GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:31:36

Sequence gi568815578r:21411926_21613669 : 201744 bp : 43.05% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2949   3666  718  2  1   68   77   451 0.013  37.03
 1.02 Term +   5595   6955 1361  1  2   -1   47   321 0.009  10.69
 1.03 PlyA +   7161   7166    6                               1.05

 2.03 PlyA -   8125   8120    6                               1.05
 2.02 Term -  31294  31180  115  0  1   16   42   122 0.088  -1.56
 2.01 Init -  39591  39551   41  0  2   74   98    31 0.197   2.38
 2.00 Prom -  57102  57063   40                              -1.66

 3.11 PlyA -  57504  57499    6                               1.05
 3.10 Term -  69821  68937  885  2  0   13   41   307 0.302  10.99
 3.09 Intr -  71020  70366  655  0  1    4   36   329 0.117  11.18
 3.08 Intr -  77739  77639  101  0  2   60   77    74 0.796   2.41
 3.07 Intr -  86887  86857   31  0  1   14   93    77 0.059  -1.07
 3.06 Intr -  88798  88619  180  0  0  101   38   101 0.116   5.38
 3.05 Intr -  89669  89583   87  1  0   99   37    80 0.138   3.09
 3.04 Intr -  94691  94418  274  0  1   53  117   183 0.655  14.30
 3.03 Intr -  98295  98216   80  2  2  100   76    26 0.591   1.79
 3.02 Intr - 100560 100002  559  1  1  115   85   919 0.845  86.19
 3.01 Init - 101744 101486  259  2  1   83  105   538 0.999  52.30
 3.00 Prom - 102176 102137   40                              -8.56

 4.04 PlyA - 103002 102997    6                               1.05
 4.03 Term - 107698 107594  105  1  0   73   44   107 0.383   3.21
 4.02 Intr - 110477 110288  190  1  1   99   80    87 0.189   8.59
 4.01 Init - 144815 144697  119  2  2   81  115    20 0.157   3.67
 4.00 Prom - 148013 147974   40                              -4.16

 5.05 PlyA - 151458 151453    6                               1.05
 5.04 Term - 160094 159969  126  2  0   50   53   100 0.369   0.98
 5.03 Intr - 164685 164555  131  1  2   87   66    71 0.714   5.21
 5.02 Intr - 167558 167403  156  0  0   62   36    92 0.532   1.38
 5.01 Init - 171825 171753   73  0  1  111  110    43 0.894   8.05
 5.00 Prom - 187136 187097   40                              -2.56


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +   5636   6955 1320  1  0   78   47   293 0.893  20.29


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:21411926_21613669|GENSCAN_predicted_peptide_1|692_aa
MRKNQCKNAEDSKNQNAASPPKVHNSLPAREQNWTENKFDKLTEVGIRRWVINSSELKEH
VLTQCKEAKNLDKRLQELLTIIASLEKNINDLMELKNTARELHEVYASINSQIDQVEERI
SEIEDQLNEIKCEDKIREKRMKRNEQSLQEIWDYVKRPNLRWIGVPESDRENGTKLENTL
PDITQENFPNLARQANIQIQEIQRTPQRYSSRRATPRYIIIRFTKVEMKEKMVRAAREKE
TQQKEKISGQYPMMNTDAKILNKILANQIQQHIKKLIHHDQVSFIPGMQGWFNICKSINV
IHHINKTNDKNHMIISIDAEKPFDKIQHPFMLKILSKLGIDGTYLKIIRAIYDKPTANIV
LNGKNLDTFPLKTHTRQGCPFSPLLFNIVLEVPAKAVRQEKEIKGIQIGKEEVKLSLFAD
DMTVYLENPIISAPKLLKLISNFSKVTGYKINVQKSQAFLYSSNSQIMSELPFTIATKRI
KYLGMQLTRDVKDLFKENYKPLLKEIREDTNKWKNIPCSWIGRINIVKMTILPKVIFRFN
AIAIKLQLAFFAELEKTTLNFIWNQKRTHIAKAILSKKNKAGGIMIPDFKLYYKDTVTKA
AWYWYQNRYIDQWNRTEALEITPHIYQPKCPSMIDWIKKMWHIHTMEYCAAIKKDEFMSF
VGTWMKLETIILSKLSQGQKTKHHMFSLIGGN

