Result of FASTA (omim) for pF1KB6622
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6622, 436 aa
  1>>>pF1KB6622 436 - 436 aa - 436 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7729+/-0.000501; mu= 15.7313+/- 0.031
 mean_var=80.5129+/-16.627, 0's: 0 Z-trim(109.2): 27  B-trim: 434 in 2/48
 Lambda= 0.142936
 statistics sampled from 17326 (17344) to 17326 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.547), E-opt: 0.2 (0.203), width:  16
 Scan time:  8.570

The best scores are:                                      opt bits E(85289)
XP_016859715 (OMIM: 603056,613800) PREDICTED: orig ( 436) 2829 593.6 3.4e-169
XP_011509557 (OMIM: 603056,613800) PREDICTED: orig ( 436) 2829 593.6 3.4e-169
NP_859525 (OMIM: 603056,613800) origin recognition ( 436) 2829 593.6 3.4e-169
NP_002543 (OMIM: 603056,613800) origin recognition ( 436) 2829 593.6 3.4e-169
NP_859526 (OMIM: 603056,613800) origin recognition ( 436) 2829 593.6 3.4e-169
NP_001177808 (OMIM: 603056,613800) origin recognit ( 436) 2829 593.6 3.4e-169
NP_001177811 (OMIM: 603056,613800) origin recognit ( 362) 2348 494.3 2.1e-139
NP_001177810 (OMIM: 603056,613800) origin recognit ( 352) 2293 483.0 5.3e-136
XP_016859716 (OMIM: 603056,613800) PREDICTED: orig ( 352) 2293 483.0 5.3e-136
XP_011539829 (OMIM: 224690,601902) PREDICTED: orig ( 501)  164 44.0   0.001
XP_016856878 (OMIM: 224690,601902) PREDICTED: orig ( 615)  164 44.1  0.0012
NP_001177748 (OMIM: 224690,601902) origin recognit ( 856)  164 44.2  0.0016
NP_004144 (OMIM: 224690,601902) origin recognition ( 861)  164 44.2  0.0016
NP_001177747 (OMIM: 224690,601902) origin recognit ( 861)  164 44.2  0.0016


>>XP_016859715 (OMIM: 603056,613800) PREDICTED: origin r  (436 aa)
 initn: 2829 init1: 2829 opt: 2829  Z-score: 3158.6  bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)

               10        20        30        40        50        60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
XP_016 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
              370       380       390       400       410       420

              430      
pF1KB6 CPTDVRQWATSSLSWL
       ::::::::::::::::
XP_016 CPTDVRQWATSSLSWL
              430      

>>XP_011509557 (OMIM: 603056,613800) PREDICTED: origin r  (436 aa)
 initn: 2829 init1: 2829 opt: 2829  Z-score: 3158.6  bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)

               10        20        30        40        50        60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
XP_011 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
              370       380       390       400       410       420

              430      
pF1KB6 CPTDVRQWATSSLSWL
       ::::::::::::::::
XP_011 CPTDVRQWATSSLSWL
              430      

>>NP_859525 (OMIM: 603056,613800) origin recognition com  (436 aa)
 initn: 2829 init1: 2829 opt: 2829  Z-score: 3158.6  bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)

               10        20        30        40        50        60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_859 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
              370       380       390       400       410       420

              430      
pF1KB6 CPTDVRQWATSSLSWL
       ::::::::::::::::
NP_859 CPTDVRQWATSSLSWL
              430      

>>NP_002543 (OMIM: 603056,613800) origin recognition com  (436 aa)
 initn: 2829 init1: 2829 opt: 2829  Z-score: 3158.6  bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)

               10        20        30        40        50        60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_002 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
              370       380       390       400       410       420

              430      
pF1KB6 CPTDVRQWATSSLSWL
       ::::::::::::::::
NP_002 CPTDVRQWATSSLSWL
              430      

>>NP_859526 (OMIM: 603056,613800) origin recognition com  (436 aa)
 initn: 2829 init1: 2829 opt: 2829  Z-score: 3158.6  bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)

