(Linear) (Six-base) MAPSORT of: KIBB9171.seq Check: 6797 from: 1 to: 2007 KIBB9171.orf With 182 enzymes: SgfI * March 3, 2008 11:10 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 740 858 1410 2007 Size: 740 118 552 597 Fragments arranged by size: 740 597 552 118 AatII G_ACGT'C Cuts at: 0 1286 1931 2007 Size: 1286 645 76 Fragments arranged by size: 1286 645 76 AgeI A'CCGG_T Cuts at: 0 1654 2007 Size: 1654 353 AlwNI CAG_nnn'CTG Cuts at: 0 255 325 864 873 960 1453 1515 1938 Size: 255 70 539 9 87 493 62 423 Cuts at: 1938 2007 Size: 69 Fragments arranged by size: 539 493 423 255 87 70 69 62 9 ApaI G_GGCC'C Cuts at: 0 1762 2007 Size: 1762 245 ApaLI G'TGCA_C Cuts at: 0 187 517 2007 Size: 187 330 1490 Fragments arranged by size: 1490 330 187 AvaI C'yCGr_G Cuts at: 0 61 288 394 1355 1865 2007 Size: 61 227 106 961 510 142 Fragments arranged by size: 961 510 227 142 106 61 AvrII C'CTAG_G Cuts at: 0 231 1896 2007 Size: 231 1665 111 Fragments arranged by size: 1665 231 111 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 0 276 309 2007 Size: 276 33 1698 Fragments arranged by size: 1698 276 33 BamHI G'GATC_C Cuts at: 0 494 533 1856 2007 Size: 494 39 1323 151 Fragments arranged by size: 1323 494 151 39 BanI G'GyrC_C Cuts at: 0 398 581 999 1884 2007 Size: 398 183 418 885 123 Fragments arranged by size: 885 418 398 183 123 BanII G_rGCy'C Cuts at: 0 1105 1189 1509 1762 2007 Size: 1105 84 320 253 245 Fragments arranged by size: 1105 320 253 245 84 BbeI G_GCGC'C Cuts at: 0 1003 2007 Size: 1003 1004 BciVI GTATCCnnnnn_n' Cuts at: 0 216 2007 Size: 216 1791 BglI GCCn_nnn'nGGC Cuts at: 0 160 322 396 1757 2007 Size: 160 162 74 1361 250 Fragments arranged by size: 1361 250 162 160 74 Bme1580I G_kGCm'C Cuts at: 0 191 401 521 1017 1038 1762 2007 Size: 191 210 120 496 21 724 245 Fragments arranged by size: 724 496 245 210 191 120 21 BmrI ACTGGGnnnn_n' Cuts at: 0 519 2007 Size: 519 1488 BmtI G_CTAG'C Cuts at: 0 1852 2007 Size: 1852 155 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1851 2007 Size: 1851 156 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 377 922 940 1054 1430 1535 1846 1981 Size: 377 545 18 114 376 105 311 135 Cuts at: 1981 2007 Size: 26 Fragments arranged by size: 545 377 376 311 135 114 105 26 18 Bpu10I CC'TnA_GC Cuts at: 0 83 764 1666 2007 Size: 83 681 902 341 Fragments arranged by size: 902 681 341 83 BsaI GGTCTCn'nnnn_ Cuts at: 0 214 783 2007 Size: 214 569 1224 Fragments arranged by size: 1224 569 214 BsaAI yAC'GTr Cuts at: 0 714 2007 Size: 714 1293 BsaHI Gr'CG_yC Cuts at: 0 272 1000 1283 1928 2007 Size: 272 728 283 645 79 Fragments arranged by size: 728 645 283 272 79 BsaWI w'CCGG_w Cuts at: 0 259 1654 2007 Size: 259 1395 353 Fragments arranged by size: 1395 353 259 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 925 955 1954 1984 2007 Size: 925 30 999 30 23 Fragments arranged by size: 999 925 30 30 23 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 187 256 1330 1375 1587 1843 2007 Size: 187 69 1074 45 212 256 164 Fragments arranged by size: 1074 256 212 187 164 69 45 BseYI C'CCAG_C Cuts at: 0 177 559 963 1105 1734 1844 2007 Size: 177 382 404 142 629 110 163 Fragments arranged by size: 629 404 382 177 163 142 110 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 446 712 1163 1358 1754 2007 Size: 446 266 451 195 396 253 Fragments arranged by size: 451 446 396 266 253 195 BsiEI CG_ry'CG Cuts at: 0 885 2007 Size: 885 1122 BsiHKAI G_wGCw'C Cuts at: 0 191 353 521 1189 2007 Size: 191 162 