GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:04:50

Sequence gi568815589f:107183630_107429653 : 246024 bp : 42.48% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5151   5352  202  2  1   42   67   118 0.365   4.19
 1.02 Term +   5566   5855  290  2  2   42   43   190 0.850   4.45
 1.03 PlyA +   6152   6157    6                               1.05

 2.00 Prom +   6967   7006   40                              -5.55
 2.01 Init +   7695   7753   59  2  2   54  110     6 0.499   0.23
 2.02 Intr +  13504  13638  135  1  0   55   33   134 0.200   3.36
 2.03 Intr +  22093  22179   87  1  0   88   72    92 0.142   5.77
 2.04 Intr +  27206  27382  177  2  0   15   35   169 0.039   2.41
 2.05 Intr +  33197  33276   80  2  2   96   89    44 0.223   3.58
 2.06 Intr +  35771  35964  194  0  2   48  119    84 0.085   5.79
 2.07 Term +  44185  44208   24  0  0  103   44    37 0.153  -1.95
 2.08 PlyA +  44936  44941    6                              -0.45

 3.00 Prom +  46093  46132   40                              -0.95
 3.01 Init +  69243  69357  115  2  1   74   92   113 0.768  10.72
 3.02 Intr +  72473  72513   41  0  2   77   82    27 0.185  -1.98
 3.03 Term +  84792  84857   66  2  0  116   39    97 0.290   4.56
 3.04 PlyA +  85948  85953    6                               1.05

 4.00 Prom +  98033  98072   40                              -4.45
 4.01 Init + 100001 100066   66  1  0  107   80   100 0.238  12.22
 4.02 Intr + 100218 100424  207  2  0   35   75   105 0.685   2.25
 4.03 Intr + 116512 116593   82  0  1   87   80    97 0.866   7.09
 4.04 Intr + 118406 118485   80  0  2   72  106   127 0.986  11.25
 4.05 Intr + 122750 123018  269  1  2   53   91   284 0.936  20.61
 4.06 Intr + 128053 128108   56  1  2   64  111    59 0.800   3.50
 4.07 Intr + 135123 135250  128  1  2  104   81   154 0.998  15.78
 4.08 Intr + 138354 138489  136  2  1   37   88   154 0.985   9.52
 4.09 Intr + 140261 140388  128  0  2   47   62    60 0.771  -1.22
 4.10 Intr + 141205 141375  171  0  0   72   96   226 0.985  21.02
 4.11 Intr + 146923 146946   24  0  0  111   72    25 0.006   0.50
 4.12 Intr + 153788 153880   93  1  0   62   93    78 0.111   4.94
 4.13 Intr + 154834 155031  198  0  0  111   55   108 0.309   8.43
 4.14 Term + 164504 164734  231  1  0  -14   49   200 0.022   1.39
 4.15 PlyA + 164947 164952    6                               1.05

 5.00 Prom + 174094 174133   40                              -4.65
 5.01 Init + 175271 175591  321  1  0   86   18   232 0.913  13.59
 5.02 Intr + 176348 176458  111  1  0   39  101   121 0.918   8.16
 5.03 Intr + 183976 184098  123  0  0  100   47    48 0.097   1.76
 5.04 Intr + 188692 188795  104  0  2  107  103    68 0.828   8.25
 5.05 Intr + 195557 195601   45  2  0   89   63    84 0.355   2.61
 5.06 Intr + 205439 205576  138  2  0   86   77    82 0.075   5.56
 5.07 Intr + 210339 210421   83  0  2   57   48    97 0.085   0.96
 5.08 Intr + 220658 220820  163  0  1   27   93   145 0.048   7.01
 5.09 Intr + 226614 226758  145  0  1   48   99    76 0.073   4.06
 5.10 Term + 242289 242444  156  2  0   50   48   186 0.029   7.75
 5.11 PlyA + 243473 243478    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 145914 146027  114  2  0  101   48   113 0.976   6.19
S.002 Init + 157264 157421  158  0  2   71   86   139 0.819   9.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:107183630_107429653|GENSCAN_predicted_peptide_1|163_aa
MYRLGETLTIDIHDLNCVCRCPIRGDGIKYLLKLLGPCKICQILKEMEKGLIKSSGDTRK
ETRGTAGNIEGTIRAPIVKTCLNFQWDLICLCCTVVSQPHGEGQLDPHWNQLCLQQQTPT
GNDPPGGRPNPPRRPARDRPDIHLVEEEDEKKLAMPSTDTEIP