               10        20        30        40        50        60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_859 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
              370       380       390       400       410       420

              430      
pF1KB6 CPTDVRQWATSSLSWL
       ::::::::::::::::
NP_859 CPTDVRQWATSSLSWL
              430      

>>NP_001177808 (OMIM: 603056,613800) origin recognition   (436 aa)
 initn: 2829 init1: 2829 opt: 2829  Z-score: 3158.6  bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)

               10        20        30        40        50        60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
              370       380       390       400       410       420

              430      
pF1KB6 CPTDVRQWATSSLSWL
       ::::::::::::::::
NP_001 CPTDVRQWATSSLSWL
              430      

>>NP_001177811 (OMIM: 603056,613800) origin recognition   (362 aa)
 initn: 2348 init1: 2348 opt: 2348  Z-score: 2623.8  bits: 494.3 E(85289): 2.1e-139
Smith-Waterman score: 2348; 99.7% identity (100.0% similar) in 362 aa overlap (75-436:1-362)

           50        60        70        80        90       100    
pF1KB6 KHLSELLKRTALHGESNSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQ
                                     :::.::::::::::::::::::::::::::
NP_001                               MLINHALKELMEIEEVSENVLQVHLNGLLQ
                                             10        20        30

          110       120       130       140       150       160    
pF1KB6 INDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLF
               40        50        60        70        80        90

          170       180       190       200       210       220    
pF1KB6 AHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFP
              100       110       120       130       140       150

          230       240       250       260       270       280    
pF1KB6 QYVKIFKEQLSLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QYVKIFKEQLSLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLM
              160       170       180       190       200       210

          290       300       310       320       330       340    
pF1KB6 LALNRVTASHPFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LALNRVTASHPFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPF
              220       230       240       250       260       270

          350       360       370       380       390       400    
pF1KB6 NFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKL
              280       290       300       310       320       330

          410       420       430      
pF1KB6 LLDNTQIMNALQKYPNCPTDVRQWATSSLSWL
       ::::::::::::::::::::::::::::::::
NP_001 LLDNTQIMNALQKYPNCPTDVRQWATSSLSWL
              340       350       360  

>>NP_001177810 (OMIM: 603056,613800) origin recognition   (352 aa)
 initn: 2293 init1: 2293 opt: 2293  Z-score: 2562.6  bits: 483.0 E(85289): 5.3e-136
Smith-Waterman score: 2293; 100.0% identity (100.0% similar) in 352 aa overlap (85-436:1-352)

           60        70        80        90       100       110    
pF1KB6 ALHGESNSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEI
                                     ::::::::::::::::::::::::::::::
NP_001                               MEIEEVSENVLQVHLNGLLQINDKIALKEI
                                             10        20        30

          120       130       140       150       160       170    
pF1KB6 TRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLY
               40        50        60        70        80        90

          180       190       200       210       220       230    
pF1KB6 NLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQL
              100       110       120       130       140       150

          240       250       260       270       280       290    
pF1KB6 SLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASH
              160       170       180       190       200       210

          300       310       320       330       340       350    
pF1KB6 PFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQ
              220       230       240       250       260       270

          360       370       380       390       400       410    
pF1KB6 KFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNA
              280       290       300       310       320       330

          420       430      
pF1KB6 LQKYPNCPTDVRQWATSSLSWL
       ::::::::::::::::::::::
NP_001 LQKYPNCPTDVRQWATSSLSWL
              340       350  

>>XP_016859716 (OMIM: 603056,613800) PREDICTED: origin r  (352 aa)
 initn: 2293 init1: 2293 opt: 2293  Z-score: 2562.6  bits: 483.0 E(85289): 5.3e-136
Smith-Waterman score: 2293; 100.0% identity (100.0% similar) in 352 aa overlap (85-436:1-352)

