Result of FASTA (omim) for pF1KB9833
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9833, 345 aa
  1>>>pF1KB9833 345 - 345 aa - 345 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.8072+/-0.000347; mu= -7.3312+/- 0.022
 mean_var=300.5578+/-62.373, 0's: 0 Z-trim(123.6): 19  B-trim: 2334 in 1/60
 Lambda= 0.073979
 statistics sampled from 43597 (43616) to 43597 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.786), E-opt: 0.2 (0.511), width:  16
 Scan time:  8.520

The best scores are:                                      opt bits E(85289)
NP_001230806 (OMIM: 605523) protein Tob1 isoform 1 ( 345) 2334 261.8 1.6e-69
NP_005740 (OMIM: 605523) protein Tob1 isoform 1 [H ( 345) 2334 261.8 1.6e-69
NP_001230814 (OMIM: 605523) protein Tob1 isoform 2 ( 206) 1386 160.5   3e-39
XP_016884028 (OMIM: 607396) PREDICTED: protein Tob ( 344) 1159 136.4 8.8e-32
XP_006724168 (OMIM: 607396) PREDICTED: protein Tob ( 344) 1159 136.4 8.8e-32
XP_005261372 (OMIM: 607396) PREDICTED: protein Tob ( 344) 1159 136.4 8.8e-32
NP_057356 (OMIM: 607396) protein Tob2 [Homo sapien ( 344) 1159 136.4 8.8e-32
NP_001722 (OMIM: 109580) protein BTG1 [Homo sapien ( 171)  363 51.2 1.9e-06
NP_006754 (OMIM: 601597) protein BTG2 [Homo sapien ( 158)  352 50.0   4e-06
XP_016883755 (OMIM: 605674) PREDICTED: protein BTG ( 252)  302 44.8 0.00023
NP_006797 (OMIM: 605674) protein BTG3 isoform b [H ( 252)  302 44.8 0.00023
XP_016883754 (OMIM: 605674) PREDICTED: protein BTG ( 252)  302 44.8 0.00023
NP_060059 (OMIM: 605673) protein BTG4 [Homo sapien ( 223)  263 40.6  0.0038
XP_011541182 (OMIM: 605673) PREDICTED: protein BTG ( 226)  263 40.7  0.0039
XP_011541181 (OMIM: 605673) PREDICTED: protein BTG ( 244)  263 40.7  0.0041
XP_011541180 (OMIM: 605673) PREDICTED: protein BTG ( 255)  263 40.7  0.0042
XP_011541178 (OMIM: 605673) PREDICTED: protein BTG ( 273)  263 40.7  0.0045
NP_001124386 (OMIM: 605674) protein BTG3 isoform a ( 296)  257 40.1  0.0074
XP_011527743 (OMIM: 605674) PREDICTED: protein BTG ( 306)  257 40.1  0.0077


>>NP_001230806 (OMIM: 605523) protein Tob1 isoform 1 [Ho  (345 aa)
 initn: 2334 init1: 2334 opt: 2334  Z-score: 1369.3  bits: 261.8 E(85289): 1.6e-69
Smith-Waterman score: 2334; 100.0% identity (100.0% similar) in 345 aa overlap (1-345:1-345)

               10        20        30        40        50        60
pF1KB9 MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 TFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 QQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLNLSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLNLSP
              250       260       270       280       290       300

              310       320       330       340     
pF1KB9 LQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNMQYSNQQFQPVMAN
       :::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNMQYSNQQFQPVMAN
              310       320       330       340     

>>NP_005740 (OMIM: 605523) protein Tob1 isoform 1 [Homo   (345 aa)
 initn: 2334 init1: 2334 opt: 2334  Z-score: 1369.3  bits: 261.8 E(85289): 1.6e-69
Smith-Waterman score: 2334; 100.0% identity (100.0% similar) in 345 aa overlap (1-345:1-345)

               10        20        30        40        50        60
pF1KB9 MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 TFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 QQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLNLSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLNLSP
              250       260       270       280       290       300

