GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:25:14

Sequence gi568815590r:76883264_77084178 : 200915 bp : 36.97% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2834   2851   18  1  0   85  115    -1 0.256   1.70
 1.02 Intr +   8462   8518   57  1  0   63   83    69 0.506   2.06
 1.03 Term +  10590  10763  174  2  0   75   48   114 0.528   2.88
 1.04 PlyA +  11094  11099    6                               1.05

 2.05 PlyA -  12005  12000    6                               1.05
 2.04 Term -  15644  15019  626  0  2   34   42   303 0.656  13.86
 2.03 Intr -  18431  18302  130  2  1   51   89    70 0.287   2.75
 2.02 Intr -  28799  28645  155  0  2   12   92    96 0.099   1.27
 2.01 Init -  61435  61312  124  1  1   51   55   134 0.834   6.80
 2.00 Prom -  62483  62444   40                              -5.95

 3.00 Prom +  67618  67657   40                              -1.35
 3.01 Sngl +  90804  91382  579  2  0   74   42   174 0.811   7.32
 3.02 PlyA +  91384  91389    6                              -0.45

 4.00 Prom +  91754  91793   40                              -3.65
 4.01 Init +  93577  93605   29  0  2   90   78    23 0.515   0.64
 4.02 Term +  96588  96678   91  0  1  125   39    96 0.450   4.61
 4.03 PlyA +  96691  96696    6                               1.05

 5.02 PlyA -  97022  97017    6                               1.05
 5.01 Sngl - 100915  99998  918  1  0   92   43   322 0.975  24.18
 5.00 Prom - 102327 102288   40                              -6.75

 6.00 Prom + 102883 102922   40                              -4.05
 6.01 Init + 104009 104097   89  1  2   77   63    65 0.855   3.06
 6.02 Intr + 109195 109340  146  1  2  122   52   116 0.521  10.41
 6.03 Intr + 116573 116757  185  0  2   25   45   109 0.288  -1.11
 6.04 Intr + 116803 117011  209  0  2   56    2   418 0.024  26.95
 6.05 Intr + 133621 133751  131  1  2   17   47   105 0.151  -1.28
 6.06 Intr + 136526 136608   83  0  2  150   83    15 0.480   5.64
 6.07 Intr + 137531 137609   79  1  1   85   91    47 0.496   2.91
 6.08 Term + 139276 139799  524  2  2   48   36   260 0.898  10.25
 6.09 PlyA + 140110 140115    6                               1.05

 7.00 Prom + 141612 141651   40                              -3.65
 7.01 Init + 144324 144537  214  2  1   76   88   203 0.897  18.05
 7.02 Term + 145610 145686   77  0  2  104   49    30 0.496  -2.28
 7.03 PlyA + 145698 145703    6                               1.05

 8.00 Prom + 148345 148384   40                              -3.55
 8.01 Sngl + 159982 160638  657  0  0   59   41   245 0.902  12.82
 8.02 PlyA + 160866 160871    6                               1.05

 9.00 Prom + 161037 161076   40                              -6.15
 9.01 Sngl + 162577 163809 1233  0  0   37   42   313 0.647  17.15
 9.02 PlyA + 165025 165030    6                               1.05

10.03 PlyA - 165363 165358    6                               1.05
10.02 Term - 194211 194025  187  2  1   63   38   146 0.703   3.08
10.01 Init - 200402 200188  215  2  2   57   89   167 0.433  11.12

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 116803 117015  213  0  0   56   38   418 0.901  29.85


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:76883264_77084178|GENSCAN_predicted_peptide_1|82_aa
MPHPPKLQCGEELKEDKDWRQRDDLKNPLTVLTFPSRFGIWRNKSGLVLPLGFRCGVFKT
KSKTITGSFSSRDKNCIANLEQ

>gi568815590r:76883264_77084178|GENSCAN_predicted_CDS_1|249_bp
atgccccatccccccaagctgcagtgtggagaagaactaaaggaggacaaagactggagg
cagagagacgatttaaagaacccactgaccgttttgacctttccttccaggtttggcatt
tggaggaataaatcaggattagtgctgccattaggcttcagatgtggtgtcttcaagaca
aaaagtaagaccattactggcagttttagctctcgggacaagaactgcattgctaatttg
gaacagtaa

