Result of FASTA (omim) for pF1KB9685
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9685, 195 aa
  1>>>pF1KB9685 195 - 195 aa - 195 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.3567+/-0.000662; mu= 6.0870+/- 0.040
 mean_var=573.3322+/-150.711, 0's: 0 Z-trim(114.0): 464  B-trim: 1374 in 1/51
 Lambda= 0.053564
 statistics sampled from 23063 (23544) to 23063 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.276), width:  16
 Scan time:  5.670

The best scores are:                                      opt bits E(85289)
NP_009069 (OMIM: 603973) zinc finger protein 90 [H ( 601) 1337 118.7 1.8e-26
NP_001152765 (OMIM: 603984) zinc finger protein 73 ( 536) 1093 99.8 8.2e-21
XP_006722660 (OMIM: 603984) PREDICTED: zinc finger ( 550) 1093 99.8 8.3e-21
XP_011525901 (OMIM: 603984) PREDICTED: zinc finger ( 550) 1093 99.8 8.3e-21
XP_011525900 (OMIM: 603984) PREDICTED: zinc finger ( 551) 1093 99.8 8.3e-21
XP_005259754 (OMIM: 603984) PREDICTED: zinc finger ( 551) 1093 99.8 8.3e-21
NP_112495 (OMIM: 603975) zinc finger protein 93 [H ( 620) 1043 96.0 1.3e-19
NP_066971 (OMIM: 604756) zinc finger protein 273 [ ( 569)  991 92.0   2e-18
XP_016867177 (OMIM: 604756) PREDICTED: zinc finger ( 569)  991 92.0   2e-18
NP_003420 (OMIM: 603899) zinc finger protein 85 is ( 595)  976 90.8 4.5e-18
NP_066385 (OMIM: 606954) zinc finger protein 253 i ( 499)  972 90.4 5.2e-18
NP_258429 (OMIM: 606957) zinc finger protein 257 i ( 563)  972 90.5 5.4e-18
NP_689839 (OMIM: 603974) zinc finger protein 92 is ( 586)  924 86.8 7.2e-17
NP_001269288 (OMIM: 603989) zinc finger protein 10 ( 852)  899 85.2 3.2e-16
NP_775802 (OMIM: 603982) zinc finger protein 100 [ ( 542)  895 84.5 3.3e-16
NP_001092096 (OMIM: 603980) zinc finger protein 98 ( 572)  889 84.1 4.7e-16
XP_016881605 (OMIM: 603984) PREDICTED: zinc finger ( 504)  884 83.6 5.8e-16
NP_003414 (OMIM: 603972) zinc finger protein 43 is ( 809)  867 82.7 1.7e-15
NP_001243582 (OMIM: 603972) zinc finger protein 43 ( 818)  867 82.7 1.7e-15
NP_001073878 (OMIM: 603981) zinc finger protein 99 ( 864)  862 82.3 2.3e-15
NP_975011 (OMIM: 604768) zinc finger protein 254 i ( 659)  857 81.7 2.7e-15
NP_001258568 (OMIM: 604080) zinc finger protein 13 ( 319)  837 79.5   6e-15
NP_003421 (OMIM: 603971) zinc finger protein 91 is (1191)  841 81.0 8.1e-15
XP_016882697 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
XP_016882702 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
XP_011526559 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
XP_016882701 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
XP_016882703 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
XP_016882699 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
NP_001243578 (OMIM: 603972) zinc finger protein 43 ( 803)  832 80.0 1.1e-14
XP_016882704 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
NP_001243579 (OMIM: 603972) zinc finger protein 43 ( 803)  832 80.0 1.1e-14
XP_016882705 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
XP_016882700 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
NP_001243577 (OMIM: 603972) zinc finger protein 43 ( 803)  832 80.0 1.1e-14
XP_011526561 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
XP_016882698 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
XP_016882696 (OMIM: 603972) PREDICTED: zinc finger ( 803)  832 80.0 1.1e-14
XP_016882746 (OMIM: 603977) PREDICTED: zinc finger (1168)  829 80.1 1.5e-14
NP_009084 (OMIM: 603977) zinc finger protein 208 i (1280)  829 80.1 1.6e-14
XP_016867184 (OMIM: 604756) PREDICTED: zinc finger ( 504)  792 76.5   8e-14
XP_016867180 (OMIM: 604756) PREDICTED: zinc finger ( 504)  792 76.5   8e-14
XP_016867185 (OMIM: 604756) PREDICTED: zinc finger ( 504)  792 76.5   8e-14
XP_016867179 (OMIM: 604756) PREDICTED: zinc finger ( 504)  792 76.5   8e-14
XP_016867178 (OMIM: 604756) PREDICTED: zinc finger ( 504)  792 76.5   8e-14
XP_016867183 (OMIM: 604756) PREDICTED: zinc finger ( 504)  792 76.5   8e-14
XP_016867187 (OMIM: 604756) PREDICTED: zinc finger ( 504)  792 76.5   8e-14
XP_016867186 (OMIM: 604756) PREDICTED: zinc finger ( 504)  792 76.5   8e-14
XP_016867182 (OMIM: 604756) PREDICTED: zinc finger ( 504)  792 76.5   8e-14
XP_016867181 (OMIM: 604756) PREDICTED: zinc finger ( 504)  792 76.5   8e-14


