Result of FASTA (omim) for pF1KB8809
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8809, 360 aa
  1>>>pF1KB8809 360 - 360 aa - 360 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.3363+/-0.000509; mu= 22.1559+/- 0.032
 mean_var=123.2576+/-32.314, 0's: 0 Z-trim(109.0): 625  B-trim: 912 in 1/48
 Lambda= 0.115523
 statistics sampled from 16352 (17126) to 16352 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.536), E-opt: 0.2 (0.201), width:  16
 Scan time:  7.350

The best scores are:                                      opt bits E(85289)
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 2398 411.8 1.2e-114
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 2398 411.8 1.2e-114
NP_000570 (OMIM: 601373,609532,610379,612522) C-C  ( 352) 1206 213.2 7.3e-55
NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352) 1206 213.2 7.3e-55
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 1145 203.0 8.4e-52
NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360) 1134 201.2   3e-51
XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360) 1134 201.2   3e-51
NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374) 1099 195.4 1.8e-49
NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355) 1096 194.8 2.4e-49
XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 1069 190.3 5.5e-48
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 1069 190.3 5.5e-48
NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355) 1069 190.3 5.5e-48
NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355) 1069 190.3 5.5e-48
NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373) 1069 190.4 5.6e-48
NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376) 1069 190.4 5.6e-48
XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 1069 190.4 5.9e-48
XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 1069 190.4 5.9e-48
NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355)  946 169.8 8.1e-42
NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355)  946 169.8 8.1e-42
NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355)  946 169.8 8.1e-42
NP_001164645 (OMIM: 601470,607339,609423,613784) C ( 387)  946 169.9 8.5e-42
NP_001287 (OMIM: 602648) atypical chemokine recept ( 384)  888 160.2 6.9e-39
NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374)  880 158.9 1.7e-38
NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374)  880 158.9 1.7e-38
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372)  836 151.5 2.8e-36
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372)  836 151.5 2.8e-36
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372)  836 151.5 2.8e-36
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378)  836 151.6 2.8e-36
XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  811 147.4 4.9e-35
NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360)  811 147.4 4.9e-35
XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  811 147.4 4.9e-35
NP_001548 (OMIM: 146928) C-X-C chemokine receptor  ( 360)  811 147.4 4.9e-35
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  811 147.4 4.9e-35
XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  811 147.4 4.9e-35
NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352)  807 146.7 7.6e-35
NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356)  807 146.7 7.7e-35
NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350)  775 141.3 3.1e-33
NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369)  773 141.0   4e-33
XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369)  773 141.0   4e-33
NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357)  771 140.7 4.9e-33
NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357)  771 140.7 4.9e-33
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315)  762 139.1 1.3e-32
NP_001495 (OMIM: 300574) C-X-C chemokine receptor  ( 368)  734 134.5 3.6e-31
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378)  734 134.6 3.6e-31
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415)  734 134.6 3.8e-31
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415)  734 134.6 3.8e-31
NP_057641 (OMIM: 606065) atypical chemokine recept ( 350)  718 131.8 2.2e-30
NP_848540 (OMIM: 606065) atypical chemokine recept ( 350)  718 131.8 2.2e-30
NP_003956 (OMIM: 608379) C-C chemokine receptor-li ( 344)  696 128.2 2.8e-29
XP_011532510 (OMIM: 608379) PREDICTED: C-C chemoki ( 344)  696 128.2 2.8e-29


>>XP_016861176 (OMIM: 604836) PREDICTED: C-C chemokine r  (360 aa)
 initn: 2398 init1: 2398 opt: 2398  Z-score: 2179.5  bits: 411.8 E(85289): 1.2e-114
Smith-Waterman score: 2398; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)

               10        20        30        40        50        60
pF1KB8 MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNSVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNSVV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 VLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYLVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYLVG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 FYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCYT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 ERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKKNKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKKNKA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 VKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHCCLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHCCLN
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 PIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLHDAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLHDAL
              310       320       330       340       350       360

>>NP_005499 (OMIM: 604836) C-C chemokine receptor type 4  (360 aa)
 initn: 2398 init1: 2398 opt: 2398  Z-score: 2179.5  bits: 411.8 E(85289): 1.2e-114
Smith-Waterman score: 2398; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)

               10        20        30        40        50        60
pF1KB8 MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNSVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNSVV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 VLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYLVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYLVG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 FYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCYT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 ERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKKNKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKKNKA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 VKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHCCLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHCCLN
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 PIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLHDAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLHDAL
              310       320       330       340       350       360

