GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:42:19

Sequence gi568815575f:41627027_41828034 : 201008 bp : 39.00% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    382    377    6                               1.05
 1.01 Sngl -  17185  16256  930  1  0   43   39   412 0.855  27.98
 1.00 Prom -  20417  20378   40                              -7.75

 2.00 Prom +  20575  20614   40                              -3.05
 2.01 Init +  28415  28779  365  1  2   39  116   314 0.585  25.87
 2.02 Term +  29836  29890   55  1  1   97   41    34 0.598  -4.35
 2.03 PlyA +  30150  30155    6                               1.05

 3.04 PlyA -  33093  33088    6                               1.05
 3.03 Term -  33535  33359  177  1  0  110   48   140 0.867   8.90
 3.02 Intr -  38426  38251  176  0  2   36   90   114 0.962   5.14
 3.01 Init -  40095  39972  124  0  1   77   82    77 0.985   6.38
 3.00 Prom -  46183  46144   40                              -6.15

 4.02 PlyA -  46849  46844    6                               1.05
 4.01 Sngl -  49468  48731  738  1  0   82   41   695 0.879  60.16
 4.00 Prom -  65239  65200   40                              -5.75

 5.00 Prom +  65303  65342   40                              -6.15
 5.01 Sngl +  68629  69753 1125  0  0   75   51   141 0.527   5.50
 5.02 PlyA +  70226  70231    6                               1.05

 6.00 Prom +  72568  72607   40                              -4.15
 6.01 Init +  80272  80335   64  0  1   65   94    43 0.132   3.99
 6.02 Intr +  84852  84962  111  1  0   54   87    41 0.010   0.03
 6.03 Intr +  87913  88075  163  2  1   83  116   138 0.069  14.21
 6.04 Intr +  92271  92307   37  0  1   60   67    54 0.757  -2.15
 6.05 Term +  92564  92812  249  1  0   74   49   245 0.926  13.92
 6.06 PlyA +  92968  92973    6                               1.05

 7.08 PlyA -  93003  92998    6                               1.05
 7.07 Term -  95344  95195  150  1  0   38   47   134 0.008   1.23
 7.06 Intr - 112430 112358   73  1  1   82  115    54 0.881   5.99
 7.05 Intr - 118575 118498   78  2  0   69   91   108 0.169   6.95
 7.04 Intr - 121712 121602  111  1  0  118   78     9 0.038   1.48
 7.03 Intr - 160257 160152  106  1  1   96   68    75 0.493   4.65
 7.02 Intr - 162405 162304  102  1  0  103   81     9 0.512   0.93
 7.01 Init - 167913 167907    7  0  1   77   79     0 0.591  -0.99
 7.00 Prom - 169454 169415   40                              -2.95

 8.00 Prom + 172928 172967   40                              -4.25
 8.01 Init + 182876 183312  437  1  2   58   77   386 0.341  30.18
 8.02 Intr + 184376 184660  285  2  0   -4   63   165 0.140   0.33
 8.03 Term + 185241 186318 1078  0  1    3   37   448 0.289  21.79
 8.04 PlyA + 186481 186486    6                               1.05

 9.02 PlyA - 187278 187273    6                               1.05
 9.01 Term - 197490 197294  197  1  2   44   33   158 0.202   2.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:41627027_41828034|GENSCAN_predicted_peptide_1|309_aa
MNINAKILNKILVNRIQQHIKKLIHHDQVSFIPGMQGWFNICKSINIIHHINRTNNKNHM
ITSIDAEKAFDKIQQRFMLKTLNKLGIDGTYLKIVRAIYDKPTANIILNGQKLEAFPLKT
GTRQECPLSPLLFNIVLEVLARAIRQEKEIKGIRLGKEEVKLSLFADDMIVYLENPIISA
QNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQIESQIMSELPFTIASKRIKYLGIQLTK
DVKDLFKESYKPLLNEINEDTNKWKNIPCLWIGRINIMKMAILPKVIYRFNAIPIKLPMT
FFTELEKLL

