccttcatagacgcataaaggctatcgtagaggtg
gctgcaatgtgtggagtcaacatcatctgtttccaggaagcatggactatgccctttgcc
ttctgtacgagagagaagcttccttggacagaatttgctgagtcagcagaggatgggccc
accaccagattctgtcagaagctggcgaagaaccatgacatggtggtggtgtctcccatc
ctggaacgagacagcgagcatggggatgttttgtggaatacagccgtggtgatctccaat
tccggagcagtcctgggaaagaccaggaaaaaccacatccccagagtgggtgatttcaac
gagtcaacttactacatggagggaaacctgggccaccccgtgttccagacgcagttcgga
aggatcgcggtgaacatttgctacgggcggcaccaccccctcaactggcttatgtacagc
atcaacggggctgagatcatcttcaacccctcggccacgataggagcactcagcgagtcc
ctgtggcccatcgaggccagaaacgcagccattgccaatcactgcttcacctgcgccatc
aatcgagtgggcaccgagcacttcccgaacgagtttacctcgggagatggaaagaaagct
caccaggactttggctacttttatggctcgagctatgtggcagcccctgacagcagccgg
actcctgggctgtcccgtagccgggatggactgctagttgctaagctcgacctaaacctc
tgccagcaggtgaatgatgtctggaacttcaagatgacgggcaggtatgagatgtacgca
cgggagctcgccgaagctgtcaagtccaactacagccccaccatcgtgaaagagtag
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