              310       320       330       340     
pF1KB9 LQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNMQYSNQQFQPVMAN
       :::::::::::::::::::::::::::::::::::::::::::::
NP_005 LQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNMQYSNQQFQPVMAN
              310       320       330       340     

>>NP_001230814 (OMIM: 605523) protein Tob1 isoform 2 [Ho  (206 aa)
 initn: 1386 init1: 1386 opt: 1386  Z-score: 825.7  bits: 160.5 E(85289): 3e-39
Smith-Waterman score: 1386; 100.0% identity (100.0% similar) in 206 aa overlap (140-345:1-206)

     110       120       130       140       150       160         
pF1KB9 KVLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMP
                                     ::::::::::::::::::::::::::::::
NP_001                               MPISDPASSVSSSPSPPFGHSAAVSPTFMP
                                             10        20        30

     170       180       190       200       210       220         
pF1KB9 RSTQPLTFTTATFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSTQPLTFTTATFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSL
               40        50        60        70        80        90

     230       240       250       260       270       280         
pF1KB9 YGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGM
              100       110       120       130       140       150

     290       300       310       320       330       340     
pF1KB9 FPGDSPLNLSPLQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNMQYSNQQFQPVMAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPGDSPLNLSPLQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNMQYSNQQFQPVMAN
              160       170       180       190       200      

>>XP_016884028 (OMIM: 607396) PREDICTED: protein Tob2 is  (344 aa)
 initn: 1084 init1: 680 opt: 1159  Z-score: 691.6  bits: 136.4 E(85289): 8.8e-32
Smith-Waterman score: 1197; 55.7% identity (73.5% similar) in 377 aa overlap (1-345:1-344)

               10        20        30        40        50        60
pF1KB9 MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI
       :::::.::::::::::::::::::...:::::::::::::::::::::: :::::::.::
XP_016 MQLEIKVALNFIISYLYNKLPRRRADLFGEELERLLKKKYEGHWYPEKPLKGSGFRCVHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
       :: ::::.: :.:.::: ..:::.:.:..:::::::::::::::::: :::::.::..  
XP_016 GEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGAVKVLYLDDSE--
               70        80        90       100       110          

                 130       140       150       160       170       
pF1KB9 GC---ELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTF
       ::   :::::::.::::.::::.::..  ::.:.:::: ::.:   ::::.:::.::.::
XP_016 GCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSP--SPTFIPRSAQPITF
      120       130       140       150       160         170      

       180       190       200                   210       220     
pF1KB9 TTATFAATKFGSTKMKNSGRSNK---VARTS---------PINLGLNVNDLLKQKAISSS
       :::.::::::::::::..: . .   :: ..         :      .:.:::.:..: :
XP_016 TTASFAATKFGSTKMKKGGGAASGGGVASSGAGGQQPPQQPRMARSPTNSLLKHKSLSLS
        180       190       200       210       220       230      

         230       240       250       260       270               
pF1KB9 MHSLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIF-----PNM-
       ::::  .  .                  : ::.:       ::::::::..     :.. 
XP_016 MHSLNFITAN------------------PAPQSQ-------LSPNAKEFVYNGGGSPSLF
        240                         250              260       270 

         280       290       300       310             320         
pF1KB9 ----QGQGSSTNGMFPGDSPLNLSPLQYSNAFDVFAAYGG------LNEKSFVDGLNFSL
           .::::.: : : :..  . .    :..::.  ..::      :..  ::.::...:
XP_016 FDAADGQGSGTPGPFGGSGAGTCN----SSSFDMAQVFGGGANSLFLEKTPFVEGLSYNL
             280       290           300       310       320       

     330       340      
pF1KB9 NNMQYSNQQFQPV-MAN
       :.::: .:::::: .::
XP_016 NTMQYPSQQFQPVVLAN
       330       340    

>>XP_006724168 (OMIM: 607396) PREDICTED: protein Tob2 is  (344 aa)
 initn: 1084 init1: 680 opt: 1159  Z-score: 691.6  bits: 136.4 E(85289): 8.8e-32
Smith-Waterman score: 1197; 55.7% identity (73.5% similar) in 377 aa overlap (1-345:1-344)