>>NP_000570 (OMIM: 601373,609532,610379,612522) C-C chem  (352 aa)
 initn: 1149 init1: 701 opt: 1206  Z-score: 1105.9  bits: 213.2 E(85289): 7.3e-55
Smith-Waterman score: 1206; 49.4% identity (80.4% similar) in 352 aa overlap (8-356:2-348)

               10         20        30        40        50         
pF1KB8 MNPTDIADTTLDESIYS-NYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNSV
              :  ..  ::. :::  :    :: : ..: ..  .:::::::::.::..:: .
NP_000       MDYQVSSPIYDINYYTSE----PCQKINVKQIAARLLPPLYSLVFIFGFVGNML
                     10            20        30        40        50

      60        70        80        90       100       110         
pF1KB8 VVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYLV
       :.:.:.. :::.::::.::::::::::.:....:::..::: :: ::  .:.... .:..
NP_000 VILILINCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFI
               60        70        80        90       100       110

     120       130       140       150       160       170         
pF1KB8 GFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCY
       ::.:::::..:..::::::.:::::.:.:::.:.::.::. :: :::::::::..:.   
NP_000 GFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQ
              120       130       140       150       160       170

     180       190        200       210       220       230        
pF1KB8 TERNHTYCKTKYSLNSTT-WKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKK-
        :  :  :....  ..   :: ...:.: :::::.:: .:..::: :..:: .:.:::: 
NP_000 KEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKR
              180       190       200       210       220       230

       240       250       260       270       280       290       
pF1KB8 NKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHC
       ..::..::....... ::.::::::.:.:. :.  :..:.    :: :.:.::::...::
NP_000 HRAVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHC
              240       250       260       270       280       290

       300       310       320       330       340       350       
pF1KB8 CLNPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLH
       :.::::: :.:::::.:.: .:.  .    .:. :...:  . .  :: ::.:: .... 
NP_000 CINPIIYAFVGEKFRNYLLVFFQK-HIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEIS
              300       310        320       330       340         

       360
pF1KB8 DAL
          
NP_000 VGL
     350  

>>NP_001093638 (OMIM: 601373,609532,610379,612522) C-C c  (352 aa)
 initn: 1149 init1: 701 opt: 1206  Z-score: 1105.9  bits: 213.2 E(85289): 7.3e-55
Smith-Waterman score: 1206; 49.4% identity (80.4% similar) in 352 aa overlap (8-356:2-348)

               10         20        30        40        50         
pF1KB8 MNPTDIADTTLDESIYS-NYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNSV
              :  ..  ::. :::  :    :: : ..: ..  .:::::::::.::..:: .
NP_001       MDYQVSSPIYDINYYTSE----PCQKINVKQIAARLLPPLYSLVFIFGFVGNML
                     10            20        30        40        50

      60        70        80        90       100       110         
pF1KB8 VVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYLV
       :.:.:.. :::.::::.::::::::::.:....:::..::: :: ::  .:.... .:..
NP_001 VILILINCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFI
               60        70        80        90       100       110

     120       130       140       150       160       170         
pF1KB8 GFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCY
       ::.:::::..:..::::::.:::::.:.:::.:.::.::. :: :::::::::..:.   
NP_001 GFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQ
              120       130       140       150       160       170

     180       190        200       210       220       230        
pF1KB8 TERNHTYCKTKYSLNSTT-WKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKK-
        :  :  :....  ..   :: ...:.: :::::.:: .:..::: :..:: .:.:::: 
NP_001 KEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKR
              180       190       200       210       220       230

       240       250       260       270       280       290       
pF1KB8 NKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHC
       ..::..::....... ::.::::::.:.:. :.  :..:.    :: :.:.::::...::
NP_001 HRAVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHC
              240       250       260       270       280       290

       300       310       320       330       340       350       
pF1KB8 CLNPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLH
       :.::::: :.:::::.:.: .:.  .    .:. :...:  . .  :: ::.:: .... 
NP_001 CINPIIYAFVGEKFRNYLLVFFQK-HIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEIS
              300       310        320       330       340         

       360
pF1KB8 DAL
          
NP_001 VGL
     350  

>>NP_001286 (OMIM: 601159) C-C chemokine receptor type 1  (355 aa)
 initn: 1126 init1: 459 opt: 1145  Z-score: 1051.0  bits: 203.0 E(85289): 8.4e-52
Smith-Waterman score: 1145; 50.2% identity (79.8% similar) in 331 aa overlap (28-356:23-351)

