Result of FASTA (ccds) for pF1KB5897
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5897, 837 aa
  1>>>pF1KB5897 837 - 837 aa - 837 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.4998+/-0.00125; mu= -3.1537+/- 0.076
 mean_var=495.0815+/-100.073, 0's: 0 Z-trim(113.9): 29  B-trim: 0 in 0/55
 Lambda= 0.057642
 statistics sampled from 14518 (14542) to 14518 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.745), E-opt: 0.2 (0.447), width:  16
 Scan time:  4.790

The best scores are:                                      opt bits E(32554)
CCDS11417.1 KAT2A gene_id:2648|Hs108|chr17         ( 837) 5659 485.8 1.3e-136
CCDS2634.1 KAT2B gene_id:8850|Hs108|chr3           ( 832) 3941 343.0 1.3e-93


>>CCDS11417.1 KAT2A gene_id:2648|Hs108|chr17              (837 aa)
 initn: 5659 init1: 5659 opt: 5659  Z-score: 2566.2  bits: 485.8 E(32554): 1.3e-136
Smith-Waterman score: 5659; 100.0% identity (100.0% similar) in 837 aa overlap (1-837:1-837)

               10        20        30        40        50        60
pF1KB5 MAEPSQAPTPAPAAQPRPLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAAPAGSTGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MAEPSQAPTPAPAAQPRPLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAAPAGSTGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 GGPGVGSGGAGSGGDPARPGLSQQQRASQRKAQVRGLPRAKKLEKLGVFSACKANETCKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GGPGVGSGGAGSGGDPARPGLSQQQRASQRKAQVRGLPRAKKLEKLGVFSACKANETCKC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 NGWKNPKPPTAPRMDLQQPAANLSELCRSCEHPLADHVSHLENVSEDEINRLLGMVVDVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 NGWKNPKPPTAPRMDLQQPAANLSELCRSCEHPLADHVSHLENVSEDEINRLLGMVVDVE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 NLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMTRPVVEGSLGSPPFEKPNIEQGVLNFVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 NLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMTRPVVEGSLGSPPFEKPNIEQGVLNFVQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 YKFSHLAPRERQTMFELSKMFLLCLNYWKLETPAQFRQRSQAEDVATYKVNYTRWLCYCH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YKFSHLAPRERQTMFELSKMFLLCLNYWKLETPAQFRQRSQAEDVATYKVNYTRWLCYCH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 VPQSCDSLPRYETTHVFGRSLLRSIFTVTRRQLLEKFRVEKDKLVPEKRTLILTHFPKFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VPQSCDSLPRYETTHVFGRSLLRSIFTVTRRQLLEKFRVEKDKLVPEKRTLILTHFPKFL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 SMLEEEIYGANSPIWESGFTMPPSEGTQLVPRPASVSAAVVPSTPIFSPSMGGGSNSSLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SMLEEEIYGANSPIWESGFTMPPSEGTQLVPRPASVSAAVVPSTPIFSPSMGGGSNSSLS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 LDSAGAEPMPGEKRTLPENLTLEDAKRLRVMGDIPMELVNEVMLTITDPAAMLGPETSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LDSAGAEPMPGEKRTLPENLTLEDAKRLRVMGDIPMELVNEVMLTITDPAAMLGPETSLL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 SANAARDETARLEERRGIIEFHVIGNSLTPKANRRVLLWLVGLQNVFSHQLPRMPKEYIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SANAARDETARLEERRGIIEFHVIGNSLTPKANRRVLLWLVGLQNVFSHQLPRMPKEYIA
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB5 RLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKE
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB5 YHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELNPRIP
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB5 YTELSHIIKKQKEIIKKLIERKQAQIRKVYPGLSCFKEGVRQIPVESVPGIRETGWKPLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YTELSHIIKKQKEIIKKLIERKQAQIRKVYPGLSCFKEGVRQIPVESVPGIRETGWKPLG
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB5 KEKGKELKDPDQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KEKGKELKDPDQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTE
              730       740       750       760       770       780

              790       800       810       820       830       
pF1KB5 RLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKEGGLIDK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKEGGLIDK
              790       800       810       820       830       

>>CCDS2634.1 KAT2B gene_id:8850|Hs108|chr3                (832 aa)
 initn: 3534 init1: 2373 opt: 3941  Z-score: 1794.2  bits: 343.0 E(32554): 1.3e-93
Smith-Waterman score: 3941; 71.6% identity (86.4% similar) in 821 aa overlap (26-837:22-832)

               10        20        30        40        50        60
pF1KB5 MAEPSQAPTPAPAAQPRPLQSPAPAPTPTPAPSPASAPIPTPTPAPAPAPAAAPAGSTGT
                                :   : :.::. :   :.: :  .: :: ::..:.
CCDS26     MSEAGGAGPGGCGAGAGAGAGPGALP-PQPAALP---PAP-PQGSPCAAAAGGSGA
                   10        20         30            40        50 

               70        80        90       100       110       120
pF1KB5 GGPGVGSGGAGSGGDPARPGLSQQQRASQRKAQVRGLPRAKKLEKLGVFSACKANETCKC
        ::... ..::..  :.  :   . : . .:::.:. :::::::::::.:::::.:.:::
CCDS26 CGPATAVAAAGTAEGPGGGG---SARIAVKKAQLRSAPRAKKLEKLGVYSACKAEESCKC
              60        70           80        90       100        