               10        20        30        40        50        60
pF1KB9 MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI
       :::::.::::::::::::::::::...:::::::::::::::::::::: :::::::.::
XP_006 MQLEIKVALNFIISYLYNKLPRRRADLFGEELERLLKKKYEGHWYPEKPLKGSGFRCVHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
       :: ::::.: :.:.::: ..:::.:.:..:::::::::::::::::: :::::.::..  
XP_006 GEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGAVKVLYLDDSE--
               70        80        90       100       110          

                 130       140       150       160       170       
pF1KB9 GC---ELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTF
       ::   :::::::.::::.::::.::..  ::.:.:::: ::.:   ::::.:::.::.::
XP_006 GCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSP--SPTFIPRSAQPITF
      120       130       140       150       160         170      

       180       190       200                   210       220     
pF1KB9 TTATFAATKFGSTKMKNSGRSNK---VARTS---------PINLGLNVNDLLKQKAISSS
       :::.::::::::::::..: . .   :: ..         :      .:.:::.:..: :
XP_006 TTASFAATKFGSTKMKKGGGAASGGGVASSGAGGQQPPQQPRMARSPTNSLLKHKSLSLS
        180       190       200       210       220       230      

         230       240       250       260       270               
pF1KB9 MHSLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIF-----PNM-
       ::::  .  .                  : ::.:       ::::::::..     :.. 
XP_006 MHSLNFITAN------------------PAPQSQ-------LSPNAKEFVYNGGGSPSLF
        240                         250              260       270 

         280       290       300       310             320         
pF1KB9 ----QGQGSSTNGMFPGDSPLNLSPLQYSNAFDVFAAYGG------LNEKSFVDGLNFSL
           .::::.: : : :..  . .    :..::.  ..::      :..  ::.::...:
XP_006 FDAADGQGSGTPGPFGGSGAGTCN----SSSFDMAQVFGGGANSLFLEKTPFVEGLSYNL
             280       290           300       310       320       

     330       340      
pF1KB9 NNMQYSNQQFQPV-MAN
       :.::: .:::::: .::
XP_006 NTMQYPSQQFQPVVLAN
       330       340    

>>XP_005261372 (OMIM: 607396) PREDICTED: protein Tob2 is  (344 aa)
 initn: 1084 init1: 680 opt: 1159  Z-score: 691.6  bits: 136.4 E(85289): 8.8e-32
Smith-Waterman score: 1197; 55.7% identity (73.5% similar) in 377 aa overlap (1-345:1-344)

               10        20        30        40        50        60
pF1KB9 MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI
       :::::.::::::::::::::::::...:::::::::::::::::::::: :::::::.::
XP_005 MQLEIKVALNFIISYLYNKLPRRRADLFGEELERLLKKKYEGHWYPEKPLKGSGFRCVHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
       :: ::::.: :.:.::: ..:::.:.:..:::::::::::::::::: :::::.::..  
XP_005 GEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGAVKVLYLDDSE--
               70        80        90       100       110          

                 130       140       150       160       170       
pF1KB9 GC---ELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTF
       ::   :::::::.::::.::::.::..  ::.:.:::: ::.:   ::::.:::.::.::
XP_005 GCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSP--SPTFIPRSAQPITF
      120       130       140       150       160         170      

       180       190       200                   210       220     
pF1KB9 TTATFAATKFGSTKMKNSGRSNK---VARTS---------PINLGLNVNDLLKQKAISSS
       :::.::::::::::::..: . .   :: ..         :      .:.:::.:..: :
XP_005 TTASFAATKFGSTKMKKGGGAASGGGVASSGAGGQQPPQQPRMARSPTNSLLKHKSLSLS
        180       190       200       210       220       230      

         230       240       250       260       270               
pF1KB9 MHSLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIF-----PNM-
       ::::  .  .                  : ::.:       ::::::::..     :.. 
XP_005 MHSLNFITAN------------------PAPQSQ-------LSPNAKEFVYNGGGSPSLF
        240                         250              260       270 