               10        20        30        40        50        60
pF1KB8 MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNSVV
                                  :: : . .:::  .::::::::::.::.:: .:
NP_001      METPNTTEDYDTTTEFDYGDATPCQKVNERAFGAQLLPPLYSLVFVIGLVGNILV
                    10        20        30        40        50     

               70        80        90        100       110         
pF1KB8 VLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFW-GYYAADQWVFGLGLCKMISWMYLV
       :::: .::::..::..::::::::::::.:.::::  :   :.:::: ..::..: .: .
NP_001 VLVLVQYKRLKNMTSIYLLNLAISDLLFLFTLPFWIDYKLKDDWVFGDAMCKILSGFYYT
          60        70        80        90       100       110     

     120       130       140       150       160       170         
pF1KB8 GFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCY
       :.:: :::..:..::::::::::::.:::::.:.:::::.  :..:..::.::. ::   
NP_001 GLYSEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIIIWALAILASMPGLYFSKTQ
         120       130       140       150       160       170     

     180       190        200       210       220       230        
pF1KB8 TERNHTYCKTKYSLNSTT-WKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKKN
        : .:  :. ..  .:   ::....:..:..:::.:: .:..::. ::. : .  ::::.
NP_001 WEFTHHTCSLHFPHESLREWKLFQALKLNLFGLVLPLLVMIICYTGIIKILLRRPNEKKS
         180       190       200       210       220       230     

      240       250       260       270       280       290        
pF1KB8 KAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHCC
       :::..::.....:. ::::::..... .. ..   ..:   :.:: :.:.::..:..:::
NP_001 KAVRLIFVIMIIFFLFWTPYNLTILISVFQDFLFTHECEQSRHLDLAVQVTEVIAYTHCC
         240       250       260       270       280       290     

      300       310       320       330       340       350        
pF1KB8 LNPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLHD
       .::.:: :.::.::::. :::.  :    : ..  .:..   .  ::. . :: .:.:  
NP_001 VNPVIYAFVGERFRKYLRQLFHR-RVAVHLVKWLPFLSVDRLERVSST-SPSTGEHELSA
         300       310        320       330       340        350   

      360
pF1KB8 AL
         
NP_001 GF
         

>>NP_001116868 (OMIM: 601267) C-C chemokine receptor typ  (360 aa)
 initn: 1087 init1: 676 opt: 1134  Z-score: 1041.0  bits: 201.2 E(85289): 3e-51
Smith-Waterman score: 1134; 48.7% identity (78.6% similar) in 337 aa overlap (28-360:31-360)

                  10        20        30        40        50       
pF1KB8    MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGN
                                     :: :  .: .:  .:::::::::.::..::
NP_001 MLSTSRSRFIRNTNESGEEVTTFFDYDYGAPCHKFDVKQIGAQLLPPLYSLVFIFGFVGN
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KB8 SVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMY
        .:::.:.. :.:. .::.::::::::::::...::.:.. ::..:::: ..::... .:
NP_001 MLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGNAMCKLFTGLY
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KB8 LVGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFST
        .:...::::..:..::::::::::::.:.:::.:.::.::. :: ::::::.::..:. 
NP_001 HIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGIIFTK
              130       140       150       160       170       180

       180       190       200       210       220       230       
pF1KB8 CYTERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKK
       :  : .   :   .  .   :. . ..  ::::::.:: ::..::: :..:: .:.::::
NP_001 CQKEDSVYVCGPYFPRG---WNNFHTIMRNILGLVLPLLIMVICYSGILKTLLRCRNEKK
              190          200       210       220       230       

        240       250       260       270       280       290      
pF1KB8 -NKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVH
        ..::..::....... ::::::::..:.:. :.  :..:     :: : :.::::...:
NP_001 RHRAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTETLGMTH
       240       250       260       270       280       290       

        300       310       320          330       340       350   
pF1KB8 CCLNPIIYFFLGEKFRKYILQLFK---TCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMD
       ::.::::: :.:::::.:.  .:.   : :    .:. : ..   ..:  .:. : :: .
NP_001 CCINPIIYAFVGEKFRRYLSVFFRKHITKR----FCKQCPVFYRETVDGVTSTNTPSTGE
       300       310       320           330       340       350   

           360
pF1KB8 HDLHDAL
       ...  .:
NP_001 QEVSAGL
           360

>>XP_011532371 (OMIM: 601267) PREDICTED: C-C chemokine r  (360 aa)
 initn: 1087 init1: 676 opt: 1134  Z-score: 1041.0  bits: 201.2 E(85289): 3e-51
Smith-Waterman score: 1134; 48.7% identity (78.6% similar) in 337 aa overlap (28-360:31-360)