>gi568815575f:41627027_41828034|GENSCAN_predicted_CDS_1|930_bp
atgaacatcaatgcaaaaatcctcaataaaatactggtaaaccgaatacagcagcacatc
aaaaagcttatccaccacgatcaagtcagcttcatccctgggatgcaaggctggttcaac
atatgcaaatcaataaacataatccatcatataaacagaaccaacaacaaaaaccacatg
attacctcaatagatgcagaaaaggcctttgacaaaattcaacagcgcttcatgctaaaa
actctcaataaactaggtattgatggaacttatctcaaaatagtaagagctatttatgac
aaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaact
ggcacaagacaggaatgccctctctcaccactcctattcaacatagtgttggaagttctg
gccagggcaatcaggcaagagaaagaaataaaaggtattcgattaggaaaagaggaagtc
aaattgtccctgtttgcagatgacatgattgtatatttagaaaaccccatcatctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcctatacaccaataacagacaaatagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaaag
gatgtgaaggacctcttcaaggagagctacaaaccactgctcaatgaaataaatgaggac
acaaacaaatggaagaatattccatgcttatggataggaagaatcaatatcatgaaaatg
gccatactgcccaaagtaatttatagattcaatgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaactactttaa

>gi568815575f:41627027_41828034|GENSCAN_predicted_peptide_2|139_aa
MTEGHKMILTPEIPMLSHMMSEKHSNGDGSAQNSSIIKWKWFMQEHPLREVQGGNILKQG
ASFPLGLTLELCEELWDSTDTWTGPREQLSTDQRRAAWCVDDSSKVNRQHPVWKDATLDQ
RSGSRTRAITTSVRTRDDS

>gi568815575f:41627027_41828034|GENSCAN_predicted_CDS_2|420_bp
atgactgaaggacataaaatgatcttgacacctgaaatacccatgctttctcacatgatg
tcagagaaacattcaaatggggatggcagcgcccagaatagttccataataaaatggaaa
tggtttatgcaggaacatcctctccgggaagtgcaaggaggaaacatcctcaagcaggga
gcctcttttcccctaggactgactctggaactgtgtgaggaactgtgggattctactgac
acttggacagggccccgtgaacagctctcaactgaccaacgaagagctgcttggtgtgtg
gatgacagttccaaggtgaatcgacagcatcctgtttggaaggatgccactcttgatcaa
agaagtggttctaggaccagagccataactaccagtgttagaaccagggatgattcctaa

>gi568815575f:41627027_41828034|GENSCAN_predicted_peptide_3|158_aa
MAGTGHGRSDYSQVKAPILSGLAQEVVGVKLSFKASSKLSAGRVGTPHFMAPEVVKREPY
GKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRM
LMLDPAERITVYEALNHPWLKVHEHSQVTFYTLSEHFQ

>gi568815575f:41627027_41828034|GENSCAN_predicted_CDS_3|477_bp
atggctgggactggccatggtcgctctgattattcccaagttaaggcccccattttgagt
ggcttggcccaggaagtggtaggagtcaagttgagtttcaaagcatcatccaaactgtca
gcaggacgtgttggaacacctcattttatggcaccagaagtggtcaaaagagagccttac
ggaaagcctgtagacgtctgggggtgcggtgtgatcctttttatcctgctcagtggttgt
ttgcctttttacggaaccaaggaaagattgtttgaaggcattattaaaggaaaatataag
atgaatccaaggcagtggagccatatctctgaaagtgccaaagacctagtacgtcgcatg
ctgatgctggatccagctgaaaggatcactgtttatgaagcactgaatcacccatggctt
aaggtacatgagcattcacaggtcaccttctacactttgtctgaacacttccagtga

>gi568815575f:41627027_41828034|GENSCAN_predicted_peptide_4|245_aa
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVLGARRSSWR
VVSSIEQKTEGAEKKQQMAREYREKVDTELRDICNDVLFLLEKFLIPSASQAESKVFSLK
MKGDYYHYLAEVATGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRPGLALNFSVFYYE
ILNSPEKACSLAKTAFDEAIAELDTLIEESYKDSMLIMQLLRDNLTLWTSDTQGDEAEAG
EGGEN

>gi568815575f:41627027_41828034|GENSCAN_predicted_CDS_4|738_bp
atggataaaaatgagctggttcagaaggccaaactggccgagcaggctgagcgatatgat
gacatggcagcctgcatgaagtctgtaactgagcaaggagctgaattatccaatgaggag
aggaatcttctctcagttgcttataaaaatgttttaggagcccgtaggtcatcttggagg
gtcgtctcaagtattgaacaaaagacggaaggtgctgagaaaaaacagcagatggctcga
gaatacagagagaaagttgatacggagctaagagatatctgcaatgatgtactgtttctt
ttggaaaagttcttgatccccagtgcttcacaagcagagagcaaagtcttctctttgaaa
atgaaaggagattactaccattacttggcagaggttgccactggtgatgacaagaaaggg
attgtggatcagtcacaacaagcataccaagaagcttttgaaatcagcaaaaaggaaatg
caaccaacacatcctatcagaccaggtctggcccttaacttctctgtgttctattatgag
attctgaactccccagagaaagcctgctctcttgcaaagacagcttttgatgaagccatt
gctgaacttgatacattaattgaagagtcatacaaagacagcatgctaataatgcaatta
ctgagagacaacttgacattgtggacatcagatacccaaggagacgaagctgaagcagga
gaaggaggggaaaattaa