         280       290       300       310             320         
pF1KB9 ----QGQGSSTNGMFPGDSPLNLSPLQYSNAFDVFAAYGG------LNEKSFVDGLNFSL
           .::::.: : : :..  . .    :..::.  ..::      :..  ::.::...:
XP_005 FDAADGQGSGTPGPFGGSGAGTCN----SSSFDMAQVFGGGANSLFLEKTPFVEGLSYNL
             280       290           300       310       320       

     330       340      
pF1KB9 NNMQYSNQQFQPV-MAN
       :.::: .:::::: .::
XP_005 NTMQYPSQQFQPVVLAN
       330       340    

>>NP_057356 (OMIM: 607396) protein Tob2 [Homo sapiens]    (344 aa)
 initn: 1084 init1: 680 opt: 1159  Z-score: 691.6  bits: 136.4 E(85289): 8.8e-32
Smith-Waterman score: 1197; 55.7% identity (73.5% similar) in 377 aa overlap (1-345:1-344)

               10        20        30        40        50        60
pF1KB9 MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI
       :::::.::::::::::::::::::...:::::::::::::::::::::: :::::::.::
NP_057 MQLEIKVALNFIISYLYNKLPRRRADLFGEELERLLKKKYEGHWYPEKPLKGSGFRCVHI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
       :: ::::.: :.:.::: ..:::.:.:..:::::::::::::::::: :::::.::..  
NP_057 GEMVDPVVELAAKRSGLAVEDVRANVPEELSVWIDPFEVSYQIGEKGAVKVLYLDDSE--
               70        80        90       100       110          

                 130       140       150       160       170       
pF1KB9 GC---ELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTF
       ::   :::::::.::::.::::.::..  ::.:.:::: ::.:   ::::.:::.::.::
NP_057 GCGAPELDKEIKSSFNPDAQVFVPIGSQDSSLSNSPSPSFGQSP--SPTFIPRSAQPITF
      120       130       140       150       160         170      

       180       190       200                   210       220     
pF1KB9 TTATFAATKFGSTKMKNSGRSNK---VARTS---------PINLGLNVNDLLKQKAISSS
       :::.::::::::::::..: . .   :: ..         :      .:.:::.:..: :
NP_057 TTASFAATKFGSTKMKKGGGAASGGGVASSGAGGQQPPQQPRMARSPTNSLLKHKSLSLS
        180       190       200       210       220       230      

         230       240       250       260       270               
pF1KB9 MHSLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIF-----PNM-
       ::::  .  .                  : ::.:       ::::::::..     :.. 
NP_057 MHSLNFITAN------------------PAPQSQ-------LSPNAKEFVYNGGGSPSLF
        240                         250              260       270 

         280       290       300       310             320         
pF1KB9 ----QGQGSSTNGMFPGDSPLNLSPLQYSNAFDVFAAYGG------LNEKSFVDGLNFSL
           .::::.: : : :..  . .    :..::.  ..::      :..  ::.::...:
NP_057 FDAADGQGSGTPGPFGGSGAGTCN----SSSFDMAQVFGGGANSLFLEKTPFVEGLSYNL
             280       290           300       310       320       

     330       340      
pF1KB9 NNMQYSNQQFQPV-MAN
       :.::: .:::::: .::
NP_057 NTMQYPSQQFQPVVLAN
       330       340    

>>NP_001722 (OMIM: 109580) protein BTG1 [Homo sapiens]    (171 aa)
 initn: 365 init1: 338 opt: 363  Z-score: 236.8  bits: 51.2 E(85289): 1.9e-06
Smith-Waterman score: 363; 46.4% identity (81.2% similar) in 112 aa overlap (4-113:14-125)

                         10          20        30        40        
pF1KB9           MQLEIQVALNFIISYLYNK--LPRRRVNIFGEELERLLKKKYEGHWYPEK
                    :: .:..:: ..: .:    .:... :.. :..:: ..:. ::.:::
NP_001 MHPFYTRAATMIGEIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAEHYKHHWFPEK
               10        20        30        40        50        60