>gi568815589f:107183630_107429653|GENSCAN_predicted_CDS_1|492_bp
atgtataggctaggagagactctcaccatcgacattcatgacctcaactgtgtttgccgg
tgcccaattagaggtgatggtataaagtacctgctaaagttgttaggaccatgcaaaatt
tgccagatactaaaagagatggagaagggactgataaaaagcagcggtgacacaaggaag
gaaacaaggggaacagcaggtaacattgaaggaactatcagagcccccatagtaaagacc
tgcttgaattttcagtgggatctaatatgcctttgctgtactgtggtatctcagccacat
ggagaagggcagctggatcctcactggaaccagctatgtctccagcaacagacacccaca
ggtaatgacccacctggaggaagacccaatcccccaagacgacctgccagagacaggcca
gacatccatcttgtagaagaagaggatgagaaaaagctagccatgccctccactgacact
gaaatcccttag

>gi568815589f:107183630_107429653|GENSCAN_predicted_peptide_2|251_aa
MPDLNVGSGDHFPVFYHFSRLYRKHDAGIYLAAGEASGNTIMAEGEVGAGTSYMAGTTAR
ERGGSPMMSDIPLSAGETGEVIKEKAILILGFEGLFRKDIIKGSQVREKGYSARSTPQEA
LLNFSYVIIRCSPTTWRHVHRLLLVITMTQRPRYVWRVKDAGEADNLGNEWLINMPNSTD
SFSTINLVGLYPAWTCCKALSCSGSTPKGFPPNSKQLTKHHDSFSVVGGCEVQLLVTYLK
KHVLRYVAIYS

>gi568815589f:107183630_107429653|GENSCAN_predicted_CDS_2|756_bp
atgccagatctgaatgtgggaagtggagaccatttccctgttttttaccatttctccagg
ctgtacaggaagcatgatgctggcatctacttggctgctggggaagcctcaggaaacaca
atcatggcggaaggtgaagtgggagcaggcacatcttacatggcaggaacaacagcaaga
gagagaggggggagccctatgatgagtgacatcccactttcagctggagagactggggaa
gtcatcaaggaaaaggcaattctaattttgggctttgaaggacttttcagaaaagacatc
ataaaagggagccaggtcagagaaaaaggctattcagccaggtccactcctcaggaagcc
ttgctgaatttctcctatgtcatcatccgttgttcacctactacctggaggcacgtgcac
aggcttttgctagtcatcacaatgactcagcggcctagatatgtgtggagagtgaaggat
gctggagaagcagataacttggggaatgaatggttgataaacatgcccaacagcacagac
tcctttagcaccattaacctcgttggcttatatccagcctggacctgctgcaaagctctc
tcttgctctggcagtactcccaagggcttccctccaaattctaagcagcttaccaagcac
catgactctttctcagtggtaggaggatgcgaagtgcaactacttgtcacttatctcaaa
aagcatgtcctgcgttatgtggccatctacagctga

>gi568815589f:107183630_107429653|GENSCAN_predicted_peptide_3|73_aa
MALDNSNEKTREKGRLSKKLVMAEPFKQGRRMDVQKDGEGDLAGSWDNSGGKPTQHEDDE
DEDLYNDPLSLNE

>gi568815589f:107183630_107429653|GENSCAN_predicted_CDS_3|222_bp
atggctttggataattccaatgagaagacaagagagaaggggagactctcaaagaaacta
gtgatggcagagccctttaagcaaggacgtagaatggatgttcaaaaagatggagagggg
gatttggcagggtcatgggacaatagtggagggaagcccactcaacatgaagatgatgag
gatgaagacctttataatgatccactttcacttaatgaatag