>gi568815590r:76883264_77084178|GENSCAN_predicted_peptide_2|344_aa
MVYFAQVLHTVQELVLASASDKDLRRLPIMAEGEGGAVVSHIFHEEEERWRGKGFNWTSI
TTIIQDPHGAQVFHVAAQMKRSFSSKKGRYQSYGIAEQKAADSFCRLKRPCLTALKRAVV
IPAQHLSSENGQTASSKLQTTIREYYKHLYANKLENLEEMDKFLDTYPLQILNQEEVESL
NRPITGSEIETIINSLPTKKSTGPDGFTAEFYQRYKEELVLFLLKQFQSIEKEGVFPNSF
YEASIILIPKPGRDTTKKENFRPISLMNINAKMLNNILANQIQQHIKKLIHHDQVSFIPG
MQGWFNIGKSINVIHYRNRTNDKNHIIISIDAEKAFDKIEQPSC

>gi568815590r:76883264_77084178|GENSCAN_predicted_CDS_2|1035_bp
atggtttactttgctcaggttctgcatactgtgcaagaactggtactggcatctgcttct
gataaggacctcagaaggcttccaatcatggcagaaggtgaaggaggagcagttgtgtca
catatctttcatgaagaagaagaaagatggcgtgggaagggctttaactggacatcaatc
acaactattatccaagatccccatggggcccaagtttttcacgtggcagcccaaatgaag
agaagtttctctagcaaaaaagggagataccaatcatatggcatagcagaacaaaaggca
gcagacagcttctgcagacttaaacgtccttgtctgacagctctgaagagagcagtggtt
atcccagcacaacatttgagctctgagaatggacagactgcctcctcaaaattacaaact
accatcagagaatactataaacacctttatgcaaataaactagaaaatctagaagaaatg
gataaatttctggacacataccctctccaaatactaaaccaggaagaagttgaatctctg
aatagaccaataacaggctctgaaattgagacaataattaatagtctaccaaccaaaaaa
agtacaggaccagacggattcacagccgaattctaccagaggtacaaggaggagctggta
ctattccttctgaaacaattccaatcaatagaaaaagagggagtcttccctaattcattt
tatgaggccagcatcatcctgataccaaagcctggcagggacacaacaaaaaaagagaat
tttagaccaatatccctgatgaacatcaatgcgaaaatgctcaataacatactggcaaac
caaatccagcagcacatcaaaaagcttatccaccacgatcaagtcagcttcatccctggc
atgcaaggctggttcaacataggcaaatcaataaatgtaattcattatagaaacagaacc
aacgacaaaaaccatatcattatctcaatagatgcagaaaaggccttcgacaaaattgaa
caaccttcatgctaa

>gi568815590r:76883264_77084178|GENSCAN_predicted_peptide_3|192_aa
MLPDFKLYYKASVTKTAWYWYQNRDIDLWNRTEPSEIIPHIYNHLIFDKPEKNKKWGKDS
LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKNIKALEENLGNNIQDIGM
GKDFITKTPKAMATKAKIDKCDLIKLKSFCTAKETTIKANRQPTEWEKIFAIYSSDKGLI
SRIYKDLKQIYK

>gi568815590r:76883264_77084178|GENSCAN_predicted_CDS_3|579_bp
atgctacctgacttcaaactatactacaaggcttcagtaaccaaaacagcatggtactgg
taccaaaacagagatatagacctatggaacagaacagagccctcagaaataataccacac
atctacaaccatctgatctttgacaaacctgagaaaaacaagaaatggggaaaggattcc
ctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggat
cccttcctaacaccttacacaaaaatcaattcacgatggattaaagacttaaatgttaga
cctaaaaacataaaagccctagaggaaaacctaggcaataacattcaggacataggcatg
ggcaaggacttcattactaaaacaccaaaagcaatggcaacaaaagccaaaatagacaaa
tgtgatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcaaagcgaac
aggcaacctacagaatgggagaaaatttttgcaatctactcatctgacaaagggctaata
tccagaatctacaaagacctcaaacaaatttacaagtaa

>gi568815590r:76883264_77084178|GENSCAN_predicted_peptide_4|39_aa
MDAAVGCYPKHGSLRVIHKNLLYFKPLSTPASAEPYLRP

>gi568815590r:76883264_77084178|GENSCAN_predicted_CDS_4|120_bp
atggatgcagctgtaggctgttatcctaagcatggatccctgagagttatacataaaaat
ctcttgtacttcaaacccctttcaacgccagcttctgcagaaccctatctgcgaccttag

>gi568815590r:76883264_77084178|GENSCAN_predicted_peptide_5|305_aa
MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL
WVFLWRFTIYSKNATVGQSVLNIKYKNDFSPNLRYQPPSKNQKIWYAVCTIGGRWLEERC
YDLFRNHHLASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFATLTERLLGIHSVFCKP
QNICEVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWCIPLTGAPNSDNTLATS
GKECALCGEWPTMPHTIGCEHIFCYFCAKSSFLFDVYFTCPKCGTEVHSLQPLKSGIEMS
EVNAL

>gi568815590r:76883264_77084178|GENSCAN_predicted_CDS_5|918_bp
atggcttccagaaaagagaatgcgaagagtgcaaacagagtgctaagaataagccagttg
gatgcacttgaactaaacaaggccctggagcagctagtttggtcccagtttactcagtgc
tttcatggatttaaacctgggctgttagctcgctttgagccagaggtgaaagcgtgctta
tgggttttcttgtggagattcaccatctactccaaaaatgccacagtgggacagtcagtt
ttgaatattaagtacaaaaatgatttttcccctaacctgagatatcagccacccagtaaa
aatcaaaaaatctggtatgctgtttgtacaattggtggcaggtggttagaagaacgatgc
tatgatttgtttcgaaaccatcatttagcatcatttgggaaagtcaagcagtgtgtgaat
tttgtgattggacttttgaaattaggtgggctgattaattttttgattttccttcagagg
ggaaagtttgcaactttgacagaacgtctcctaggtattcattctgtattttgcaagcct
caaaacatatgtgaagttggctttgaatacatgaatagggaacttctctggcatggtttt
gctgaatttctgatttttctcttaccacttatcaatgtccagaagttgaaagccaagctg
tcttcatggtgtattcctcttactggtgcacctaatagtgacaatacattagccaccagt
ggcaaagaatgcgctctatgtggagagtggcccaccatgcctcacaccataggatgtgag
catattttctgttatttctgtgctaagagtagtttcttatttgacgtgtactttacttgt
cctaagtgtggcacagaagtacacagtctgcagccactgaaatcaggaatcgagatgtca
gaagtaaatgctctttag

>gi568815590r:76883264_77084178|GENSCAN_predicted_peptide_6|481_aa
MVTTILQKVREGFLGEAIPKQPPDISMSAWYSYSRILSLEKGSKGVEENDEIKITRNSIN
PIMESSSLYSSTTRFVIIAALICLFQGDRKPINREKKANGDNYKVVKLHDLPAENKTSGL
HSGSLGQTLTLGVCETPTLHPNLDYQGFRNSQASGATQEPEVAEKKKKKLHQRELRFSGA
AEGTGWPNNRERRQAEEPKGRKAEADTRARRGYSSPYANSGNSYSTLLTRSFPYHQNEFH
FRPNLAIIVSPNPGVCSTKILTCLILPRHLLFGGSKLKEVGKLPPFPSVERSTTSTMLED
ASEPLHTEIQTTIREYYKHLYTNKLENLEEIDKLLDTYTLPRLNQEEVESLNRPITGSEI
VAIINSLPTKKSPGPDGFTAKFYQRYKEEMVPLLLKLFQSIEKEGILPNSFYEASIILIQ
KPGRDTTKKENFRPISLMNIDAKILNKILANGIQQHIKNLSTMIKWASSLECKAGSIYSN
Q

