Result of FASTA (ccds) for pF1KB8857
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8857, 92 aa
  1>>>pF1KB8857 92 - 92 aa - 92 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2792+/-0.000735; mu= 9.4442+/- 0.045
 mean_var=72.0878+/-14.590, 0's: 0 Z-trim(109.7): 48  B-trim: 387 in 2/49
 Lambda= 0.151058
 statistics sampled from 11054 (11102) to 11054 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.341), width:  16
 Scan time:  1.410

The best scores are:                                      opt bits E(32554)
CCDS13736.1 S100B gene_id:6285|Hs108|chr21         (  92)  606 140.2 1.7e-34
CCDS1047.1 S100A1 gene_id:6271|Hs108|chr1          (  94)  351 84.7 9.1e-18
CCDS3391.1 S100P gene_id:6286|Hs108|chr4           (  95)  315 76.8 2.1e-15
CCDS1042.1 S100A4 gene_id:6275|Hs108|chr1          ( 101)  289 71.2 1.1e-13
CCDS1044.1 S100A2 gene_id:6273|Hs108|chr1          (  97)  284 70.1 2.3e-13
CCDS43333.1 S100Z gene_id:170591|Hs108|chr5        (  99)  277 68.6 6.8e-13
CCDS1041.2 S100A5 gene_id:6276|Hs108|chr1          (  92)  251 62.9 3.3e-11
CCDS1037.1 S100A12 gene_id:6283|Hs108|chr1         (  92)  246 61.8 6.9e-11


>>CCDS13736.1 S100B gene_id:6285|Hs108|chr21              (92 aa)
 initn: 606 init1: 606 opt: 606  Z-score: 732.9  bits: 140.2 E(32554): 1.7e-34
Smith-Waterman score: 606; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:1-92)

               10        20        30        40        50        60
pF1KB8 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET
               10        20        30        40        50        60

               70        80        90  
pF1KB8 LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE
       ::::::::::::::::::::::::::::::::
CCDS13 LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE
               70        80        90  

>>CCDS1047.1 S100A1 gene_id:6271|Hs108|chr1               (94 aa)
 initn: 351 init1: 351 opt: 351  Z-score: 432.4  bits: 84.7 E(32554): 9.1e-18
Smith-Waterman score: 351; 60.2% identity (88.6% similar) in 88 aa overlap (2-89:3-90)

                10        20        30        40        50         
pF1KB8  MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVME
         :::: :: .::.::: .::.::::.::.:.:::::...::: ::.  :. ..:::::.
CCDS10 MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK
               10        20        30        40        50        60

      60        70        80        90   
pF1KB8 TLDNDGDGECDFQEFMAFVAMVTTACHEFFEHE 
        ::..:::: ::::....:: .:.::..::    
CCDS10 ELDENGDGEVDFQEYVVLVAALTVACNNFFWENS
               70        80        90    

>>CCDS3391.1 S100P gene_id:6286|Hs108|chr4                (95 aa)
 initn: 315 init1: 315 opt: 315  Z-score: 390.0  bits: 76.8 E(32554): 2.1e-15
Smith-Waterman score: 315; 51.1% identity (81.1% similar) in 90 aa overlap (1-90:1-90)

               10        20        30        40        50        60
pF1KB8 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET
       :.::: ::  .:::: .::: ::. . : :.::: :...::  ::.  :....:::... 
CCDS33 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKD
               10        20        30        40        50        60

               70        80        90     
pF1KB8 LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE   
       :: .::.. ::.::..::: .:.:::..::     
CCDS33 LDANGDAQVDFSEFIVFVAAITSACHKYFEKAGLK
               70        80        90     

>>CCDS1042.1 S100A4 gene_id:6275|Hs108|chr1               (101 aa)
 initn: 289 init1: 289 opt: 289  Z-score: 359.0  bits: 71.2 E(32554): 1.1e-13
Smith-Waterman score: 289; 48.3% identity (80.5% similar) in 87 aa overlap (4-90:5-91)