168 668 818 Fragments arranged by size: 818 668 191 168 162 Bsp1286I G_dGCh'C Cuts at: 0 191 353 401 521 1017 1038 1105 1189 Size: 191 162 48 120 496 21 67 84 Cuts at: 1189 1509 1762 2007 Size: 320 253 245 Fragments arranged by size: 496 320 253 245 191 162 120 84 67 48 21 BspEI T'CCGG_A Cuts at: 0 259 2007 Size: 259 1748 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 683 740 858 1410 2007 Size: 683 57 118 552 597 Fragments arranged by size: 683 597 552 118 57 BsrDI GCAATG_nn' Cuts at: 0 1790 2007 Size: 1790 217 BsrFI r'CCGG_y Cuts at: 0 877 1544 1654 2007 Size: 877 667 110 353 Fragments arranged by size: 877 667 353 110 BssHII G'CGCG_C Cuts at: 0 305 2007 Size: 305 1702 BssSI C'ACGA_G Cuts at: 0 1342 2007 Size: 1342 665 BstAPI GCAn_nnn'nTGC Cuts at: 0 735 2007 Size: 735 1272 BstEII G'GTnAC_C Cuts at: 0 967 2007 Size: 967 1040 BstYI r'GATC_y Cuts at: 0 494 533 1856 2007 Size: 494 39 1323 151 Fragments arranged by size: 1323 494 151 39 Bsu36I CC'TnA_GG Cuts at: 0 812 1309 2007 Size: 812 497 698 Fragments arranged by size: 812 698 497 BtgI C'CryG_G Cuts at: 0 402 522 1500 1746 2007 Size: 402 120 978 246 261 Fragments arranged by size: 978 402 261 246 120 BtsI GCAGTG_nn' Cuts at: 0 300 644 1370 1639 1990 2007 Size: 300 344 726 269 351 17 Fragments arranged by size: 726 351 344 300 269 17 DraIII CAC_nnn'GTG Cuts at: 0 2001 2007 Size: 2001 6 DrdI GACnn_nn'nnGTC Cuts at: 0 562 2007 Size: 562 1445 EaeI y'GGCC_r Cuts at: 0 35 314 405 449 525 875 882 1743 Size: 35 279 91 44 76 350 7 861 Cuts at: 1743 2007 Size: 264 Fragments arranged by size: 861 350 279 264 91 76 44 35 7 EagI C'GGCC_G Cuts at: 0 882 2007 Size: 882 1125 EarI CTCTTCn'nnn_ Cuts at: 0 164 1057 2007 Size: 164 893 950 Fragments arranged by size: 950 893 164 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 946 2007 Size: 946 1061 EcoICRI GAG'CTC Cuts at: 0 1187 2007 Size: 1187 820 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 377 922 940 1054 1430 1535 1846 1981 Size: 377 545 18 114 376 105 311 135 Cuts at: 1981 2007 Size: 26 Fragments arranged by size: 545 377 376 311 135 114 105 26 18 EcoNI CCTnn'n_nnAGG Cuts at: 0 235 1312 1332 1825 1895 2007 Size: 235 1077 20 493 70 112 Fragments arranged by size: 1077 493 235 112 70 20 EcoO109I rG'GnC_Cy Cuts at: 0 228 654 807 1050 1365 1738 1758 1759 Size: 228 426 153 243 315 373 20 1 Cuts at: 1759 1900 1935 2007 Size: 141 35 72 Fragments arranged by size: 426 373 315 243 228 153 141 72 35 20 1 EcoRV GAT'ATC Cuts at: 0 1260 2007 Size: 1260 747 HaeII r_GCGC'y Cuts at: 0 90 256 603 1003 1735 2007 Size: 90 166 347 400 732 272 Fragments arranged by size: 732 400 347 272 166 90 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 63 95 190 222 525 557 641 673 Size: 63 32 95 32 303 32 84 32 Cuts at: 673 2007 Size: 1334 Fragments arranged by size: 1334 303 95 84 63 32 32 32 32 HincII GTy'rAC Cuts at: 0 672 2007 Size: 672 1335 KasI G'GCGC_C Cuts at: 0 999 2007 Size: 999 1008 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 1314 2007 Size: 1314 693 MscI TGG'CCA Cuts at: 0 407 451 527 1745 2007 Size: 407 44 76 1218 262 Fragments arranged by size: 1218 407 262 76 44 MslI CAynn'nnrTG Cuts at: 0 587 2007 Size: 587 1420 MspA1I CmG'CkG Cuts at: 0 336 460 861 1090 1171 1237 1539 1959 Size: 336 124 401 229 81 66 302 420 Cuts at: 1959 2007 Size: 48 Fragments arranged by size: 420 401 336 302 229 124 81 66 48 NaeI GCC'GGC Cuts at: 0 879 2007 Size: 879 1128 NarI GG'CG_CC Cuts at: 0 1000 2007 Size: 1000 1007 NcoI