                  10        20        30        40        50       
pF1KB8    MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGN
                                     :: :  .: .:  .:::::::::.::..::
XP_011 MLSTSRSRFIRNTNESGEEVTTFFDYDYGAPCHKFDVKQIGAQLLPPLYSLVFIFGFVGN
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KB8 SVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMY
        .:::.:.. :.:. .::.::::::::::::...::.:.. ::..:::: ..::... .:
XP_011 MLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGNAMCKLFTGLY
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KB8 LVGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFST
        .:...::::..:..::::::::::::.:.:::.:.::.::. :: ::::::.::..:. 
XP_011 HIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGIIFTK
              130       140       150       160       170       180

       180       190       200       210       220       230       
pF1KB8 CYTERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKK
       :  : .   :   .  .   :. . ..  ::::::.:: ::..::: :..:: .:.::::
XP_011 CQKEDSVYVCGPYFPRG---WNNFHTIMRNILGLVLPLLIMVICYSGILKTLLRCRNEKK
              190          200       210       220       230       

        240       250       260       270       280       290      
pF1KB8 -NKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVH
        ..::..::....... ::::::::..:.:. :.  :..:     :: : :.::::...:
XP_011 RHRAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTETLGMTH
       240       250       260       270       280       290       

        300       310       320          330       340       350   
pF1KB8 CCLNPIIYFFLGEKFRKYILQLFK---TCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMD
       ::.::::: :.:::::.:.  .:.   : :    .:. : ..   ..:  .:. : :: .
XP_011 CCINPIIYAFVGEKFRRYLSVFFRKHITKR----FCKQCPVFYRETVDGVTSTNTPSTGE
       300       310       320           330       340       350   

           360
pF1KB8 HDLHDAL
       ...  .:
XP_011 QEVSAGL
           360

>>NP_001116513 (OMIM: 601267) C-C chemokine receptor typ  (374 aa)
 initn: 959 init1: 676 opt: 1099  Z-score: 1009.3  bits: 195.4 E(85289): 1.8e-49
Smith-Waterman score: 1099; 50.8% identity (80.1% similar) in 307 aa overlap (28-333:31-333)

                  10        20        30        40        50       
pF1KB8    MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGN
                                     :: :  .: .:  .:::::::::.::..::
NP_001 MLSTSRSRFIRNTNESGEEVTTFFDYDYGAPCHKFDVKQIGAQLLPPLYSLVFIFGFVGN
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KB8 SVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMY
        .:::.:.. :.:. .::.::::::::::::...::.:.. ::..:::: ..::... .:
NP_001 MLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGNAMCKLFTGLY
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KB8 LVGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFST
        .:...::::..:..::::::::::::.:.:::.:.::.::. :: ::::::.::..:. 
NP_001 HIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGIIFTK
              130       140       150       160       170       180

       180       190       200       210       220       230       
pF1KB8 CYTERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKK
       :  : .   :   .  .   :. . ..  ::::::.:: ::..::: :..:: .:.::::
NP_001 CQKEDSVYVCGPYFPRG---WNNFHTIMRNILGLVLPLLIMVICYSGILKTLLRCRNEKK
              190          200       210       220       230       

        240       250       260       270       280       290      
pF1KB8 -NKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVH
        ..::..::....... ::::::::..:.:. :.  :..:     :: : :.::::...:
NP_001 RHRAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTETLGMTH
       240       250       260       270       280       290       

        300       310       320       330       340       350      
pF1KB8 CCLNPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDL
       ::.::::: :.:::::. ....   ::   .    ::                       
NP_001 CCINPIIYAFVGEKFRS-LFHIALGCRIAPLQKPVCGGPGVRPGKNVKVTTQGLLDGRGK
       300       310        320       330       340       350      

        360              
pF1KB8 HDAL              
                         
NP_001 GKSIGRAPEASLQDKEGA
        360       370    

>>NP_005192 (OMIM: 601834) C-C chemokine receptor type 8  (355 aa)
 initn: 1088 init1: 1061 opt: 1096  Z-score: 1006.8  bits: 194.8 E(85289): 2.4e-49
Smith-Waterman score: 1096; 45.5% identity (75.8% similar) in 347 aa overlap (8-351:2-345)

               10          20        30        40        50        
pF1KB8 MNPTDIADTTLDESI--YSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNS
              : ::: :.   ..::  . . .::  : :.. :.:.:  .: :.:::.:::::
NP_005       MDYTLDLSVTTVTDYYYPDIFSSPCDAELIQTNGKLLLAVFYCLLFVFSLLGNS
                     10        20        30        40        50    