>gi568815578r:21411926_21613669|GENSCAN_predicted_CDS_1|2079_bp
atgaggaaaaaccagtgcaaaaatgctgaagattccaaaaaccagaatgctgcttctcct
ccaaaggttcacaactccttgccagcaagggaacaaaactggacagagaataagtttgac
aaattgacagaagtaggcatcagaagatgggtaataaactcctctgagctaaaggagcat
gttctaacccaatgcaaggaagctaagaaccttgataaaaggttacaggaactgctaact
ataatagccagtttagagaagaacataaatgacctgatggagctgaaaaacacagcaaga
gaacttcatgaagtatacgcaagtatcaatagccaaattgatcaagtggaagaaaggata
tcagagattgaagatcaacttaatgaaatcaagtgtgaagacaagattagagaaaaaaga
atgaagaggaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaaccta
cgttggattggtgtacctgaaagtgacagggagaatggaaccaagttggaaaacacactt
ccggatattacccaggagaacttccctaacctagcaagacaggccaacattcaaattcag
gaaatacagagaacaccacaaagatactcctcaagaagagcaaccccaagatacataatc
atcagattcaccaaggttgaaatgaaggaaaagatggtaagggcagccagagagaaagag
acacaacaaaaagagaaaatttcaggccaatatcccatgatgaacactgatgcaaaaatc
ctcaataaaatactggcaaaccaaatccagcagcacatcaaaaagcttatccaccacgat
caagtcagcttcatccctgggatgcaaggctggttcaacatatgcaaatcaataaacgta
atccatcacataaacaaaaccaatgacaaaaaccacatgattatctcaatagatgcagaa
aagccctttgataaaattcaacaccccttcatgctaaaaatactcagtaaactaggtatt
gatgggacgtatctcaaaataataagagctatttatgacaaacccacagccaatattgta
ctgaatgggaaaaacttggatacattccctttgaaaacccacacaagacaaggatgccct
ttctcaccactcctattcaacatagtattggaagttccggccaaggcagtcaggcaagag
aaagaaataaagggtattcagataggaaaagaggaagtcaaattgtctctgtttgcagat
gacatgactgtatatttagaaaaccccatcatctcagccccaaaactcctaaagctgata
agcaacttcagcaaagtcacaggatacaaaatcaatgtgcaaaaatcacaagcattctta
tacagcagtaatagccaaatcatgagtgaactcccattcacaattgctacaaagagaata
aaatacctaggaatgcaacttacaagggatgtgaaggacctcttcaaggagaactacaaa
ccactgctcaaggaaataagagaggacacaaacaaatggaaaaacattccatgctcatgg
ataggaagaatcaatatcgtgaaaatgaccatactacccaaagtaatttttagatttaat
gctattgccattaagctgcaattggctttctttgcagaattagaaaaaactactttaaat
ttcatatggaaccagaaaagaacccatatagccaaggcaatcctaagcaaaaagaacaaa
gctggaggcatcatgatacctgacttcaaactctactacaaggatacagtaaccaaagca
gcatggtactggtaccaaaacagatatatagaccaatggaacagaacagaggccttagaa
ataacaccacacatctaccaacccaaatgtccatcaatgatagactggattaagaaaatg
tggcacatacacaccatggaatactgtgcagccataaaaaaggatgagttcatgtccttt
gtagggacatggatgaagctggaaaccatcattctgagcaaactatcgcaaggacagaaa
accaaacaccacatgttctcactcataggtgggaattga

>gi568815578r:21411926_21613669|GENSCAN_predicted_peptide_2|51_aa
MQPMSHGLDELALHLAKVKMIDKPIAAQSVSCKDGERRSKLDHLPGKQFDI

>gi568815578r:21411926_21613669|GENSCAN_predicted_CDS_2|156_bp
atgcagcccatgagccatggattggatgagcttgctctacatttggcaaaggttaaaatg
attgacaagcccattgctgcccaatccgtctcctgcaaggatggggaaagacgatctaaa
ttggaccatcttcctggaaagcagtttgacatttga