C'CATG_G Cuts at: 0 402 522 1746 2007 Size: 402 120 1224 261 Fragments arranged by size: 1224 402 261 120 NgoMIV G'CCGG_C Cuts at: 0 877 2007 Size: 877 1130 NheI G'CTAG_C Cuts at: 0 1848 2007 Size: 1848 159 NspI r_CATG'y Cuts at: 0 469 2007 Size: 469 1538 PasI CC'CwG_GG Cuts at: 0 1530 2007 Size: 1530 477 PfoI T'CCnGG_A Cuts at: 0 1193 1823 2007 Size: 1193 630 184 Fragments arranged by size: 1193 630 184 PpuMI rG'GwC_Cy Cuts at: 0 228 807 2007 Size: 228 579 1200 Fragments arranged by size: 1200 579 228 PshAI GACnn'nnGTC Cuts at: 0 226 2007 Size: 226 1781 PspOMI G'GGCC_C Cuts at: 0 1758 2007 Size: 1758 249 PstI C_TGCA'G Cuts at: 0 251 335 869 1461 1757 2007 Size: 251 84 534 592 296 250 Fragments arranged by size: 592 534 296 251 250 84 PvuII CAG'CTG Cuts at: 0 336 460 861 1171 1539 1959 2007 Size: 336 124 401 310 368 420 48 Fragments arranged by size: 420 401 368 336 310 124 48 SacI G_AGCT'C Cuts at: 0 1189 2007 Size: 1189 818 SanDI GG'GwC_CC Cuts at: 0 807 2007 Size: 807 1200 SapI GCTCTTCn'nnn_ Cuts at: 0 1057 2007 Size: 1057 950 SbfI CC_TGCA'GG Cuts at: 0 1757 2007 Size: 1757 250 SexAI A'CCwGG_T Cuts at: 0 686 1718 1997 2007 Size: 686 1032 279 10 Fragments arranged by size: 1032 686 279 10 SfcI C'TryA_G Cuts at: 0 247 331 865 1457 1753 2007 Size: 247 84 534 592 296 254 Fragments arranged by size: 592 534 296 254 247 84 SfiI GGCCn_nnn'nGGCC Cuts at: 0 1757 2007 Size: 1757 250 SfoI GGC'GCC Cuts at: 0 1001 2007 Size: 1001 1006 SmaI CCC'GGG Cuts at: 0 396 1357 1867 2007 Size: 396 961 510 140 Fragments arranged by size: 961 510 396 140 StuI AGG'CCT Cuts at: 0 163 390 1131 1493 2007 Size: 163 227 741 362 514 Fragments arranged by size: 741 514 362 227 163 StyI C'CwwG_G Cuts at: 0 231 402 522 1746 1896 2007 Size: 231 171 120 1224 150 111 Fragments arranged by size: 1224 231 171 150 120 111 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 955 2007 Size: 955 1052 TatI w'GTAC_w Cuts at: 0 951 2007 Size: 951 1056 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 121 153 925 957 1189 1211 1221 1243 Size: 121 32 772 32 232 22 10 22 Cuts at: 1243 1954 1986 2007 Size: 711 32 21 Fragments arranged by size: 772 711 232 121 32 32 32 22 22 21 10 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 1473 2007 Size: 1473 534 XmaI C'CCGG_G Cuts at: 0 394 1355 1865 2007 Size: 394 961 510 142 Fragments arranged by size: 961 510 394 142 ZraI GAC'GTC Cuts at: 0 1284 1929 2007 Size: 1284 645 78 Fragments arranged by size: 1284 645 78 Enzymes that do cut: AarI AatII AgeI AlwNI ApaI ApaLI AvaI AvrII BaeI BamHI BanI BanII BbeI BciVI BglI Bme1580I BmrI BmtI BplI BpmI Bpu10I BsaI BsaAI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI Bsp1286I BspEI BspMI BsrDI BsrFI BssHII BssSI BstAPI BstEII BstYI Bsu36I BtgI BtsI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRV HaeII Hin4I HincII KasI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NheI NspI PasI PfoI PpuMI PshAI PspOMI PstI PvuII SacI SanDI SapI SbfI SexAI SfcI SfiI SfoI SmaI StuI StyI TaqII TatI TstI XcmI XmaI ZraI Enzymes that do not cut: AccI Acc65I AclI AcuI AfeI AflII AflIII AhdI AleI AlfI AloI ApoI AscI AseI AsiSI BbsI BbvCI BcgI BclI BfrBI BglII BlpI BmgBI BpuEI BsaBI BsiWI BsmI BsmBI BspHI BsrBI BsrGI BstBI BstXI BstZ17I BtgZI ClaI CspCI DraI EcoRI FalI FseI FspI FspAI HindIII HpaI KpnI MfeI MluI NdeI NotI NruI NsiI PacI PciI PflMI PmeI PmlI PpiI PsiI PspXI PsrI PvuI RsrII SacII SalI ScaI SgfI SgrAI SmlI SnaBI SpeI SphI SrfI SspI SwaI Tth111I XbaI XhoI XmnI