>gi568815589f:107183630_107429653|GENSCAN_predicted_peptide_4|622_aa
MQVTLKTLQQQTFKIDIDPEETRSRSSCLGRGLCGRRMGKQWPDAEGLVADGVERTPAGL
GLGARASGAGGGWEGPGRLSRRAWLSGMGAQVKALKEKIESEKGKDAFPVAGQKLIYAGK
ILNDDTALKEYKIDEKNFVVVMVTKPKAVSTPAPATTQQSAPASTTAVTSSTTTTVAQAP
TPVPALAPTSTPASITPASATASSEPAPASAAKQEKPAEKPAETPVATSPTATDSTSGDS
SRSNLFEDATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPG
DRESQAVVDPPQAASTGAPQSSAVAAAAATTTATTTTTSSGGHPLEFLRNQPQFQQMRQI
IQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGSGGIAE
AGSGHMNYIQVTPQEKEAIERQKRVYQQVLLLSICHKSEHPELGLSAFGVSLKVLNERKL
ATGLAAASNLQVKFGREPSNPVKQNAHCCSFPSRGTVSSQCFLLISSDSLAALPEAQELK
IGKGLKGDLEQALPGRAVLHLAEVAGPSYSTRQPPPLSQQVWLPQEAQEFRQDFCLQLGH
KSFHEEGPEWWSPCLSPPLTAV

>gi568815589f:107183630_107429653|GENSCAN_predicted_CDS_4|1869_bp
atgcaggtcaccctgaagaccctccagcagcagaccttcaagatagacattgaccccgag
gagacgcggagccgatcctcctgtcttggccgtgggctttgtggcaggagaatggggaag
cagtggccggacgccgaaggcctggtggcagatggcgtggagcgcacgcccgcgggcctg
ggcctaggagctcgtgctagcggggccggagggggatgggaaggtccaggccgtctcagc
cgtagagcctggctttctggtatgggtgcacaggtgaaagcactgaaagagaagattgaa
tctgaaaaggggaaagatgcctttccagtagcaggtcaaaaattaatttatgcaggcaaa
atcctcaatgatgatactgctctcaaagaatataaaattgatgagaaaaactttgtggtg
gttatggtgaccaaacccaaagcagtgtccacaccagcaccagctacaactcagcagtca
gctcctgccagcactacagcagttacttcctccaccaccacaactgtggctcaggctcca
acccctgtccctgccttggcccccacttccacacctgcatccatcactccagcatcagcg
acagcatcttctgaacctgcacctgctagtgcagctaaacaagagaagcctgcagaaaag
ccagcagagacaccagtggctactagcccaacagcaactgacagtacatcgggtgattct
tctcggtcaaacctttttgaagatgcaacgagtgcacttgtgacgggtcagtcttacgag
aatatggtaactgagatcatgtcaatgggctatgaacgagagcaagtaattgcagccctg
agagccagtttcaacaaccctgacagagcagtggagtatcttttaatgggaatccctgga
gatagagaaagtcaggctgtggttgacccccctcaagcagctagtactggggctcctcag
tcttcagcagtggctgcagctgcagcaactacgacagcaacaactacaacaacaagttct
ggaggacatccccttgaatttttacggaatcagcctcagtttcaacagatgagacaaatt
attcagcagaatccttccttgcttccagcgttactacagcagataggtcgagagaatcct
caattacttcagcaaattagccaacaccaggagcattttattcagatgttaaatgaacca
gttcaagaagctggtggtcaaggaggaggaggtggaggtggcagtggaggaattgcagaa
gctggaagtggtcatatgaactacattcaagtaacacctcaggaaaaagaagctatagaa
aggcagaaacgtgtttatcagcaagtcctgcttctaagtatctgccataaaagtgaacac
cctgaactgggattatctgcatttggtgtatcactgaaggtactgaacgagagaaaactg
gccacaggattggcagctgcatccaacctccaggtcaaatttggcagagaaccaagcaat
cctgtcaaacagaatgcccactgctgctccttcccatctcgaggaactgtctcttctcaa
tgttttcttttgatttcctctgacagtcttgctgctcttccagaggcacaggaactcaaa
attgggaagggtttgaagggagacctggagcaagctctgcctggcagagctgtcctacac
ctggcagaagtggctgggccttcatactcgacccgccagcccccaccactcagtcagcag
gtatggctcccccaggaagcacaagagttcaggcaggacttctgtctgcaactgggccac
aagtccttccatgaagaggggcctgaatggtggtctccatgtctatcaccacctctgaca
gcagtttga