>gi568815578r:21411926_21613669|GENSCAN_predicted_peptide_3|1036_aa
MSLTNTKTGFSVKDILDLPDTNDEEGSVAEGPEEENEGPEPAKRAGPLGQGALDAVQSLP
LKNPFYDSSDNPYTRWLASTEGLQYSLHGLAAGAPPQDSSSKSPEPSADESPDNDKETPG
GGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHR
YKMKRARAEKGMEVTPLPSPRRVAVPVLVRDGKPCHALKAQDLAAATFQAGIPFSAYSAQ
SLQHMQYNAQYSSASTPQYPTAHPLVQAQQWTWPLSGDWIPGLLPSSVRRSEPGCAVPPG
IVINKEANRPQRRHPSKRGNVGQQPRPARGSRVRSTRPLGPENRACAACCRRQEAPEPSV
PERLCARVRAEPGSRRRQLRISGLAARVGARLSTLKKRACERRGTIQDVQDCGRSCSSHL
AWITVPQALGYKRITWDLDKMQIRVQQPWHSAFLMSSRETLVLLGQDHTLGGKGLAGNSR
APAVTMGYNTEHILQARKADAKRQFSANTKQQLVDKCPNFITLWSWFFEKINKIDRPLAR
LIKKKREKNQIDTIKNDKGDITTDATEILPTIREYYKHLYANKLENLEEMDKFLDTYTLP
RLNQEEVESLNRPITGSEIEAIINSLPPKKSPGPDGFTAKFYQRYKEDLAPFLLKLFQSI
EKEGILPNSFYEANIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQNIKKLI
HHDQVGFIPGMQGWFNIHKSINRIKYLGVQLTRDVKDLFKENYKPLLNEIKEDTNKWKNI
PCSWIGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFMWNQKRARIAKTILS
QKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRVELSEIIPHIYIHLIFDRPDK
NNKWGKDSLFNKWCWENWLAILRKLKLDPFLTPYTKINSRWIKDLTVRPKTIKTLEENLG
NTIQAIGMGKDFMTKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTAWEKIFTI
YSSDKGLISRKNLQRT

>gi568815578r:21411926_21613669|GENSCAN_predicted_CDS_3|3111_bp
atgtcgctgaccaacacaaagacggggttttcggtcaaggacatcttagacctgccggac
accaacgatgaggagggctctgtggccgaaggtccggaggaagagaacgaggggcccgag
ccagccaagagggccgggccgctggggcagggcgccctggacgcggtgcagagcctgccc
ctgaagaaccccttctacgacagcagcgacaacccgtacacgcgctggctggccagcacc
gagggccttcagtactccctgcacggtctggctgccggggcgccccctcaggactcaagc
tccaagtccccggagccctcggccgacgagtcaccggacaatgacaaggagaccccgggc
ggcgggggggacgccggcaagaagcgaaagcggcgagtgcttttctccaaggcgcagacc
tacgagctggagcggcgctttcggcagcagcggtacctgtcggcgcccgagcgcgaacac
ctggccagcctcatccgcctcacgcccacgcaggtcaagatctggttccagaaccaccgc
tacaagatgaagcgcgcccgggccgagaaaggtatggaggtgacgcccctgccctcgccg
cgccgggtggccgtgcccgtcttggtcagggacggcaaaccatgtcacgcgctcaaagcc
caggacctggcagccgccaccttccaggcgggcattcccttttctgcctacagcgcgcag
tcgctgcagcacatgcagtacaacgcccagtacagctcggccagcaccccccagtacccg
acagcacaccccctggtccaggcccagcagtggacttggcctctctccggggactggatc
ccgggcctccttccctccagcgttcggcggtccgaaccagggtgtgcggtccccccaggc
atcgttattaataaagaggcgaataggcctcagcgccgccatccgagcaagcggggaaat
gtgggccagcagcccaggcccgcgcgcggatcccgcgtacgctccacgcgccccctcggg
ccggagaaccgagcgtgtgccgcgtgctgccgccgccaggaggcgcccgagcccagcgtt
cccgagcgtctctgcgcgcgggtccgggcagagcccgggagccgccggaggcagctgcgc
atcagcggactcgcggcccgggtcggagcccgtctcagcactctgaagaagcgtgcttgt
gagcgccgcgggacgatccaggatgtccaggattgtggacgatcctgttcttcccatctg
gcctggatcacagttcctcaagctttgggatacaaacgaatcacctgggatttggataaa
atgcagattcgtgttcagcagccctggcattctgcatttctcatgagctccagggagacg
ctggtgctgctggggcaggaccacactttgggtggcaagggcttggcaggcaattccaga
gcccctgcggtcaccatgggctacaacacggagcatattctgcaggccagaaaagctgac
gccaaaaggcagttctcagccaatacaaaacagcagttagtagataaatgccccaacttc
atcactctttggagctggttttttgaaaagatcaacaaaattgatagaccgctagcaaga
ctaataaagaagaaaagagagaagaatcaaatagacacaataaaaaatgataaaggggat
atcaccactgatgccacagaaatactacctaccatcagagaatactataaacacctctat
gcaaataaactagaaaatctagaagaaatggataaattcctggacacatacaccctccca
agactaaaccaggaagaagttgaatctctgaatagaccaataacaggttctgaaattgag
gcaataattaatagtctaccacccaaaaaaagtccaggaccagatggattcacagccaaa
ttctaccagaggtacaaagaggacctggcaccattccttctgaaactattccaatcaata
gaaaaagagggaatcctccctaactcattttatgaggccaacatcatcctgataccaaag
cctggcagagacacaaccaaaaaagagaattttagaccaatatccctgatgaacattgat
gcaaaaatcctcaataaaatactggcaaacagaatccagcagaacatcaagaagcttatc
caccatgatcaagttggcttcatccctgggatgcaaggctggttcaacatacacaaatca
ataaacagaataaaatacctaggagtccaacttacaagggatgtgaaggacctcttcaag
gagaactacaaaccactgctcaacgaaataaaagaggacacaaacaaatggaagaacatt
ccatgctcatggataggaagaatcaatattgtgaaaatggccatactgcccaaggtaatt
tatagattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaa
actactttaaagttcatgtggaaccaaaaaagagcccgcattgccaagacaatcctaagc
caaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggctaca
gtaaccaaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagagta
gagctctcagaaataataccacacatctacatccatctgatctttgacagacctgacaaa
aacaacaaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagcc
atacttagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaaga
tggattaaagacttaactgttagacctaaaaccataaaaaccctagaagaaaacctaggc
aatacaattcaggccataggcatgggcaaggacttcatgactaaaacaccaaaagcaatg
gcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagca
aaagaaactaccatcagagtgaacaggcaacctacagcatgggagaaaatttttacaatc
tactcatctgacaaagggctaatatccagaaagaacctacaaagaacttaa

