(Linear) (Six-base) MAPSORT of: KIBB0411.seq Check: 5169 from: 1 to: 1401 KIBB0411.orf With 182 enzymes: SgfI * October 7, 2009 14:13 .. AccI GT'mk_AC Cuts at: 0 455 1401 Size: 455 946 Acc65I G'GTAC_C Cuts at: 0 207 1401 Size: 207 1194 AfeI AGC'GCT Cuts at: 0 988 1401 Size: 988 413 AhdI GACnn_n'nnGTC Cuts at: 0 146 1401 Size: 146 1255 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 1083 1246 1401 Size: 1083 163 155 Fragments arranged by size: 1083 163 155 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 402 434 626 658 1401 Size: 402 32 192 32 743 Fragments arranged by size: 743 402 192 32 32 AlwNI CAG_nnn'CTG Cuts at: 0 1200 1401 Size: 1200 201 ApaLI G'TGCA_C Cuts at: 0 1281 1401 Size: 1281 120 ApoI r'AATT_y Cuts at: 0 320 679 1401 Size: 320 359 722 Fragments arranged by size: 722 359 320 AseI AT'TA_AT Cuts at: 0 49 1401 Size: 49 1352 AvaI C'yCGr_G Cuts at: 0 434 1401 Size: 434 967 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 0 199 232 1401 Size: 199 33 1169 Fragments arranged by size: 1169 199 33 BanI G'GyrC_C Cuts at: 0 207 439 967 1401 Size: 207 232 528 434 Fragments arranged by size: 528 434 232 207 BanII G_rGCy'C Cuts at: 0 886 1401 Size: 886 515 BbeI G_GCGC'C Cuts at: 0 443 1401 Size: 443 958 BbsI GAAGACnn'nnnn_ Cuts at: 0 1058 1401 Size: 1058 343 BlpI GC'TnA_GC Cuts at: 0 999 1401 Size: 999 402 Bme1580I G_kGCm'C Cuts at: 0 970 1285 1401 Size: 970 315 116 Fragments arranged by size: 970 315 116 BmrI ACTGGGnnnn_n' Cuts at: 0 125 502 1401 Size: 125 377 899 Fragments arranged by size: 899 377 125 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 667 676 1126 1401 Size: 667 9 450 275 Fragments arranged by size: 667 450 275 9 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 697 1297 1401 Size: 697 600 104 Fragments arranged by size: 697 600 104 BsaHI Gr'CG_yC Cuts at: 0 440 1401 Size: 440 961 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 626 656 1401 Size: 626 30 745 Fragments arranged by size: 745 626 30 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 921 1401 Size: 921 480 BsiHKAI G_wGCw'C Cuts at: 0 16 1285 1401 Size: 16 1269 116 Fragments arranged by size: 1269 116 16 Bsp1286I G_dGCh'C Cuts at: 0 16 886 970 1285 1401 Size: 16 870 84 315 116 Fragments arranged by size: 870 315 116 84 16 BspHI T'CATG_A Cuts at: 0 753 1401 Size: 753 648 BsrDI GCAATG_nn' Cuts at: 0 1055 1265 1401 Size: 1055 210 136 Fragments arranged by size: 1055 210 136 BsrGI T'GTAC_A Cuts at: 0 1019 1401 Size: 1019 382 BssSI C'ACGA_G Cuts at: 0 559 1401 Size: 559 842 BstZ17I GTA'TAC Cuts at: 0 456 1401 Size: 456 945 Bsu36I CC'TnA_GG Cuts at: 0 851 1401 Size: 851 550 BtgI C'CryG_G Cuts at: 0 211 1401 Size: 211 1190 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 552 1401 Size: 552 849 BtsI GCAGTG_nn' Cuts at: 0 278 1401 Size: 278 1123 DraI TTT'AAA Cuts at: 0 62 1401 Size: 62 1339 EaeI y'GGCC_r Cuts at: 0 198 1401 Size: 198 1203 EarI CTCTTCn'nnn_ Cuts at: 0 29 104 1401 Size: 29 75 1297 Fragments arranged by size: 1297 75 29 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 667 676 1126 1401 Size: 667 9 450 275 Fragments arranged