       60        70        80        90       100       110        
pF1KB8 VVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYL
       .:.:::   :.:::.:::::::::.::::::::.::  ::  ::::::  .::..: .: 
NP_005 LVILVLVVCKKLRSITDVYLLNLALSDLLFVFSFPFQTYYLLDQWVFGTVMCKVVSGFYY
           60        70        80        90       100       110    

      120       130       140       150       160       170        
pF1KB8 VGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTC
       .::::..::. :::.:::::.::::..:..::. .:.   ::.: .:..:..: ..:   
NP_005 IGFYSSMFFITLMSVDRYLAVVHAVYALKVRTIRMGTTLCLAVWLTAIMATIPLLVFYQV
          120       130       140       150       160       170    

      180       190       200       210       220       230        
pF1KB8 YTERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKKN
        .: .   : . :. ..  ::.......:::::.::. :..:::  :.. :..:.:..:.
NP_005 ASEDGVLQCYSFYNQQTLKWKIFTNFKMNILGLLIPFTIFMFCYIKILHQLKRCQNHNKT
          180       190       200       210       220       230    

      240       250       260       270       280       290        
pF1KB8 KAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHCC
       ::..... ::.  : ::.:.:.:::: .:  ...:. :.. . : :: ..:: ..:.:::
NP_005 KAIRLVLIVVIASLLFWVPFNVVLFLTSLHSMHILDGCSISQQLTYATHVTEIISFTHCC
          240       250       260       270       280       290    

      300       310        320       330       340       350       
pF1KB8 LNPIIYFFLGEKFRKYILQLF-KTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLH
       .::.:: :.::::.:.. ..: :.:  .:   .: :  .   .   :::  : .      
NP_005 VNPVIYAFVGEKFKKHLSEIFQKSCSQIF---NYLGRQMPRESCEKSSSCQQHSSRSSSV
          300       310       320          330       340       350 

       360 
pF1KB8 DAL 
           
NP_005 DYIL
           

>>XP_006713023 (OMIM: 601268) PREDICTED: C-C chemokine r  (355 aa)
 initn: 728 init1: 384 opt: 1069  Z-score: 982.5  bits: 190.3 E(85289): 5.5e-48
Smith-Waterman score: 1069; 46.2% identity (77.1% similar) in 353 aa overlap (9-356:3-351)

               10          20        30        40        50        
pF1KB8 MNPTDIADTTLD--ESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNS
               :.::  :.. .. : :...   : :   .:.   :.::::::::. ::::: 
XP_006       MTTSLDTVETFGTTSY-YDDVGLLCEKADTRALMAQFVPPLYSLVFTVGLLGNV
                     10         20        30        40        50   

       60        70        80        90        100       110       
pF1KB8 VVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYA-ADQWVFGLGLCKMISWMY
       :::..:.::.::: ::..::::::::::::. .:::: .:. . .:::: :.::..: .:
XP_006 VVVMILIKYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKLLSGFY
            60        70        80        90       100       110   

       120       130       140       150       160       170       
pF1KB8 LVGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFST
        .:.:: :::..:..::::::::::::.:::::.:.:::::..::..::.:.:: :.:  
XP_006 HTGLYSEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYE
           120       130       140       150       160       170   

       180       190        200       210       220       230      
pF1KB8 CYTERNHTYCKTKYSLNST-TWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEK
            ..: :.. :  ... .:. . .:...:. ::.:: .: .::. ::.:: .: ..:
XP_006 TEELFEETLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPSKK
           180       190       200       210       220       230   

        240       250       260       270       280       290      
pF1KB8 KNKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVH
       : ::...::.....:. ::::::....: .   .   .::   ..:: .. .::..:. :
XP_006 KYKAIRLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSH
           240       250       260       270       280       290   

        300       310       320        330       340       350     
pF1KB8 CCLNPIIYFFLGEKFRKYILQLFKTCRGLFV-LCQYCGLLQIYSADTPSSSYTQSTMDHD
       ::.::.:: :.::.::::. ..:.  : :.. : .:  .:   . .  .:: . :: . .
XP_006 CCMNPVIYAFVGERFRKYLRHFFH--RHLLMHLGRYIPFLPSEKLER-TSSVSPSTAEPE
           300       310         320       330        340       350

         360
pF1KB8 LHDAL
       :    
XP_006 LSIVF
            




360 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 15:46:50 2016 done: Fri Nov  4 15:46:52 2016
 Total Scan time:  7.350 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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