               130       140       150       160       170         
pF1KB5 NGWKNPKP-PTAPRMDLQQPAANLSELCRSCEHPLADHVSHLENVSEDEINRLLGMVVDV
       ::::::.: :: :: ::::  ..:.: :::: : :: ::::::::::.:.:::::.:.::
CCDS26 NGWKNPNPSPTPPRADLQQIIVSLTESCRSCSHALAAHVSHLENVSEEEMNRLLGIVLDV
      110       120       130       140       150       160        

     180       190       200       210       220        230        
pF1KB5 ENLFMSVHKEEDTDTKQVYFYLFKLLRKCILQMTRPVVEGSL-GSPPFEKPNIEQGVLNF
       : ::  ::::::.::::::::::::::: :::  .:::::::  .::::::.::::: ::
CCDS26 EYLFTCVHKEEDADTKQVYFYLFKLLRKSILQRGKPVVEGSLEKKPPFEKPSIEQGVNNF
      170       180       190       200       210       220        

      240       250       260       270       280       290        
pF1KB5 VQYKFSHLAPRERQTMFELSKMFLLCLNYWKLETPAQFRQRSQAEDVATYKVNYTRWLCY
       ::::::::  .::::. ::.::::  .:::.::.:.: : ::  .:.. :: ::::::::
CCDS26 VQYKFSHLPAKERQTIVELAKMFLNRINYWHLEAPSQRRLRSPNDDISGYKENYTRWLCY
      230       240       250       260       270       280        

      300       310       320       330       340       350        
pF1KB5 CHVPQSCDSLPRYETTHVFGRSLLRSIFTVTRRQLLEKFRVEKDKLVPEKRTLILTHFPK
       :.::: ::::::::::.::::.::::.::: ::::::. : :::::  ::::::::::::
CCDS26 CNVPQFCDSLPRYETTQVFGRTLLRSVFTVMRRQLLEQARQEKDKLPLEKRTLILTHFPK
      290       300       310       320       330       340        

      360       370       380           390       400          410 
pF1KB5 FLSMLEEEIYGANSPIWESGFTMPPSE----GTQLVPRPASVSAAVV---PSTPIFSPSM
       ::::::::.:. :::::.. :    :.    : : :  :  :....     :. . .:. 
CCDS26 FLSMLEEEVYSQNSPIWDQDFLSASSRTSQLGIQTVINPPPVAGTISYNSTSSSLEQPN-
      350       360       370       380       390       400        

             420       430       440       450       460       470 
pF1KB5 GGGSNSSLSLDSAGAEPMPGEKRTLPENLTLEDAKRLRVMGDIPMELVNEVMLTITDPAA
        .::.:     :.: :  ::::: . .. .::.::. ::::::::::.:::: :::::::
CCDS26 -AGSSSPACKASSGLEANPGEKRKMTDSHVLEEAKKPRVMGDIPMELINEVMSTITDPAA
        410       420       430       440       450       460      

             480       490       500       510       520       530 
pF1KB5 MLGPETSLLSANAARDETARLEERRGIIEFHVIGNSLTPKANRRVLLWLVGLQNVFSHQL
       ::::::..:::..::::.::::::::.:::::.::::. : :...:.:::::::::::::
CCDS26 MLGPETNFLSAHSARDEAARLEERRGVIEFHVVGNSLNQKPNKKILMWLVGLQNVFSHQL
        470       480       490       500       510       520      

             540       550       560       570       580       590 
pF1KB5 PRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYG
       ::::::::.:::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS26 PRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPSQGFTEIVFCAVTSNEQVKGYG
        530       540       550       560       570       580      

             600       610       620       630       640       650 
pF1KB5 THLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLM
       ::::::::::::::.:: ::::::::::::::::::::.::.::..:.::::::::::::
CCDS26 THLMNHLKEYHIKHDILNFLTYADEYAIGYFKKQGFSKEIKIPKTKYVGYIKDYEGATLM
        590       600       610       620       630       640      

             660       670       680       690       700       710 
pF1KB5 ECELNPRIPYTELSHIIKKQKEIIKKLIERKQAQIRKVYPGLSCFKEGVRQIPVESVPGI
        :::::::::::.: :::::::::::::::::::::::::::::::.::::::.::.:::
CCDS26 GCELNPRIPYTEFSVIIKKQKEIIKKLIERKQAQIRKVYPGLSCFKDGVRQIPIESIPGI
        650       660       670       680       690       700      

             720       730       740       750       760       770 
pF1KB5 RETGWKPLGKEKGKELKDPDQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRF
       ::::::: ::::.:: .::::::.:::..: :.::: ::::::::::..::: :::::::
CCDS26 RETGWKPSGKEKSKEPRDPDQLYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRF
        710       720       730       740       750       760      

             780       790       800       810       820       830 
pF1KB5 PIDLKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKE
       :.:::::.:::..::::..:::.::::::..::.:::::.::: .::. :::::. :.::
CCDS26 PMDLKTMSERLKNRYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKE
        770       780       790       800       810       820      

             
pF1KB5 GGLIDK
       .:::::
CCDS26 AGLIDK
        830  




837 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 16:23:55 2016 done: Sat Nov  5 16:23:56 2016
 Total Scan time:  4.790 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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