>>NP_009069 (OMIM: 603973) zinc finger protein 90 [Homo   (601 aa)
 initn: 1337 init1: 1337 opt: 1337  Z-score: 596.2  bits: 118.7 E(85289): 1.8e-26
Smith-Waterman score: 1337; 100.0% identity (100.0% similar) in 195 aa overlap (1-195:1-195)

               10        20        30        40        50        60
pF1KB9 MGPLEFRDVAIEFSLEEWHCLDTAQQNLYRDVMLENYRHLVFLGIVVTKPDLITCLEQGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MGPLEFRDVAIEFSLEEWHCLDTAQQNLYRDVMLENYRHLVFLGIVVTKPDLITCLEQGK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPFTVKRHEMIAKSPVMCFHFAQDLCPEQSLKDSFQKVIVTRYEKREYGNLELKKGCESV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 KPFTVKRHEMIAKSPVMCFHFAQDLCPEQSLKDSFQKVIVTRYEKREYGNLELKKGCESV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 DEGKVHKRGYNGLNQCLTATQSKVFQCDTYVKVSHIFSNSNRHKIRDTGKKPFKCIECGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 DEGKVHKRGYNGLNQCLTATQSKVFQCDTYVKVSHIFSNSNRHKIRDTGKKPFKCIECGK
              130       140       150       160       170       180

              190                                                  
pF1KB9 AFNQSSTLATHKKIH                                             
       :::::::::::::::                                             
NP_009 AFNQSSTLATHKKIHTGEITCKCEECGKAFNRSSHLTSHKRIHTGEKRYKCEDCGKELKY
              190       200       210       220       230       240

>>NP_001152765 (OMIM: 603984) zinc finger protein 737 [H  (536 aa)
 initn: 1093 init1: 1093 opt: 1093  Z-score: 494.7  bits: 99.8 E(85289): 8.2e-21
Smith-Waterman score: 1093; 81.5% identity (91.8% similar) in 195 aa overlap (1-195:1-195)

               10        20        30        40        50        60
pF1KB9 MGPLEFRDVAIEFSLEEWHCLDTAQQNLYRDVMLENYRHLVFLGIVVTKPDLITCLEQGK
       ::::.::::::::::::::::::::.::::.:::::::.::::::::.::::::::::::
NP_001 MGPLQFRDVAIEFSLEEWHCLDTAQRNLYRNVMLENYRNLVFLGIVVSKPDLITCLEQGK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPFTVKRHEMIAKSPVMCFHFAQDLCPEQSLKDSFQKVIVTRYEKREYGNLELKKGCESV
       ::.:.:.:::.:.  : : :::.:: ::::.::::::: . :::.  . ::..:::::::
NP_001 KPLTMKKHEMVANPSVTCSHFARDLWPEQSIKDSFQKVTLRRYENYGHDNLQFKKGCESV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 DEGKVHKRGYNGLNQCLTATQSKVFQCDTYVKVSHIFSNSNRHKIRDTGKKPFKCIECGK
       :: :::::::::::: ::.::::.:::: :::: : :::::::::: :::::::::::::
NP_001 DECKVHKRGYNGLNQYLTTTQSKIFQCDKYVKVIHKFSNSNRHKIRHTGKKPFKCIECGK
              130       140       150       160       170       180