by size: 667 450 275 9 EcoO109I rG'GnC_Cy Cuts at: 0 855 1158 1401 Size: 855 303 243 Fragments arranged by size: 855 303 243 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 474 1401 Size: 474 927 HaeII r_GCGC'y Cuts at: 0 443 990 1349 1401 Size: 443 547 359 52 Fragments arranged by size: 547 443 359 52 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 132 164 622 654 1401 Size: 132 32 458 32 747 Fragments arranged by size: 747 458 132 32 32 HindIII A'AGCT_T Cuts at: 0 1097 1401 Size: 1097 304 KasI G'GCGC_C Cuts at: 0 439 1401 Size: 439 962 KpnI G_GTAC'C Cuts at: 0 211 1401 Size: 211 1190 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 299 1401 Size: 299 1102 MscI TGG'CCA Cuts at: 0 200 1401 Size: 200 1201 MslI CAynn'nnrTG Cuts at: 0 62 293 955 1401 Size: 62 231 662 446 Fragments arranged by size: 662 446 231 62 NarI GG'CG_CC Cuts at: 0 440 1401 Size: 440 961 NcoI C'CATG_G Cuts at: 0 211 1401 Size: 211 1190 NspI r_CATG'y Cuts at: 0 709 960 1401 Size: 709 251 441 Fragments arranged by size: 709 441 251 PacI TTA_AT'TAA Cuts at: 0 53 1401 Size: 53 1348 PasI CC'CwG_GG Cuts at: 0 977 1401 Size: 977 424 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 626 658 1401 Size: 626 32 743 Fragments arranged by size: 743 626 32 PpuMI rG'GwC_Cy Cuts at: 0 855 1401 Size: 855 546 PshAI GACnn'nnGTC Cuts at: 0 1070 1401 Size: 1070 331 PstI C_TGCA'G Cuts at: 0 1072 1401 Size: 1072 329 SapI GCTCTTCn'nnn_ Cuts at: 0 104 1401 Size: 104 1297 SfcI C'TryA_G Cuts at: 0 930 1068 1401 Size: 930 138 333 Fragments arranged by size: 930 333 138 SfoI GGC'GCC Cuts at: 0 441 1401 Size: 441 960 SmlI C'TyrA_G Cuts at: 0 712 1312 1401 Size: 712 600 89 Fragments arranged by size: 712 600 89 SspI AAT'ATT Cuts at: 0 414 1401 Size: 414 987 StyI C'CwwG_G Cuts at: 0 211 1401 Size: 211 1190 SwaI ATTT'AAAT Cuts at: 0 62 1401 Size: 62 1339 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 684 847 969 1401 Size: 684 163 122 432 Fragments arranged by size: 684 432 163 122 TatI w'GTAC_w Cuts at: 0 5 1019 1401 Size: 5 1014 382 Fragments arranged by size: 1014 382 5 Enzymes that do cut: AccI Acc65I AfeI AhdI AlfI AloI AlwNI ApaLI ApoI AseI AvaI BaeI BanI BanII BbeI BbsI BlpI Bme1580I BmrI BpmI BpuEI BsaHI BsaXI BsgI BsiHKAI Bsp1286I BspHI BsrDI BsrGI BssSI BstZ17I Bsu36I BtgI BtgZI BtsI DraI EaeI EarI Eco57MI EcoO109I FalI HaeII Hin4I HindIII KasI KpnI MmeI MscI MslI NarI NcoI NspI PacI PasI PpiI PpuMI PshAI PstI SapI SfcI SfoI SmlI SspI StyI SwaI TaqII TatI Enzymes that do not cut: AarI AatII AclI AcuI AflII AflIII AgeI AleI ApaI AscI AsiSI AvrII BamHI BbvCI BcgI BciVI BclI BfrBI BglI BglII BmgBI BmtI BplI Bpu10I BsaI BsaAI BsaBI BsaWI BseRI BseYI BsiEI BsiWI BsmI BsmBI BspEI BspMI BsrBI BsrFI BssHII BstAPI BstBI BstEII BstXI BstYI ClaI CspCI DraIII DrdI EagI EciI EcoICRI EcoNI EcoRI EcoRV FseI FspI FspAI HincII HpaI MfeI MluI MspA1I NaeI NdeI NgoMIV NheI NotI NruI NsiI PciI PflMI PfoI PmeI PmlI PsiI PspOMI PspXI PsrI PvuI PvuII RsrII SacI SacII SalI SanDI SbfI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI StuI TstI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI