Result of FASTA (ccds) for pF1KB9707
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9707, 342 aa
  1>>>pF1KB9707 342 - 342 aa - 342 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.5393+/-0.000717; mu= 12.1947+/- 0.043
 mean_var=128.2604+/-26.023, 0's: 0 Z-trim(113.8): 76  B-trim: 123 in 1/51
 Lambda= 0.113247
 statistics sampled from 14372 (14449) to 14372 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.778), E-opt: 0.2 (0.444), width:  16
 Scan time:  2.750

The best scores are:                                      opt bits E(32554)
CCDS32995.2 ETV2 gene_id:2116|Hs108|chr19          ( 342) 2492 417.8 6.6e-117
CCDS74341.1 ETV2 gene_id:2116|Hs108|chr19          ( 249) 1803 305.1   4e-83
CCDS77281.1 ETV2 gene_id:2116|Hs108|chr19          ( 155)  748 132.5 2.2e-31
CCDS59230.1 FLI1 gene_id:2313|Hs108|chr11          ( 259)  395 75.0 7.4e-14
CCDS53724.1 ETS1 gene_id:2113|Hs108|chr11          ( 225)  394 74.8 7.5e-14
CCDS81648.1 ETS1 gene_id:2113|Hs108|chr11          ( 354)  395 75.2 9.3e-14
CCDS59231.1 FLI1 gene_id:2313|Hs108|chr11          ( 386)  395 75.2 9.9e-14
CCDS53725.1 FLI1 gene_id:2313|Hs108|chr11          ( 419)  395 75.2 1.1e-13
CCDS58789.1 ERG gene_id:2078|Hs108|chr21           ( 363)  394 75.0 1.1e-13
CCDS46649.1 ERG gene_id:2078|Hs108|chr21           ( 387)  394 75.0 1.1e-13
CCDS44768.1 FLI1 gene_id:2313|Hs108|chr11          ( 452)  395 75.3 1.1e-13
CCDS8475.1 ETS1 gene_id:2113|Hs108|chr11           ( 441)  394 75.1 1.2e-13
CCDS82674.1 ERG gene_id:2078|Hs108|chr21           ( 455)  394 75.1 1.3e-13
CCDS13657.1 ERG gene_id:2078|Hs108|chr21           ( 462)  394 75.1 1.3e-13
CCDS13659.1 ETS2 gene_id:2114|Hs108|chr21          ( 469)  394 75.1 1.3e-13
CCDS13658.1 ERG gene_id:2078|Hs108|chr21           ( 479)  394 75.1 1.3e-13
CCDS44767.1 ETS1 gene_id:2113|Hs108|chr11          ( 485)  394 75.1 1.3e-13
CCDS46648.1 ERG gene_id:2078|Hs108|chr21           ( 486)  394 75.1 1.3e-13
CCDS2428.1 FEV gene_id:54738|Hs108|chr2            ( 238)  374 71.6 7.5e-13
CCDS59292.1 ETV4 gene_id:2118|Hs108|chr17          ( 207)  359 69.1 3.7e-12
CCDS58553.1 ETV4 gene_id:2118|Hs108|chr17          ( 445)  359 69.4 6.5e-12
CCDS11465.1 ETV4 gene_id:2118|Hs108|chr17          ( 484)  359 69.4 6.9e-12
CCDS13575.1 GABPA gene_id:2551|Hs108|chr21         ( 454)  356 68.9 9.3e-12
CCDS55084.1 ETV1 gene_id:2115|Hs108|chr7           ( 374)  348 67.5   2e-11
CCDS33906.1 ETV5 gene_id:2119|Hs108|chr3           ( 510)  350 67.9   2e-11
CCDS55083.1 ETV1 gene_id:2115|Hs108|chr7           ( 419)  348 67.5 2.2e-11
CCDS55085.1 ETV1 gene_id:2115|Hs108|chr7           ( 437)  348 67.6 2.2e-11
CCDS55087.1 ETV1 gene_id:2115|Hs108|chr7           ( 454)  348 67.6 2.3e-11
CCDS55086.1 ETV1 gene_id:2115|Hs108|chr7           ( 459)  348 67.6 2.3e-11
CCDS55088.1 ETV1 gene_id:2115|Hs108|chr7           ( 477)  348 67.6 2.4e-11


