Result of FASTA (omim) for pF1KB9843
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9843, 366 aa
  1>>>pF1KB9843 366 - 366 aa - 366 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1132+/-0.00047; mu= 17.4770+/- 0.029
 mean_var=93.8031+/-23.823, 0's: 0 Z-trim(109.1): 574  B-trim: 1879 in 2/51
 Lambda= 0.132424
 statistics sampled from 16541 (17247) to 16541 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.535), E-opt: 0.2 (0.202), width:  16
 Scan time:  6.520

The best scores are:                                      opt bits E(85289)
NP_001309137 (OMIM: 182134) 5-hydroxytryptamine re ( 366) 2385 466.7 3.7e-131
XP_005264808 (OMIM: 182134) PREDICTED: 5-hydroxytr ( 366) 2385 466.7 3.7e-131
XP_011531966 (OMIM: 182134) PREDICTED: 5-hydroxytr ( 366) 2385 466.7 3.7e-131
NP_001309139 (OMIM: 182134) 5-hydroxytryptamine re ( 366) 2385 466.7 3.7e-131
NP_000857 (OMIM: 182134) 5-hydroxytryptamine recep ( 366) 2385 466.7 3.7e-131
NP_001309138 (OMIM: 182134) 5-hydroxytryptamine re ( 366) 2385 466.7 3.7e-131
XP_011534091 (OMIM: 182132) PREDICTED: 5-hydroxytr ( 365) 1320 263.2 6.5e-70
NP_000856 (OMIM: 182132) 5-hydroxytryptamine recep ( 365) 1320 263.2 6.5e-70
NP_000854 (OMIM: 182131) 5-hydroxytryptamine recep ( 390) 1139 228.7 1.7e-59
NP_000855 (OMIM: 182133) 5-hydroxytryptamine recep ( 377) 1086 218.6 1.9e-56
NP_387512 (OMIM: 126451,181500,190300) D(3) dopami ( 367)  656 136.4   1e-31
NP_000515 (OMIM: 109760,614674) 5-hydroxytryptamin ( 422)  646 134.5 4.1e-31
NP_001307687 (OMIM: 601122) 5-hydroxytryptamine re ( 439)  571 120.2 8.7e-27
XP_006712545 (OMIM: 601122) PREDICTED: 5-hydroxytr ( 456)  571 120.3   9e-27
NP_000858 (OMIM: 601122) 5-hydroxytryptamine recep ( 481)  571 120.3 9.3e-27
NP_000675 (OMIM: 109630,607276) beta-1 adrenergic  ( 477)  566 119.3 1.8e-26
NP_062874 (OMIM: 182137) 5-hydroxytryptamine recep ( 432)  517 109.9 1.1e-23
NP_000863 (OMIM: 182137) 5-hydroxytryptamine recep ( 445)  517 109.9 1.1e-23
NP_062873 (OMIM: 182137) 5-hydroxytryptamine recep ( 479)  517 110.0 1.2e-23
XP_005265876 (OMIM: 104220) PREDICTED: alpha-1B ad ( 328)  501 106.7 7.6e-23
XP_006714884 (OMIM: 104220) PREDICTED: alpha-1B ad ( 331)  501 106.7 7.7e-23
XP_005265875 (OMIM: 104220) PREDICTED: alpha-1B ad ( 366)  501 106.8 8.2e-23
XP_011532740 (OMIM: 104220) PREDICTED: alpha-1B ad ( 389)  501 106.8 8.5e-23
XP_011532739 (OMIM: 104220) PREDICTED: alpha-1B ad ( 402)  501 106.8 8.7e-23
NP_000670 (OMIM: 104220) alpha-1B adrenergic recep ( 520)  501 106.9   1e-22
XP_011532737 (OMIM: 104220) PREDICTED: alpha-1B ad ( 556)  501 107.0 1.1e-22
NP_076917 (OMIM: 601305) 5-hydroxytryptamine recep ( 357)  477 102.2 1.9e-21
NP_000674 (OMIM: 104250) alpha-2C adrenergic recep ( 462)  468 100.6 7.6e-21
NP_000672 (OMIM: 104210) alpha-2A adrenergic recep ( 465)  466 100.2 9.9e-21
XP_011542714 (OMIM: 104221) PREDICTED: alpha-1A ad ( 308)  462 99.2 1.3e-20
XP_016868585 (OMIM: 104221) PREDICTED: alpha-1A ad ( 317)  462 99.3 1.3e-20
XP_011542713 (OMIM: 104221) PREDICTED: alpha-1A ad ( 324)  462 99.3 1.3e-20
NP_001309433 (OMIM: 104221) alpha-1A adrenergic re ( 342)  462 99.3 1.4e-20
NP_001309432 (OMIM: 104221) alpha-1A adrenergic re ( 370)  462 99.3 1.4e-20
NP_001309431 (OMIM: 104221) alpha-1A adrenergic re ( 372)  462 99.3 1.5e-20
XP_006716356 (OMIM: 104221) PREDICTED: alpha-1A ad ( 429)  462 99.4 1.6e-20
NP_150645 (OMIM: 104221) alpha-1A adrenergic recep ( 429)  462 99.4 1.6e-20
NP_150647 (OMIM: 104221) alpha-1A adrenergic recep ( 455)  462 99.4 1.7e-20
NP_000671 (OMIM: 104221) alpha-1A adrenergic recep ( 466)  462 99.4 1.7e-20
NP_150646 (OMIM: 104221) alpha-1A adrenergic recep ( 475)  462 99.5 1.7e-20
XP_006716355 (OMIM: 104221) PREDICTED: alpha-1A ad ( 475)  462 99.5 1.7e-20
XP_016868584 (OMIM: 104221) PREDICTED: alpha-1A ad ( 475)  462 99.5 1.7e-20
XP_016868583 (OMIM: 104221) PREDICTED: alpha-1A ad ( 475)  462 99.5 1.7e-20
XP_005246577 (OMIM: 601122) PREDICTED: 5-hydroxytr ( 362)  447 96.5   1e-19
NP_000673 (OMIM: 104260,607876) alpha-2B adrenergi ( 450)  436 94.5 5.2e-19
NP_000730 (OMIM: 118493) muscarinic acetylcholine  ( 466)  428 92.9 1.5e-18
NP_001006629 (OMIM: 118493) muscarinic acetylcholi ( 466)  428 92.9 1.5e-18
XP_011514071 (OMIM: 118493) PREDICTED: muscarinic  ( 466)  428 92.9 1.5e-18
NP_001006633 (OMIM: 118493) muscarinic acetylcholi ( 466)  428 92.9 1.5e-18
NP_001006632 (OMIM: 118493) muscarinic acetylcholi ( 466)  428 92.9 1.5e-18