              190                                                  
pF1KB9 AFNQSSTLATHKKIH                                             
       ::::::::.::::::                                             
NP_001 AFNQSSTLTTHKKIHTGEKPFKCEECGKAFNWSSHLTTHKRIHTGEKRYKCEDCGKAFSR
              190       200       210       220       230       240

>>XP_006722660 (OMIM: 603984) PREDICTED: zinc finger pro  (550 aa)
 initn: 1093 init1: 1093 opt: 1093  Z-score: 494.6  bits: 99.8 E(85289): 8.3e-21
Smith-Waterman score: 1093; 81.5% identity (91.8% similar) in 195 aa overlap (1-195:1-195)

               10        20        30        40        50        60
pF1KB9 MGPLEFRDVAIEFSLEEWHCLDTAQQNLYRDVMLENYRHLVFLGIVVTKPDLITCLEQGK
       ::::.::::::::::::::::::::.::::.:::::::.::::::::.::::::::::::
XP_006 MGPLQFRDVAIEFSLEEWHCLDTAQRNLYRNVMLENYRNLVFLGIVVSKPDLITCLEQGK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPFTVKRHEMIAKSPVMCFHFAQDLCPEQSLKDSFQKVIVTRYEKREYGNLELKKGCESV
       ::.:.:.:::.:.  : : :::.:: ::::.::::::: . :::.  . ::..:::::::
XP_006 KPLTMKKHEMVANPSVTCSHFARDLWPEQSIKDSFQKVTLRRYENYGHDNLQFKKGCESV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 DEGKVHKRGYNGLNQCLTATQSKVFQCDTYVKVSHIFSNSNRHKIRDTGKKPFKCIECGK
       :: :::::::::::: ::.::::.:::: :::: : :::::::::: :::::::::::::
XP_006 DECKVHKRGYNGLNQYLTTTQSKIFQCDKYVKVIHKFSNSNRHKIRHTGKKPFKCIECGK
              130       140       150       160       170       180

              190                                                  
pF1KB9 AFNQSSTLATHKKIH                                             
       ::::::::.::::::                                             
XP_006 AFNQSSTLTTHKKIHTGEKPFKCEECGKAFNWSSHLTTHKRIHTGEKRYKCEDCGKAFSR
              190       200       210       220       230       240

>>XP_011525901 (OMIM: 603984) PREDICTED: zinc finger pro  (550 aa)
 initn: 1093 init1: 1093 opt: 1093  Z-score: 494.6  bits: 99.8 E(85289): 8.3e-21
Smith-Waterman score: 1093; 81.5% identity (91.8% similar) in 195 aa overlap (1-195:1-195)

               10        20        30        40        50        60
pF1KB9 MGPLEFRDVAIEFSLEEWHCLDTAQQNLYRDVMLENYRHLVFLGIVVTKPDLITCLEQGK
       ::::.::::::::::::::::::::.::::.:::::::.::::::::.::::::::::::
XP_011 MGPLQFRDVAIEFSLEEWHCLDTAQRNLYRNVMLENYRNLVFLGIVVSKPDLITCLEQGK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPFTVKRHEMIAKSPVMCFHFAQDLCPEQSLKDSFQKVIVTRYEKREYGNLELKKGCESV
       ::.:.:.:::.:.  : : :::.:: ::::.::::::: . :::.  . ::..:::::::
XP_011 KPLTMKKHEMVANPSVTCSHFARDLWPEQSIKDSFQKVTLRRYENYGHDNLQFKKGCESV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 DEGKVHKRGYNGLNQCLTATQSKVFQCDTYVKVSHIFSNSNRHKIRDTGKKPFKCIECGK
       :: :::::::::::: ::.::::.:::: :::: : :::::::::: :::::::::::::
XP_011 DECKVHKRGYNGLNQYLTTTQSKIFQCDKYVKVIHKFSNSNRHKIRHTGKKPFKCIECGK
              130       140       150       160       170       180

              190                                                  
pF1KB9 AFNQSSTLATHKKIH                                             
       ::::::::.::::::                                             
XP_011 AFNQSSTLTTHKKIHTGEKPFKCEECGKAFNWSSHLTTHKRIHTGEKRYKCEDCGKAFSR
              190       200       210       220       230       240