                10        20        30        40        50         
pF1KB8  MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVME
           ::::. .....::.:::.:::: ::.:::::::.. ::  :: .  .. . .:.: 
CCDS10 MACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMS
               10        20        30        40        50        60

      60        70        80        90          
pF1KB8 TLDNDGDGECDFQEFMAFVAMVTTACHEFFEHE        
       .::.. :.: ::::. .:.. ..  :.::::          
CCDS10 NLDSNRDNEVDFQEYCVFLSCIAMMCNEFFEGFPDKQPRKK
               70        80        90       100 

>>CCDS1044.1 S100A2 gene_id:6273|Hs108|chr1               (97 aa)
 initn: 297 init1: 280 opt: 284  Z-score: 353.3  bits: 70.1 E(32554): 2.3e-13
Smith-Waterman score: 284; 44.9% identity (82.0% similar) in 89 aa overlap (2-90:3-91)

                10        20        30        40        50         
pF1KB8  MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVME
         : ::.:...:. .::.:: .:::: ::.:.:.:::...::  :. :  ..: . :.: 
CCDS10 MCSSLEQALAVLVTTFHKYSCQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMG
               10        20        30        40        50        60

      60        70        80        90      
pF1KB8 TLDNDGDGECDFQEFMAFVAMVTTACHEFFEHE    
       .::...: . ::::. .:.:..:. :..::.      
CCDS10 SLDENSDQQVDFQEYAVFLALITVMCNDFFQGCPDRP
               70        80        90       

>>CCDS43333.1 S100Z gene_id:170591|Hs108|chr5             (99 aa)
 initn: 300 init1: 273 opt: 277  Z-score: 344.9  bits: 68.6 E(32554): 6.8e-13
Smith-Waterman score: 277; 46.6% identity (80.7% similar) in 88 aa overlap (2-89:3-90)

                10        20        30        40        50         
pF1KB8  MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVME
         ..:: :: ..: .::.:::.:  . ::.:.::: :.. ::..::   :: ..:::...
CCDS43 MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLVDKIVQ
               10        20        30        40        50        60

      60        70        80        90        
pF1KB8 TLDNDGDGECDFQEFMAFVAMVTTACHEFFEHE      
        :: . :.: ::.::...:: .:.::...:         
CCDS43 DLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK
               70        80        90         

>>CCDS1041.2 S100A5 gene_id:6276|Hs108|chr1               (92 aa)
 initn: 243 init1: 148 opt: 251  Z-score: 314.8  bits: 62.9 E(32554): 3.3e-11
Smith-Waterman score: 251; 45.5% identity (80.7% similar) in 88 aa overlap (2-89:3-87)

                10        20        30        40        50         
pF1KB8  MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVME
         . ::::..... .::.::::::.:  :...::::::..::   : :.::. . : .:.
CCDS10 METPLEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELC--LGEMKESSI-DDLMK
               10        20        30        40          50        

      60        70        80        90    
pF1KB8 TLDNDGDGECDFQEFMAFVAMVTTACHEFFEHE  
       .::...: : ::.:. .:..:.  : ..::     
CCDS10 SLDKNSDQEIDFKEYSVFLTMLCMAYNDFFLEDNK
        60        70        80        90  

>>CCDS1037.1 S100A12 gene_id:6283|Hs108|chr1              (92 aa)
 initn: 250 init1: 235 opt: 246  Z-score: 308.9  bits: 61.8 E(32554): 6.9e-11
Smith-Waterman score: 246; 38.0% identity (78.3% similar) in 92 aa overlap (1-92:1-91)

               10        20        30        40        50        60
pF1KB8 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET
       :..::. . .....::::: :.:    :.:.:::.:...::.. ...::.. :.:.... 
CCDS10 MTKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQG
               10        20        30        40        50        60

               70        80        90   
pF1KB8 LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE 
       :: . : . :::::...::..  : : .  :. 
CCDS10 LDANQDEQVDFQEFISLVAIALKAAH-YHTHKE
               70        80         90  




92 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 16:08:14 2016 done: Fri Nov  4 16:08:15 2016
 Total Scan time:  1.410 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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