>gi568815590r:76883264_77084178|GENSCAN_predicted_CDS_6|1446_bp
atggttacaactatacttcagaaggtcagagaaggcttcctgggagaggcaatacctaag
cagccacctgatattagcatgtcagcctggtacagctattctagaatactctctttagaa
aagggcagcaaaggagtagaagaaaatgatgaaatcaaaataactagaaattcaattaac
ccaattatggaatcttcttccctctacagcagtacaacaagatttgttataatagcagct
ttgatttgccttttccagggagacaggaagccaataaacagggaaaaaaaagcaaacggc
gacaattacaaggtcgtgaaactccacgacctcccagctgaaaacaagacctcgggtttg
cactccggctctctagggcagacactgaccttaggagtctgcgaaacgcccacgctccac
ccgaatctggattaccaaggcttccggaactcgcaggcttccggagcgacgcaggagccg
gaagtggctgaaaaaaaaaagaaaaagttacaccaacgagaactgcgctttagcggcgct
gctgaaggcactggatggccaaacaaccgcgaacgccgacaagccgaagagccgaagggc
cgaaaagccgaagcggacacccgcgcgcgacgaggttacagcagcccctatgccaactct
gggaactcctattcaacgttactgacccgttcattcccataccatcagaatgaatttcac
ttcaggcctaaccttgccatcattgtttctcccaatcctggtgtttgctctactaaaatc
cttacatgcttaattttgcctaggcatttgctttttggaggatctaaactaaaagaagtg
ggaaagttgccacctttcccttctgtagaaagatctaccacttcaactatgctagaagat
gcttcagaacctctccacacagaaatacaaactaccatcagagaatactacaaacacctc
tacacaaataaactagaaaatctagaagaaatagataaattgctcgacacatacaccctc
ccaagactaaaccaggaagaagttgaatctctgaataggccaataacaggctctgaaatt
gtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcacagcc
aaattctatcagaggtacaaggaggaaatggtaccactccttctgaaactattccaatca
atagaaaaagagggaatcctccctaactcattttatgaggccagcatcatcctgatacaa
aagcctggcagagacacaacaaaaaaagagaattttagaccaatatccttgatgaacatt
gatgcaaaaatcctcaataaaatactggcaaatggaatccagcagcacatcaaaaactta
tccaccatgatcaagtgggcttcatccctggaatgcaaggctggttcaatatactcaaat
caataa

>gi568815590r:76883264_77084178|GENSCAN_predicted_peptide_7|96_aa
MVELSGTIKELDDTGVMISVTYQFNATLAPAAARLSQENGCRLMQAKQVVAMIAAAAPDL
ALLLKQINKTSVRDRLVSLSDRLSEPYPAPFQFPST

>gi568815590r:76883264_77084178|GENSCAN_predicted_CDS_7|291_bp
atggtagagttaagtggcactattaaagagctagatgatacaggggtaatgatctctgtc
acataccaatttaatgccactctggcccctgcagcagccagattgagccaggaaaacggc
tgtagactaatgcaggctaaacaagtagtagccatgattgcagctgctgcaccagatttg
gcactgttgctaaaacagatcaacaagacctcagtcagggacagacttgtatcattgtct
gacagactctcagagccttatccggctcccttccaattcccttccacatag

>gi568815590r:76883264_77084178|GENSCAN_predicted_peptide_8|218_aa
MEDQMNEIKQEEKFREKRIKRNEQSLQEIWEYVKRPNLCLIGVPESDGENGTKLENTLQD
IIQENFPNLARQASIQIQEIQRTPQRYSLRRATPRHIIVRFTKVEMKEKMLRATREKGQV
IHKGKPIRLTADLLVETLQARREWGPIFNILKEKNFQPRISYPAKLNFISEGEIKYFTDK
QMLRDFVTTRPALEELLKEALNMERNNQYQPLQKHAKL

>gi568815590r:76883264_77084178|GENSCAN_predicted_CDS_8|657_bp
atggaagatcaaatgaatgaaatcaagcaagaagagaagtttagagaaaaaagaataaaa
agaaatgaacaaagcctccaagaaatatgggaatatgtgaaaagaccaaatctatgtctg
attggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggat
atcatccaggagaacttccccaacctagcaaggcaggccagcattcaaattcaggaaata
cagagaacgccacaaagatactccttgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcaaccagagagaaaggtcaggtt
atccacaaagggaagcccatcagactaacagctgatctcttagtagaaactctacaagca
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatc
tcatatccagccaaattaaacttcataagtgaaggagaaataaaatactttacagacaaa
caaatgctgagagattttgtcaccaccaggcctgccctagaagagctcctgaaggaagca
ctaaacatggaaaggaacaaccagtaccagccactgcaaaaacatgccaaattgtaa