>>XP_011525900 (OMIM: 603984) PREDICTED: zinc finger pro  (551 aa)
 initn: 1093 init1: 1093 opt: 1093  Z-score: 494.6  bits: 99.8 E(85289): 8.3e-21
Smith-Waterman score: 1093; 81.5% identity (91.8% similar) in 195 aa overlap (1-195:1-195)

               10        20        30        40        50        60
pF1KB9 MGPLEFRDVAIEFSLEEWHCLDTAQQNLYRDVMLENYRHLVFLGIVVTKPDLITCLEQGK
       ::::.::::::::::::::::::::.::::.:::::::.::::::::.::::::::::::
XP_011 MGPLQFRDVAIEFSLEEWHCLDTAQRNLYRNVMLENYRNLVFLGIVVSKPDLITCLEQGK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPFTVKRHEMIAKSPVMCFHFAQDLCPEQSLKDSFQKVIVTRYEKREYGNLELKKGCESV
       ::.:.:.:::.:.  : : :::.:: ::::.::::::: . :::.  . ::..:::::::
XP_011 KPLTMKKHEMVANPSVTCSHFARDLWPEQSIKDSFQKVTLRRYENYGHDNLQFKKGCESV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 DEGKVHKRGYNGLNQCLTATQSKVFQCDTYVKVSHIFSNSNRHKIRDTGKKPFKCIECGK
       :: :::::::::::: ::.::::.:::: :::: : :::::::::: :::::::::::::
XP_011 DECKVHKRGYNGLNQYLTTTQSKIFQCDKYVKVIHKFSNSNRHKIRHTGKKPFKCIECGK
              130       140       150       160       170       180

              190                                                  
pF1KB9 AFNQSSTLATHKKIH                                             
       ::::::::.::::::                                             
XP_011 AFNQSSTLTTHKKIHTGEKPFKCEECGKAFNWSSHLTTHKRIHTGEKRYKCEDCGKAFSR
              190       200       210       220       230       240

>>XP_005259754 (OMIM: 603984) PREDICTED: zinc finger pro  (551 aa)
 initn: 1093 init1: 1093 opt: 1093  Z-score: 494.6  bits: 99.8 E(85289): 8.3e-21
Smith-Waterman score: 1093; 81.5% identity (91.8% similar) in 195 aa overlap (1-195:1-195)

               10        20        30        40        50        60
pF1KB9 MGPLEFRDVAIEFSLEEWHCLDTAQQNLYRDVMLENYRHLVFLGIVVTKPDLITCLEQGK
       ::::.::::::::::::::::::::.::::.:::::::.::::::::.::::::::::::
XP_005 MGPLQFRDVAIEFSLEEWHCLDTAQRNLYRNVMLENYRNLVFLGIVVSKPDLITCLEQGK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPFTVKRHEMIAKSPVMCFHFAQDLCPEQSLKDSFQKVIVTRYEKREYGNLELKKGCESV
       ::.:.:.:::.:.  : : :::.:: ::::.::::::: . :::.  . ::..:::::::
XP_005 KPLTMKKHEMVANPSVTCSHFARDLWPEQSIKDSFQKVTLRRYENYGHDNLQFKKGCESV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 DEGKVHKRGYNGLNQCLTATQSKVFQCDTYVKVSHIFSNSNRHKIRDTGKKPFKCIECGK
       :: :::::::::::: ::.::::.:::: :::: : :::::::::: :::::::::::::
XP_005 DECKVHKRGYNGLNQYLTTTQSKIFQCDKYVKVIHKFSNSNRHKIRHTGKKPFKCIECGK
              130       140       150       160       170       180

              190                                                  
pF1KB9 AFNQSSTLATHKKIH                                             
       ::::::::.::::::                                             
XP_005 AFNQSSTLTTHKKIHTGEKPFKCEECGKAFNWSSHLTTHKRIHTGEKRYKCEDCGKAFSR
              190       200       210       220       230       240

>>NP_112495 (OMIM: 603975) zinc finger protein 93 [Homo   (620 aa)
 initn: 1043 init1: 1043 opt: 1043  Z-score: 473.3  bits: 96.0 E(85289): 1.3e-19
Smith-Waterman score: 1043; 79.5% identity (88.7% similar) in 195 aa overlap (1-195:1-195)