>>CCDS32995.2 ETV2 gene_id:2116|Hs108|chr19               (342 aa)
 initn: 2492 init1: 2492 opt: 2492  Z-score: 2212.3  bits: 417.8 E(32554): 6.6e-117
Smith-Waterman score: 2492; 100.0% identity (100.0% similar) in 342 aa overlap (1-342:1-342)

               10        20        30        40        50        60
pF1KB9 MDLWNWDEASPQEVPPGNKLAGLEGAKLGFCFPDLALQGDTPTATAETCWKGTSSSLASF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MDLWNWDEASPQEVPPGNKLAGLEGAKLGFCFPDLALQGDTPTATAETCWKGTSSSLASF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PQLDWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSWSGASQTLGPAPLGPGPIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 PQLDWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSWSGASQTLGPAPLGPGPIP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 AAGSEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AAGSEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 SWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 IQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 IQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLR
              250       260       270       280       290       300

              310       320       330       340  
pF1KB9 YYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
       ::::::::::::::::::::::::::::::::::::::::::
CCDS32 YYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
              310       320       330       340  

>>CCDS74341.1 ETV2 gene_id:2116|Hs108|chr19               (249 aa)
 initn: 1803 init1: 1803 opt: 1803  Z-score: 1605.7  bits: 305.1 E(32554): 4e-83
Smith-Waterman score: 1803; 100.0% identity (100.0% similar) in 249 aa overlap (94-342:1-249)

            70        80        90       100       110       120   
pF1KB9 DWGSALLHPEVPWGAEPDSQALPWSGDWTDMACTAWDSWSGASQTLGPAPLGPGPIPAAG
                                     ::::::::::::::::::::::::::::::
CCDS74                               MACTAWDSWSGASQTLGPAPLGPGPIPAAG
                                             10        20        30

           130       140       150       160       170       180   
pF1KB9 SEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTISWG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SEGAAGQNCVPVAGEATSWSRAQAAGSNTSWDCSVGPDGDTYWGSGLGGEPRTDCTISWG
               40        50        60        70        80        90

           190       200       210       220       230       240   
pF1KB9 GPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 GPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQL
              100       110       120       130       140       150

           250       260       270       280       290       300   
pF1KB9 WQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 WQFLLELLHDGARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYY
              160       170       180       190       200       210

           310       320       330       340  
pF1KB9 RRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
       :::::::::::::::::::::::::::::::::::::::
CCDS74 RRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGRGAETQ
              220       230       240         

>>CCDS77281.1 ETV2 gene_id:2116|Hs108|chr19               (155 aa)
 initn: 747 init1: 747 opt: 748  Z-score: 676.9  bits: 132.5 E(32554): 2.2e-31
Smith-Waterman score: 748; 96.3% identity (98.2% similar) in 109 aa overlap (234-342:47-155)

           210       220       230       240       250       260   
pF1KB9 TSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDGARSSCIRWT
                                     .:  .:::::::::::::::::::::::::
CCDS77 GNKLAGLEGAKLGFCFPDLALQGDTPTATAETCWKGPIQLWQFLLELLHDGARSSCIRWT
         20        30        40        50        60        70      

           270       280       290       300       310       320   
pF1KB9 GNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 GNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGR
         80        90       100       110       120       130      

           330       340  
pF1KB9 VPSLAYPDCAGGGRGAETQ
       :::::::::::::::::::
CCDS77 VPSLAYPDCAGGGRGAETQ
        140       150     

>>CCDS59230.1 FLI1 gene_id:2313|Hs108|chr11               (259 aa)
 initn: 411 init1: 373 opt: 395  Z-score: 362.3  bits: 75.0 E(32554): 7.4e-14
Smith-Waterman score: 395; 45.1% identity (70.7% similar) in 133 aa overlap (193-320:36-167)

            170       180       190       200       210       220  
pF1KB9 DTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSP
                                     .:. ....: . :     .....  .:  :
CCDS59 LLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNNMNSGLNKSPPLGGAQTISKNTEQRP
          10        20        30        40        50        60     

            230            240       250       260       270       
pF1KB9 QSDRASLARCPKTNH-----RGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEV
       : :  ..   : ...      : ::::::::::: :.: .::: : :.. ::.. :: ::
CCDS59 QPDPYQILG-PTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEV
          70         80        90       100       110       120    