>gi568815590r:76883264_77084178|GENSCAN_predicted_peptide_9|410_aa
MNPDAKILNKILANQIQQHIKKLIHHEEVGFIPGMQGWFNIRKSINVIQHINRTNDKNHM
IISIDAEKAFDKIQQHFMLKTLNKLDIDGAYLEIIRAIYDKPTANIKLNGQKLEAFPLTT
GTRQGCPLSPLLFNIVLEVLARAIKQEKERKGIQLGKEEVKLSLFAGDMIIYLENPIISA
QNILKLISNFSKVSGYKINVQKSQAFLYSNNRQTESQIMSELLFSSASRRIKYLGIQLTR
NVKDLFKENYKPLLNKIKEGTNKWKNIPCCWIGRINIMKMAILSKVIYRFNAIPIKLPMT
FFTELEKTTLKFIWNQNTARIAKSILSKKNKAGGIMLPDFKLYYKATVTKTAWYWYQNRD
IDQWNRTESSEIMPHIYNHLIFDKPEKNKKWGKDSLFIIGNIINGAGKTG

>gi568815590r:76883264_77084178|GENSCAN_predicted_CDS_9|1233_bp
atgaaccctgatgcaaaaatcctcaataaaatactggcaaaccaaatccagcaacacatc
aaaaagcttatccaccatgaagaagttggcttcatccctgggatgcaaggctggttcaac
atacgcaaatcaataaacgtaatccagcatataaacagaaccaatgacaaaaaccacatg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacagcacttcatgctaaaa
actctcaataaattagatattgatggggcatatctcgaaataataagagctatttatgac
aaacccacagccaatatcaaactgaatgggcaaaaactggaagcattccctttgacaact
ggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctg
gccagggcaatcaagcaggagaaggaaagaaagggtattcaattaggaaaagaggaagtc
aaattgtccctgtttgcaggtgacatgatcatatatctagaaaaccccatcatctcagcc
caaaatatccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcttatacagcaataacagacaaacagagagccaaatcatgagt
gaactcctattctcaagtgcttcaaggagaataaaatacctaggaatccaacttacaagg
aatgtgaaggacctcttcaaggagaactacaaaccactgctcaacaaaataaaagagggt
acaaacaaatggaagaacattccatgctgctggataggaagaatcaatatcatgaaaatg
gccatactgtccaaggtaatttatagattcaatgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaactactttgaagttcatatggaaccaaaatacagcccgc
attgccaagtcaatcctaagcaaaaagaacaaagctggaggcatcatgctacctgacttc
aaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagat
atagatcaatggaacagaacagagtcctcagaaataatgccacatatctacaaccatctg
atctttgacaaacctgagaaaaacaagaaatggggaaaggattccctatttataataggg
aatataataaatggtgctgggaaaactggctag

>gi568815590r:76883264_77084178|GENSCAN_predicted_peptide_10|133_aa
MELAGWEPMLLDAAAAPQLWFQIQASLCSQGFRKPLPLQASKCLLLLPDLSLIPVPPEQS
CGRAQAVSQTARDINGAGGHYPQQTNAGTENQTSHVLTYKWELNDENTWTHGGEKLTLGP
VGVGGQEEKEHQD

>gi568815590r:76883264_77084178|GENSCAN_predicted_CDS_10|402_bp
atggagttggcagggtgggagcccatgcttctggatgcagctgcagcccctcagctgtgg
ttccagatccaggcatccctgtgttctcagggtttcaggaagcctctgcccctgcaagct
tcgaagtgcctgctcctgctacctgacctctccctgatcccagtgcccccagagcaaagc
tgtggccgagctcaagcagtgtcgcaaacagccagggacataaatggagctggaggccat
tatcctcagcaaactaatgcaggaacagaaaaccaaacatcgcatgttctcacttacaag
tgggagctgaatgatgagaacacatggacacatggaggagaaaaactcacactggggccg
gttggggttggggggcaggaagagaaggagcatcaggactaa