               10        20        30        40        50        60
pF1KB9 MGPLEFRDVAIEFSLEEWHCLDTAQQNLYRDVMLENYRHLVFLGIVVTKPDLITCLEQGK
       ::::.::::::::::::::::::::.::::.:::::: .::::::::.:::::. :::::
NP_112 MGPLQFRDVAIEFSLEEWHCLDTAQRNLYRNVMLENYSNLVFLGIVVSKPDLIAHLEQGK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 KPFTVKRHEMIAKSPVMCFHFAQDLCPEQSLKDSFQKVIVTRYEKREYGNLELKKGCESV
       ::.:.:::::.:.  :.: :::::: :::..::::::::. ::::: .:::.: : ::::
NP_112 KPLTMKRHEMVANPSVICSHFAQDLWPEQNIKDSFQKVILRRYEKRGHGNLQLIKRCESV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 DEGKVHKRGYNGLNQCLTATQSKVFQCDTYVKVSHIFSNSNRHKIRDTGKKPFKCIECGK
       :: :::  :::::::: :.::::::::: : :: : :::::::.:: : :::::::::::
NP_112 DECKVHTGGYNGLNQCSTTTQSKVFQCDKYGKVFHKFSNSNRHNIRHTEKKPFKCIECGK
              130       140       150       160       170       180

              190                                                  
pF1KB9 AFNQSSTLATHKKIH                                             
       :::: ::: ::::::                                             
NP_112 AFNQFSTLITHKKIHTGEKPYICEECGKAFKYSSALNTHKRIHTGEKPYKCDKCDKAFIA
              190       200       210       220       230       240

>>NP_066971 (OMIM: 604756) zinc finger protein 273 [Homo  (569 aa)
 initn: 1470 init1: 991 opt: 991  Z-score: 451.9  bits: 92.0 E(85289): 2e-18
Smith-Waterman score: 991; 74.6% identity (87.6% similar) in 193 aa overlap (1-193:34-226)

                                             10        20        30
pF1KB9                               MGPLEFRDVAIEFSLEEWHCLDTAQQNLYR
                                     :::: :::::::::::::.::::.::::::
NP_066 APRGPPSVAPLPAGIGRSTAKTPGLPGSLEMGPLTFRDVAIEFSLEEWQCLDTSQQNLYR
            10        20        30        40        50        60   

               40        50        60        70        80        90
pF1KB9 DVMLENYRHLVFLGIVVTKPDLITCLEQGKKPFTVKRHEMIAKSPVMCFHFAQDLCPEQS
       .:::.:::.::::::.:.::::::::::::.: ..::: :.:: ::.: :::::: :.:.
NP_066 NVMLDNYRNLVFLGIAVSKPDLITCLEQGKEPCNMKRHAMVAKPPVVCSHFAQDLWPKQG
            70        80        90       100       110       120   

              100       110       120       130       140       150
pF1KB9 LKDSFQKVIVTRYEKREYGNLELKKGCESVDEGKVHKRGYNGLNQCLTATQSKVFQCDTY
       :::::::::. :: :  . ::.:.:::.:.:: :::::::::::::::.::::.:::: :
NP_066 LKDSFQKVILRRYGKYGHENLQLRKGCKSADEHKVHKRGYNGLNQCLTTTQSKIFQCDKY
           130       140       150       160       170       180   

              160       170       180       190                    
pF1KB9 VKVSHIFSNSNRHKIRDTGKKPFKCIECGKAFNQSSTLATHKKIH               
       ::: : ::::: :: :.:::::::: ::::.    : :. :::                 
NP_066 VKVLHKFSNSNIHKKRQTGKKPFKCKECGKSCCILSQLTQHKKTATRVNFYKCKTCGKAF
           190       200       210       220       230       240   

NP_066 NQFSNLTKHKIIHPEVNPYKCEECGKAFNQSLTLTKHKKIHTEEKPYKCEDCGKVFSVFS
           250       260       270       280       290       300   

>>XP_016867177 (OMIM: 604756) PREDICTED: zinc finger pro  (569 aa)
 initn: 1470 init1: 991 opt: 991  Z-score: 451.9  bits: 92.0 E(85289): 2e-18
Smith-Waterman score: 991; 74.6% identity (87.6% similar) in 193 aa overlap (1-193:34-226)