>>NP_001309137 (OMIM: 182134) 5-hydroxytryptamine recept  (366 aa)
 initn: 2385 init1: 2385 opt: 2385  Z-score: 2475.8  bits: 466.7 E(85289): 3.7e-131
Smith-Waterman score: 2385; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)

               10        20        30        40        50        60
pF1KB9 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
              310       320       330       340       350       360

             
pF1KB9 LVRCRC
       ::::::
NP_001 LVRCRC
             

>>XP_005264808 (OMIM: 182134) PREDICTED: 5-hydroxytrypta  (366 aa)
 initn: 2385 init1: 2385 opt: 2385  Z-score: 2475.8  bits: 466.7 E(85289): 3.7e-131
Smith-Waterman score: 2385; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)

               10        20        30        40        50        60
pF1KB9 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
              310       320       330       340       350       360

             
pF1KB9 LVRCRC
       ::::::
XP_005 LVRCRC
             

>>XP_011531966 (OMIM: 182134) PREDICTED: 5-hydroxytrypta  (366 aa)
 initn: 2385 init1: 2385 opt: 2385  Z-score: 2475.8  bits: 466.7 E(85289): 3.7e-131
Smith-Waterman score: 2385; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)

               10        20        30        40        50        60
pF1KB9 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
              310       320       330       340       350       360

             
pF1KB9 LVRCRC
       ::::::
XP_011 LVRCRC
             

>>NP_001309139 (OMIM: 182134) 5-hydroxytryptamine recept  (366 aa)
 initn: 2385 init1: 2385 opt: 2385  Z-score: 2475.8  bits: 466.7 E(85289): 3.7e-131
Smith-Waterman score: 2385; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)