>gi568815578r:21411926_21613669|GENSCAN_predicted_peptide_4|137_aa
MTVNAMWGPGFHLRTGKGHSRRAEGIQIKPGVQSLVLHPCRPARERAPGTVTAACQQRGV
SGHRRRRRAAPELGFTADPGYEPLALPGPDSARSPSRVVRTQQPLLPHWKSKPKWGCFGD
AILKVNVFIATLRDQIG

>gi568815578r:21411926_21613669|GENSCAN_predicted_CDS_4|414_bp
atgactgtgaatgcaatgtggggtcctggcttccacctgagaacaggaaaaggacatagc
agaagagctgagggaatccagataaaacctggagttcagtcactagtattgcatccatgc
cgcccggcgcgggaacgcgctccgggcacggtcaccgcggcctgccagcagagaggggtc
tcggggcaccgtcgtcgccgccgagcggcgccggagctcgggttcacggcggaccccggt
tatgagcccctcgctctcccgggtcctgactcggctcgatccccaagccgcgtagtccgg
acgcagcagcccctgctcccgcattggaagtcgaagccaaagtggggctgttttggagat
gccatccttaaggtgaacgtctttatcgccacactcagggaccagattgggtga

>gi568815578r:21411926_21613669|GENSCAN_predicted_peptide_5|161_aa
MALAPHGLSPSIWPLPSVQALEKAGHVARPHKSPFENHYHPSSFQIGGLSLLKGPKAAME
KCPKALFASLGQRSTCEILFITKSPPYSNVSGTHYCFCWFPSSSWRPPWTNQQLDANPTQ
FRPPALVCGTLLRCGRWNWHRVHFSELTFTPYSTWVFNGEP

>gi568815578r:21411926_21613669|GENSCAN_predicted_CDS_5|486_bp
atggccctagctccccacggcctgtctccttcaatctggcctctcccctctgtccaggct
ttagagaaagcaggtcatgttgctcgtccacataaaagcccattcgagaatcattatcac
ccaagcagcttccagattggcggcttatcacttctgaagggtcccaaggcggccatggag
aagtgccccaaagccttgtttgcttccttgggccaaaggtccacctgtgaaatacttttt
atcaccaagtcaccaccttactccaacgtttctggaactcactactgtttttgttggttt
ccaagcagcagctggagacctccctggaccaaccagcagctggatgcaaacccaactcag
tttcgcccaccagccctggtctgcgggacgctgctccggtgtggaaggtggaactggcat
cgagtgcatttcagtgagctcaccttcactccttattccacatgggtgttcaacggggag
ccctga