                                             10        20        30
pF1KB9                               MGPLEFRDVAIEFSLEEWHCLDTAQQNLYR
                                     :::: :::::::::::::.::::.::::::
XP_016 APRGPPSVAPLPAGIGRSTAKTPGLPGSLEMGPLTFRDVAIEFSLEEWQCLDTSQQNLYR
            10        20        30        40        50        60   

               40        50        60        70        80        90
pF1KB9 DVMLENYRHLVFLGIVVTKPDLITCLEQGKKPFTVKRHEMIAKSPVMCFHFAQDLCPEQS
       .:::.:::.::::::.:.::::::::::::.: ..::: :.:: ::.: :::::: :.:.
XP_016 NVMLDNYRNLVFLGIAVSKPDLITCLEQGKEPCNMKRHAMVAKPPVVCSHFAQDLWPKQG
            70        80        90       100       110       120   

              100       110       120       130       140       150
pF1KB9 LKDSFQKVIVTRYEKREYGNLELKKGCESVDEGKVHKRGYNGLNQCLTATQSKVFQCDTY
       :::::::::. :: :  . ::.:.:::.:.:: :::::::::::::::.::::.:::: :
XP_016 LKDSFQKVILRRYGKYGHENLQLRKGCKSADEHKVHKRGYNGLNQCLTTTQSKIFQCDKY
           130       140       150       160       170       180   

              160       170       180       190                    
pF1KB9 VKVSHIFSNSNRHKIRDTGKKPFKCIECGKAFNQSSTLATHKKIH               
       ::: : ::::: :: :.:::::::: ::::.    : :. :::                 
XP_016 VKVLHKFSNSNIHKKRQTGKKPFKCKECGKSCCILSQLTQHKKTATRVNFYKCKTCGKAF
           190       200       210       220       230       240   

XP_016 NQFSNLTKHKIIHPEVNPYKCEECGKAFNQSLTLTKHKKIHTEEKPYKCEDCGKVFSVFS
           250       260       270       280       290       300   

>>NP_003420 (OMIM: 603899) zinc finger protein 85 isofor  (595 aa)
 initn: 595 init1: 595 opt: 976  Z-score: 445.5  bits: 90.8 E(85289): 4.5e-18
Smith-Waterman score: 976; 72.4% identity (87.8% similar) in 196 aa overlap (1-195:1-196)

               10        20        30        40        50        60
pF1KB9 MGPLEFRDVAIEFSLEEWHCLDTAQQNLYRDVMLENYRHLVFLGIVVTKPDLITCLEQGK
       :::: ::::::::::.::.::::::.::::.:::::::.::::::.:.::::::::::::
NP_003 MGPLTFRDVAIEFSLKEWQCLDTAQRNLYRNVMLENYRNLVFLGITVSKPDLITCLEQGK
               10        20        30        40        50        60

                70        80        90       100       110         
pF1KB9 KPFTVKRHE-MIAKSPVMCFHFAQDLCPEQSLKDSFQKVIVTRYEKREYGNLELKKGCES
       . ...:::: :.::  ::: :::::: :::..::::::: . :: : .. :: :.:::::
NP_003 EAWSMKRHEIMVAKPTVMCSHFAQDLWPEQNIKDSFQKVTLKRYGKCRHENLPLRKGCES
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB9 VDEGKVHKRGYNGLNQCLTATQSKVFQCDTYVKVSHIFSNSNRHKIRDTGKKPFKCIECG
       .:: :.:: : :::::::::::::.:::: ::::.: :::::::.:: : :::::: .::
NP_003 MDECKMHKGGCNGLNQCLTATQSKIFQCDKYVKVAHKFSNSNRHEIRHTKKKPFKCTKCG
              130       140       150       160       170       180

     180       190                                                 
pF1KB9 KAFNQSSTLATHKKIH                                            
       :.:.. : :. :..::                                            
NP_003 KSFGMISCLTEHSRIHTRVNFYKCEECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFN
              190       200       210       220       230       240




195 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 18:19:30 2016 done: Fri Nov  4 18:19:31 2016
 Total Scan time:  5.670 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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