               10        20        30        40        50        60
pF1KB9 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
              310       320       330       340       350       360

             
pF1KB9 LVRCRC
       ::::::
NP_001 LVRCRC
             

>>NP_000857 (OMIM: 182134) 5-hydroxytryptamine receptor   (366 aa)
 initn: 2385 init1: 2385 opt: 2385  Z-score: 2475.8  bits: 466.7 E(85289): 3.7e-131
Smith-Waterman score: 2385; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)

               10        20        30        40        50        60
pF1KB9 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
              310       320       330       340       350       360

             
pF1KB9 LVRCRC
       ::::::
NP_000 LVRCRC
             

>>NP_001309138 (OMIM: 182134) 5-hydroxytryptamine recept  (366 aa)
 initn: 2385 init1: 2385 opt: 2385  Z-score: 2475.8  bits: 466.7 E(85289): 3.7e-131
Smith-Waterman score: 2385; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366)

               10        20        30        40        50        60
pF1KB9 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQK
              310       320       330       340       350       360

             
pF1KB9 LVRCRC
       ::::::
NP_001 LVRCRC
             

>>XP_011534091 (OMIM: 182132) PREDICTED: 5-hydroxytrypta  (365 aa)
 initn: 1326 init1: 650 opt: 1320  Z-score: 1376.2  bits: 263.2 E(85289): 6.5e-70
Smith-Waterman score: 1320; 57.0% identity (80.0% similar) in 365 aa overlap (10-365:5-362)

               10        20            30        40        50      
pF1KB9 MDFLNSSDQNLTSEELLNRMPS----KILVSLTLSGLALMTTTINSLVIAAIIVTRKLHH
                : :.:  .   :.    :.:. .::  .. .:: .:  :: :: .:.:::.
XP_011      MNITNCTTEASMAIRPKTITEKMLICMTLVVITTLTTLLNLAVIMAIGTTKKLHQ
                    10        20        30        40        50     

         60        70        80        90       100       110      
pF1KB9 PANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSA
       :::::::::::::.::::::::.::.::: . : .:  .:..:::::.:::::::::: .
XP_011 PANYLICSLAVTDLLVAVLVMPLSIIYIVMDRWKLGYFLCEVWLSVDMTCCTCSILHLCV
          60        70        80        90       100       110     

        120       130       140       150       160         170    
pF1KB9 IALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWR-HQGTSRD-DECII
       :::::: :::.:.::::::: :.:..::  :: ::.:::::::::: :.  :   ..: :
XP_011 IALDRYWAITNAIEYARKRTAKRAALMILTVWTISIFISMPPLFWRSHRRLSPPPSQCTI
         120       130       140       150       160       170     

          180       190       200       210        220       230   
pF1KB9 KHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASR-IAKEEVNGQVLLES
       .:::.. :::::.:::::::.:::::::.::.:::.::.:: .:: .... ...:    .
XP_011 QHDHVIYTIYSTLGAFYIPLTLILILYYRIYHAAKSLYQKRGSSRHLSNRSTDSQ----N
         180       190       200       210       220       230     

           240       250       260         270       280       290 
pF1KB9 GEKSTKSVSTSYVLEKSLSDPSTDFDKIHSTVR--SLRSEFKHEKSWRRQKISGTRERKA
       .  : : ..:  : . : :::.:.:.:.:...:   . ... :    .::.::.::::::
XP_011 SFASCKLTQTFCVSDFSTSDPTTEFEKFHASIRIPPFDNDLDHPG--ERQQISSTRERKA
             240       250       260       270         280         

             300       310       320       330       340       350 
pF1KB9 ATTLGLILGAFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFN
       :  ::::::::.. :::::.:::.:.. .   .: :...::.::::.:::::::.:: ::
XP_011 ARILGLILGAFILSWLPFFIKELIVGL-SIYTVSSEVADFLTWLGYVNSLINPLLYTSFN
     290       300       310        320       330       340        