       50        60        70        80        90       100        
pF1KB9 PYKGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGP
       : ::::.:::.:..:.::.: ::... ::. ...   ::..:..:.::.::::.::: : 
NP_001 PCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEVSYRIGEDGS
               70        80        90       100       110       120

      110       120       130       140       150       160        
pF1KB9 VKVLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFM
       . :::                                                       
NP_001 ICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSG         
              130       140       150       160       170          

>>NP_006754 (OMIM: 601597) protein BTG2 [Homo sapiens]    (158 aa)
 initn: 331 init1: 331 opt: 352  Z-score: 230.9  bits: 50.0 E(85289): 4e-06
Smith-Waterman score: 352; 40.5% identity (75.4% similar) in 126 aa overlap (1-124:9-134)

                       10          20        30        40        50
pF1KB9         MQLEIQVALNFIISYLYNK--LPRRRVNIFGEELERLLKKKYEGHWYPEKPY
               :  :: .:..:. : : ..  . ..:...:.  :.. : ..:. ::.:::: 
NP_006 MSHGKGTDMLPEIAAAVGFLSSLLRTRGCVSEQRLKVFSGALQEALTEHYKHHWFPEKPS
               10        20        30        40        50        60

               60        70        80        90       100       110
pF1KB9 KGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVK
       ::::.:::.:..:.::.: ..... ::.  ...  ::..:..:.::.::::.::: : . 
NP_006 KGSGYRCIRINHKMDPIISRVASQIGLSQPQLHQLLPSELTLWVDPYEVSYRIGEDGSIC
               70        80        90       100       110       120

              120       130       140       150       160       170
pF1KB9 VLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPR
       ::: .     .: :                                              
NP_006 VLYEEAPLAASCGLLTCKNQVLLGRSSPSKNYVMAVSS                      
              130       140       150                              

>>XP_016883755 (OMIM: 605674) PREDICTED: protein BTG3 is  (252 aa)
 initn: 259 init1: 213 opt: 302  Z-score: 199.2  bits: 44.8 E(85289): 0.00023
Smith-Waterman score: 305; 28.5% identity (60.9% similar) in 235 aa overlap (1-207:1-228)

               10           20        30        40        50       
pF1KB9 MQLEIQVALNFIISYL---YNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRC
       :. :: .:. :... :   ..:: .. :. :.:.:  .:..::..::::::: ::...::
XP_016 MKNEI-AAVVFFFTRLVRKHDKLKKEAVERFAEKLTLILQEKYKNHWYPEKPSKGQAYRC
                10        20        30        40        50         

        60          70        80        90       100       110     
pF1KB9 IHIG--EKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLY-V
       :...  ..::: . .: ..: .  .:.  .::..:..:.:: ::  . :::. . ..   
XP_016 IRVNKFQRVDPDVLKACENSCILYSDL--GLPKELTLWVDPCEVCCRYGEKNNAFIVASF
      60        70        80          90       100       110       

          120       130       140                   150       160  
pF1KB9 DDNNENGCELDKEIKNSFNPEAQVFMPISDPA------------SSVSSSPSPPFGHSAA
       ....::  :.....  ...  .. .   :. .            :::... :: .  :  
XP_016 ENKDENKDEISRKVTRALDKVTSDYHSGSSSSDEETSKEMEVKPSSVTAAASPVYQISEL
       120       130       140       150       160       170       

                 170       180            190       200       210  
pF1KB9 VSPTF-----MPRSTQPLTFTTATFAA-----TKFGSTKMKNSGRSNKVARTSPINLGLN
       . : .     .::. .:  .            . ::   . :.::.::  :  :.     
XP_016 IFPPLPMWHPLPRK-KPGMYRGNGHQNHYPPPVPFG---YPNQGRKNKPYRPIPVTWVPP
       180       190        200       210          220       230   

            220       230       240       250       260       270  
pF1KB9 VNDLLKQKAISSSMHSLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALSPNAK
                                                                   
XP_016 PGMHCDRNHWINPHMLAPH                                         
           240       250                                           




345 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 19:34:24 2016 done: Fri Nov  4 19:34:26 2016
 Total Scan time:  8.520 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com