       280       290       300       310       320       330       
pF1KB9 ARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGR
       :: ::::: ::.:::.::::.::::: ..:. :  :..:.:.:                 
CCDS59 ARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESS
          130       140       150       160       170       180    

       340                                                         
pF1KB9 GAETQ                                                       
                                                                   
CCDS59 MYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVP
          190       200       210       220       230       240    

>>CCDS53724.1 ETS1 gene_id:2113|Hs108|chr11               (225 aa)
 initn: 415 init1: 394 opt: 394  Z-score: 362.2  bits: 74.8 E(32554): 7.5e-14
Smith-Waterman score: 394; 64.0% identity (82.0% similar) in 89 aa overlap (239-327:117-205)

      210       220       230       240       250       260        
pF1KB9 YQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDGARSSCIRWTGNSRE
                                     ::::::::::::: : . .: : :::.. :
CCDS53 TFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWE
         90       100       110       120       130       140      

      270       280       290       300       310       320        
pF1KB9 FQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLA
       :.: :: :::: ::.:: :: :::::::::::::: ..:..:..:..:.:::   . :: 
CCDS53 FKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLL
        150       160       170       180       190       200      

      330       340       
pF1KB9 YPDCAGGGRGAETQ     
                          
CCDS53 GYTPEELHAMLDVKPDADE
        210       220     

>>CCDS81648.1 ETS1 gene_id:2113|Hs108|chr11               (354 aa)
 initn: 417 init1: 394 opt: 395  Z-score: 360.5  bits: 75.2 E(32554): 9.3e-14
Smith-Waterman score: 395; 57.3% identity (76.7% similar) in 103 aa overlap (225-327:234-334)

          200       210       220       230       240       250    
pF1KB9 NPGLHAGGTTSLKRYQSSALTVCSEPSPQSDRASLARCPKTNHRGPIQLWQFLLELLHDG
                                     :   ..:  . .  ::::::::::::: : 
CCDS81 DYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGS--GPIQLWQFLLELLTDK
           210       220       230       240         250       260 

          260       270       280       290       300       310    
pF1KB9 ARSSCIRWTGNSREFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGR
       . .: : :::.. ::.: :: :::: ::.:: :: :::::::::::::: ..:..:..:.
CCDS81 SCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGK
             270       280       290       300       310       320 

          320       330       340       
pF1KB9 KYTYRFGGRVPSLAYPDCAGGGRGAETQ     
       .:.:::   . ::                    
CCDS81 RYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
             330       340       350    

>>CCDS59231.1 FLI1 gene_id:2313|Hs108|chr11               (386 aa)
 initn: 429 init1: 373 opt: 395  Z-score: 360.0  bits: 75.2 E(32554): 9.9e-14
Smith-Waterman score: 395; 45.1% identity (70.7% similar) in 133 aa overlap (193-320:163-294)

            170       180       190       200       210       220  
pF1KB9 DTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSP
                                     .:. ....: . :     .....  .:  :
CCDS59 LLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNNMNSGLNKSPPLGGAQTISKNTEQRP
            140       150       160       170       180       190  

            230            240       250       260       270       
pF1KB9 QSDRASLARCPKTNH-----RGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEV
       : :  ..   : ...      : ::::::::::: :.: .::: : :.. ::.. :: ::
CCDS59 QPDPYQILG-PTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEV
            200        210       220       230       240       250 

       280       290       300       310       320       330       
pF1KB9 ARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGR
       :: ::::: ::.:::.::::.::::: ..:. :  :..:.:.:                 
CCDS59 ARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESS
             260       270       280       290       300       310 

       340                                                         
pF1KB9 GAETQ                                                       
                                                                   
CCDS59 MYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVP
             320       330       340       350       360       370 

>>CCDS53725.1 FLI1 gene_id:2313|Hs108|chr11               (419 aa)
 initn: 398 init1: 373 opt: 395  Z-score: 359.5  bits: 75.2 E(32554): 1.1e-13
Smith-Waterman score: 395; 45.1% identity (70.7% similar) in 133 aa overlap (193-320:196-327)

            170       180       190       200       210       220  
pF1KB9 DTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSALTVCSEPSP
                                     .:. ....: . :     .....  .:  :
CCDS53 LLAYNTTSHTDQSSRLSVKEDPSYDSVRRGAWGNNMNSGLNKSPPLGGAQTISKNTEQRP
         170       180       190       200       210       220     