             360        
pF1KB9 EDFKKAFQKLVRCRC  
       :::: ::.::.:::   
XP_011 EDFKLAFKKLIRCREHT
      350       360     

>>NP_000856 (OMIM: 182132) 5-hydroxytryptamine receptor   (365 aa)
 initn: 1326 init1: 650 opt: 1320  Z-score: 1376.2  bits: 263.2 E(85289): 6.5e-70
Smith-Waterman score: 1320; 57.0% identity (80.0% similar) in 365 aa overlap (10-365:5-362)

               10        20            30        40        50      
pF1KB9 MDFLNSSDQNLTSEELLNRMPS----KILVSLTLSGLALMTTTINSLVIAAIIVTRKLHH
                : :.:  .   :.    :.:. .::  .. .:: .:  :: :: .:.:::.
NP_000      MNITNCTTEASMAIRPKTITEKMLICMTLVVITTLTTLLNLAVIMAIGTTKKLHQ
                    10        20        30        40        50     

         60        70        80        90       100       110      
pF1KB9 PANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSA
       :::::::::::::.::::::::.::.::: . : .:  .:..:::::.:::::::::: .
NP_000 PANYLICSLAVTDLLVAVLVMPLSIIYIVMDRWKLGYFLCEVWLSVDMTCCTCSILHLCV
          60        70        80        90       100       110     

        120       130       140       150       160         170    
pF1KB9 IALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWR-HQGTSRD-DECII
       :::::: :::.:.::::::: :.:..::  :: ::.:::::::::: :.  :   ..: :
NP_000 IALDRYWAITNAIEYARKRTAKRAALMILTVWTISIFISMPPLFWRSHRRLSPPPSQCTI
         120       130       140       150       160       170     

          180       190       200       210        220       230   
pF1KB9 KHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASR-IAKEEVNGQVLLES
       .:::.. :::::.:::::::.:::::::.::.:::.::.:: .:: .... ...:    .
NP_000 QHDHVIYTIYSTLGAFYIPLTLILILYYRIYHAAKSLYQKRGSSRHLSNRSTDSQ----N
         180       190       200       210       220       230     

           240       250       260         270       280       290 
pF1KB9 GEKSTKSVSTSYVLEKSLSDPSTDFDKIHSTVR--SLRSEFKHEKSWRRQKISGTRERKA
       .  : : ..:  : . : :::.:.:.:.:...:   . ... :    .::.::.::::::
NP_000 SFASCKLTQTFCVSDFSTSDPTTEFEKFHASIRIPPFDNDLDHPG--ERQQISSTRERKA
             240       250       260       270         280         

             300       310       320       330       340       350 
pF1KB9 ATTLGLILGAFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFN
       :  ::::::::.. :::::.:::.:.. .   .: :...::.::::.:::::::.:: ::
NP_000 ARILGLILGAFILSWLPFFIKELIVGL-SIYTVSSEVADFLTWLGYVNSLINPLLYTSFN
     290       300       310        320       330       340        

             360        
pF1KB9 EDFKKAFQKLVRCRC  
       :::: ::.::.:::   
NP_000 EDFKLAFKKLIRCREHT
      350       360     

>>NP_000854 (OMIM: 182131) 5-hydroxytryptamine receptor   (390 aa)
 initn: 1109 init1: 617 opt: 1139  Z-score: 1188.9  bits: 228.7 E(85289): 1.7e-59
Smith-Waterman score: 1139; 48.2% identity (75.6% similar) in 365 aa overlap (5-366:32-388)

                                         10        20        30    
pF1KB9                           MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLA
                                     : : ..   .. .. .: :.:. . :. ..
NP_000 EEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSIS-LPWKVLLVMLLALIT
              10        20        30        40         50        60

           40        50        60        70        80        90    
pF1KB9 LMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQV
       : ::  :..:::..  ::::: :::::: ::::::.::..::::.: .: :   : .:::
NP_000 LATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQV
               70        80        90       100       110       120

          100       110       120       130       140       150    
pF1KB9 VCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFI
       :::.::: :::::: ::::: .:::::: ::::::::. :::::.:..::..::..:. :
NP_000 VCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISI
              130       140       150       160       170       180