           60        70        80        90       100       110    
pF1KB6 ALHGESNSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEI
                                     ::::::::::::::::::::::::::::::
XP_016                               MEIEEVSENVLQVHLNGLLQINDKIALKEI
                                             10        20        30

          120       130       140       150       160       170    
pF1KB6 TRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLY
               40        50        60        70        80        90

          180       190       200       210       220       230    
pF1KB6 NLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQL
              100       110       120       130       140       150

          240       250       260       270       280       290    
pF1KB6 SLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASH
              160       170       180       190       200       210

          300       310       320       330       340       350    
pF1KB6 PFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQ
              220       230       240       250       260       270

          360       370       380       390       400       410    
pF1KB6 KFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNA
              280       290       300       310       320       330

          420       430      
pF1KB6 LQKYPNCPTDVRQWATSSLSWL
       ::::::::::::::::::::::
XP_016 LQKYPNCPTDVRQWATSSLSWL
              340       350  

>>XP_011539829 (OMIM: 224690,601902) PREDICTED: origin r  (501 aa)
 initn:  50 init1:  50 opt: 164  Z-score: 187.7  bits: 44.0 E(85289): 0.001
Smith-Waterman score: 174; 21.3% identity (57.1% similar) in 352 aa overlap (7-352:115-441)

                                       10        20        30      
pF1KB6                         MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSN
                                     .: ::   :  : ...  : :.  ..   .
XP_011 SSLKSSLHTLTKVPKKSLKPRTPRCAAPQIRSRSLAAQEPASVLEEA-RLRLHVSAVPES
           90       100       110       120       130        140   

         40        50        60        70        80        90      
pF1KB6 LFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLISHALKELMEIEEVSE--NV
       :   . ... . ....   :   .. . : :  :.:::  . .... :..  ....    
XP_011 LPCREQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPF
           150       160       170       180       190       200   

          100       110       120       130       140       150    
pF1KB6 LQVHLNGLLQINDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPV
         ...::. ....    ...  :. :....:.:. .. : .: .  .   .:.   .  .
XP_011 QYIEVNGM-KLTEP---HQVYVQI-LQKLTGQKATANHAAEL-LAKQFCTRGSPQET--T
           210           220        230       240        250       

          160       170       180       190       200        210   
pF1KB6 IFILDEFDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILE-LLEKRVKSRFSHR
       ....::.::.  :: : ..:::::     .. ..:....  .:. : .. .::.::..  
XP_011 VLLVDELDLLWTHK-QDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLT
         260        270       280       290       300       310    

           220       230       240       250        260       270  
pF1KB6 QIHLMNSFGFPQYVKIFKEQLSLPAEFPDKVFAEKWNENVQYLSED-RSVQEVLQKHFNI
       ..  .. . . :  .:.. .:.    : : .. .   ..:  :: : :   .. ..  .:
XP_011 RM-CFQPYTYSQLQQILRSRLKHLKAFEDDAI-QLVARKVAALSGDARRCLDICRRATEI
           320       330       340        350       360       370  

            280       290       300       310       320       330  
pF1KB6 SKNLRSLHMLLMLALNRVTASHPFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAM
        .    . .    . . :: .:  : ::: : .:      :  . ... ::::  .. :.
XP_011 CE----FSQQKPDSPGLVTIAHS-MEAVDEMFSS------SYITAIKNSSVLEQSFLRAI
                380       390        400             410       420 

            340         350       360       370       380       390
pF1KB6 KHLNDIYEE--EPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMER
         : .. .   :  .::..:..                                      
XP_011 --LAEFRRSGLEEATFQQIYSQHVALCRMEGLPYPTMSETMAVCSHLGSCRLLLVEPSRN
               430       440       450       460       470         




436 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 18:47:36 2016 done: Sat Nov  5 18:47:37 2016
 Total Scan time:  8.570 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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