            230            240       250       260       270       
pF1KB9 QSDRASLARCPKTNH-----RGPIQLWQFLLELLHDGARSSCIRWTGNSREFQLCDPKEV
       : :  ..   : ...      : ::::::::::: :.: .::: : :.. ::.. :: ::
CCDS53 QPDPYQILG-PTSSRLANPGSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEV
         230        240       250       260       270       280    

       280       290       300       310       320       330       
pF1KB9 ARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSLAYPDCAGGGR
       :: ::::: ::.:::.::::.::::: ..:. :  :..:.:.:                 
CCDS53 ARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESS
          290       300       310       320       330       340    

       340                                                         
pF1KB9 GAETQ                                                       
                                                                   
CCDS53 MYKYPSDISYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVP
          350       360       370       380       390       400    

>>CCDS58789.1 ERG gene_id:2078|Hs108|chr21                (363 aa)
 initn: 395 init1: 373 opt: 394  Z-score: 359.4  bits: 75.0 E(32554): 1.1e-13
Smith-Waterman score: 394; 46.2% identity (65.0% similar) in 143 aa overlap (185-320:135-274)

          160       170       180       190       200       210    
pF1KB9 DCSVGPDGDTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSAL
                                     :  :   ..:.   :.  : . :  : :  
CCDS58 ETPLPHLTSDDVDKALQNSPRLMHARNTDLPYEPPRRSAWTG--HGHPTPQSKAAQPSPS
          110       120       130       140         150       160  

            220       230            240       250       260       
pF1KB9 TV--CSEPSPQSDRASLARCPKTNH-----RGPIQLWQFLLELLHDGARSSCIRWTGNSR
       ::    .  :: :  ..   : ...      : ::::::::::: :.. :::: : :.. 
CCDS58 TVPKTEDQRPQLDPYQILG-PTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNG
            170       180        190       200       210       220 

       270       280       290       300       310       320       
pF1KB9 EFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSL
       ::.. :: :::: ::::: ::.:::.::::.::::: ..:. :  :..:.:.:       
CCDS58 EFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQ
             230       240       250       260       270       280 

       330       340                                               
pF1KB9 AYPDCAGGGRGAETQ                                             
                                                                   
CCDS58 ALQPHPPESSLYKYPSDLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPT
             290       300       310       320       330       340 

>>CCDS46649.1 ERG gene_id:2078|Hs108|chr21                (387 aa)
 initn: 395 init1: 373 opt: 394  Z-score: 359.1  bits: 75.0 E(32554): 1.1e-13
Smith-Waterman score: 394; 46.2% identity (65.0% similar) in 143 aa overlap (185-320:159-298)

          160       170       180       190       200       210    
pF1KB9 DCSVGPDGDTYWGSGLGGEPRTDCTISWGGPAGPDCTTSWNPGLHAGGTTSLKRYQSSAL
                                     :  :   ..:.   :.  : . :  : :  
CCDS46 ARNTGGAAFIFPNTSVYPEATQRITTRPDLPYEPPRRSAWTG--HGHPTPQSKAAQPSPS
      130       140       150       160       170         180      

            220       230            240       250       260       
pF1KB9 TV--CSEPSPQSDRASLARCPKTNH-----RGPIQLWQFLLELLHDGARSSCIRWTGNSR
       ::    .  :: :  ..   : ...      : ::::::::::: :.. :::: : :.. 
CCDS46 TVPKTEDQRPQLDPYQILG-PTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNG
        190       200        210       220       230       240     

       270       280       290       300       310       320       
pF1KB9 EFQLCDPKEVARLWGERKRKPGMNYEKLSRGLRYYYRRDIVRKSGGRKYTYRFGGRVPSL
       ::.. :: :::: ::::: ::.:::.::::.::::: ..:. :  :..:.:.:       
CCDS46 EFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQ
         250       260       270       280       290       300     

       330       340                                               
pF1KB9 AYPDCAGGGRGAETQ                                             
                                                                   
CCDS46 ALQPHPPESSLYKYPSDLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPT
         310       320       330       340       350       360     




342 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 18:27:09 2016 done: Fri Nov  4 18:27:10 2016
 Total Scan time:  2.750 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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