          160        170       180       190       200       210   
pF1KB9 SMPPLFWRHQGTSRD-DECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYH
       :.::.:::.  . .. .::... :::. :.::: ::::.:  :.. :: .::  :..   
NP_000 SLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
              190       200       210       220       230       240

           220       230       240       250        260       270  
pF1KB9 KRQASRIAKEEVNGQVLLESGEKSTKSVSTSYVLEKSLSD-PSTDFDKIHSTVRSLRSEF
       :.  .: .:. . .:.. .:   ::.::..   ... . : :: . . .. .  ..:   
NP_000 KQTPNRTGKRLTRAQLITDS-PGSTSSVTS---INSRVPDVPSESGSPVYVNQVKVRVS-
              250       260           270       280       290      

            280       290       300       310        320       330 
pF1KB9 KHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVC-DKCKISEEMSNF
         .   ...:. ..:::::. :::.:::::..::::::.  ::. .: : : .   . .:
NP_000 --DALLEKKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDF
           300       310       320       330       340       350   

             340       350       360        
pF1KB9 LAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC  
       ..:::::::::::.:::. :::::.::.::.: .:  
NP_000 FTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS
           360       370       380       390

>>NP_000855 (OMIM: 182133) 5-hydroxytryptamine receptor   (377 aa)
 initn: 1050 init1: 591 opt: 1086  Z-score: 1134.4  bits: 218.6 E(85289): 1.9e-56
Smith-Waterman score: 1086; 50.4% identity (77.4% similar) in 345 aa overlap (23-365:38-374)

                       10        20        30        40        50  
pF1KB9         MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTR
                                     :: ....:: ..: :.  :..:...:..::
NP_000 AEGLPQEASNRSLNATETSEAWDPRTLQALKISLAVVLSVITLATVLSNAFVLTTILLTR
        10        20        30        40        50        60       

             60        70        80        90       100       110  
pF1KB9 KLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSIL
       ::: :::::: :::.::.::..::::.::.: . ..: .::..:::::: :::::: :::
NP_000 KLHTPANYLIGSLATTDLLVSILVMPISIAYTITHTWNFGQILCDIWLSSDITCCTASIL
        70        80        90       100       110       120       

            120       130       140       150       160        170 
pF1KB9 HLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRD-DE
       :: .:::::: :::::.::...::  ::. ::.::: ::. ::.::::::.  .... ..
NP_000 HLCVIALDRYWAITDALEYSKRRTAGHAATMIAIVWAISICISIPPLFWRQAKAQEEMSD
       130       140       150       160       170       180       

             180       190       200       210       220       230 
pF1KB9 CIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLL
       :... ..:  ::::: :::::: .:..::: .:::::..   .   :  .:. ...... 
NP_000 CLVNTSQISYTIYSTCGAFYIPSVLLIILYGRIYRAARNRILN-PPSLYGKRFTTAHLIT
       190       200       210       220       230        240      

             240       250       260       270       280       290 
pF1KB9 ESGEKSTKSVSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKA
        :. .:  :...:    .: :  :  : . :  ..   : ..      :..::..:::::
NP_000 GSAGSSLCSLNSSLHEGHSHSAGSPLFFN-HVKIKLADSALE------RKRISAARERKA
        250       260       270        280             290         

             300       310        320       330       340       350
pF1KB9 ATTLGLILGAFVICWLPFFVKELVVNVC-DKCKISEEMSNFLAWLGYLNSLINPLIYTIF
       .  ::.:::::.::::::::  ::. .: :.: :   . .:..:::::::::::.:::.:
NP_000 TKILGIILGAFIICWLPFFVVSLVLPICRDSCWIHPALFDFFTWLGYLNSLINPIIYTVF
     300       310       320       330       340       350         

              360        
pF1KB9 NEDFKKAFQKLVRCRC  
       ::.:..::::.:  :   
NP_000 NEEFRQAFQKIVPFRKAS
     360       370       




366 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 19:40:50 2016 done: Fri Nov  4 19:40:51 2016
 Total Scan time:  6.520 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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