>gi568815589f:107183630_107429653|GENSCAN_predicted_peptide_5|462_aa
MIAAVAVVVVVAVSGYSLVCSCGPGRLPAAEIWSGPRKGLPRAGFVWKLRLGVGSQWQPC
MDNAVIAAFPAVGHGDSPENEVGSVNIEPNYANELKQETQLQRCRDTAGAEDAVQEHKQQ
HSFEAQMPENDTKWGAFPTPAWTMVVTQARMQVFIPVGSLYSSRLHQDLCAPSWGSQPAP
AWGARRLSRHQLHRENLDAQQGQHFQRCTLTRGPHTRLKWTDSDNGQKSISTNNCTVPAV
SEKLRKRAADFTQSLLDHLPLPSPWQLRGNTCVSSTVKWRCEREGGKGQPDATEALVNDC
ASTLSLNGVLPEGLKLSLCLDPAVNCQEIQRTEEHEELHRKYTISKIQAVDPPQVKQPGS
VNWSLLSKTSETRLGFGLGAEEERTTHKITDLLMRHNLMCKGTNRTGQAQERNTVIKATT
MDASPLPSPYFCAFQWHPQNSVTTLHYWRTLEGPRVGRLLEE

>gi568815589f:107183630_107429653|GENSCAN_predicted_CDS_5|1389_bp
atgatcgctgctgttgccgttgttgttgttgtggctgtgtctgggtatagcctggtttgc
agttgtggcccaggccgacttccagctgcagagatctggagcggcccaaggaaggggctc
cccagggctgggtttgtttggaagctgcgtctcggtgtgggctcccagtggcaaccctgc
atggataatgctgtaattgcagccttcccagctgtcggccatggagacagcccagaaaat
gaggttggctcagtaaatattgaaccaaattatgcaaatgagctcaaacaagagactcag
ctgcagagatgcagagacacggcaggagctgaagatgctgtacaggaacacaagcagcag
cactcctttgaggcccagatgcctgagaatgatacaaagtggggagccttccctacccct
gcatggacaatggttgtcactcaggcaagaatgcaggtgttcattccggtgggctcgctt
tattcttccagactgcatcaggatctgtgtgctccttcttggggctcccagccagcccct
gcatggggtgccaggaggctctccaggcatcagcttcacagagagaatcttgatgcccaa
caaggacagcattttcagagatgtacccttacaaggggtccccatacaagattgaaatgg
actgattccgacaacgggcagaagagcatttccactaacaactgcacagtcccagctgtt
tctgaaaagctgcgcaagagagcagctgacttcacccagtctctgctggaccaccttcct
cttccatccccctggcagctaagaggaaacacatgtgtctcctcaactgtaaaatggaga
tgtgaaagggagggtggcaagggacagcctgatgctacagaggccctagtaaacgattgt
gcatctacactaagtctcaacggtgtcctgccagagggattaaagctgagcctgtgtcta
gatccagctgtcaattgccaggaaatacaaaggacagaggaacatgaagaactacaccga
aagtacacaatcagcaaaatccaggctgtggaccctccacaagtcaaacagcctgggtcc
gtcaactggagcctcctatctaagacatctgagacaagactgggatttggtctcggagca
gaggaggagaggactactcacaaaatcacagaccttctgatgagacataacctgatgtgt
aaaggtactaacaggaccggacaagcccaggagcgcaataccgtcataaaggcaacaaca
atggacgcctcgcctctgccctctccatatttctgtgctttccaatggcatccccaaaac
agtgtgacaacgcttcactactggaggaccctggagggacctagagttggccgattgcta
gaggagtaa