>gi568815575f:41627027_41828034|GENSCAN_predicted_peptide_5|374_aa
MTTTSVSSWPYSSHRMRFITNHSDQPPQNFSATPNVTTCPMDEKLLSTVLTTSYSVIFIV
GLVGNIIALYVFLGIHRKRNSIQIYLLNVAIADLLLIFCLPFRIMYHINQNKWTLGVILC
KVVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRKAITTKQSIYVCCIVWMLALGGFL
TMIILTLKKGGHNSTMCFHYRDKHNAKGEAIFNFILVVMFWLIFLLIILSYIKIGKNLLR
ISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQLNVSSCYWKEIVHK
TNEIMLVLSSFNSCLDPVMYFLMSSNIRKIMCQLLFRRFQGEPSRSESTSEFKPGYSLHD
TSVAVKIQSSSKST

>gi568815575f:41627027_41828034|GENSCAN_predicted_CDS_5|1125_bp
atgacgacaacttcagtcagcagctggccttactcctcccacagaatgcgctttataacc
aatcatagcgaccaaccgccacaaaacttctcagcaacaccaaatgttactacctgtccc
atggatgaaaaattgctatctactgtgttaaccacatcctactctgttattttcatcgtg
ggactggttgggaacataatcgccctctatgtatttctgggtattcaccgtaaaagaaat
tccattcaaatttatctacttaacgtagccattgcagacctcctactcatcttctgcctc
cctttccgaataatgtatcatattaaccaaaacaagtggacactaggtgtgattctgtgc
aaggttgtgggaacactgttttatatgaacatgtacattagcattattttgcttggattc
atcagtttggatcgctatataaaaattaatcggtctatacagcaacggaaggcaataaca
accaaacaaagtatttatgtctgttgtatagtatggatgcttgctcttggtggattccta
actatgattattttaacacttaagaaaggagggcataattccacaatgtgtttccattac
agagataagcataacgcaaaaggagaagccatttttaacttcattcttgtggtaatgttc
tggctaattttcttactaataatcctttcatatattaagattgggaagaatctattgagg
atttctaaaaggaggtcaaaatttcctaattctggtaaatatgccactacagctcgtaac
tcctttattgtacttatcatttttactatatgttttgttccctatcatgcctttcgattc
atctacatttcttcacagctaaatgtatcatcttgctactggaaagaaattgttcacaaa
accaatgagatcatgctggttctctcatctttcaatagttgcttagatccagtcatgtat
ttcctgatgtccagtaacattcgcaaaataatgtgccaacttctttttagacgatttcaa
ggtgaaccaagtaggagtgaaagcacttcagaatttaaaccaggatactccctgcatgat
acatctgtggcagtgaaaatacagtctagttctaaaagtacttga

>gi568815575f:41627027_41828034|GENSCAN_predicted_peptide_6|207_aa
MKDHMERGAQPAQLFQVMLQTPVLLLNKILPYPSSPFKLSAYPHSSWIRTGAWELLNAGL
TLELCEELRDSTETWTGPRKQLSTDQQRVAWCVNDSSKVNNLVWKDATLDQRSLEQQLCC
NRLLKKGYTRQQFCHKSTLNKGDRVIYKLTCPPYCCVRFPLAGTGPRILYLSRLASNLEL
LKKGKGRGEQKKEEVTCGMLRKVKTCK

>gi568815575f:41627027_41828034|GENSCAN_predicted_CDS_6|624_bp
atgaaagatcacatggagagaggggcacagcctgctcaactcttccaggtgatgctccag
acacctgttctgctgctcaataaaattcttccctacccatcctcacccttcaaattgtca
gcgtatcctcattcttcgtggataaggacaggagcttgggaactgctgaacgcaggactg
actctggaactgtgtgaggaactgcgggattctactgagacttggacagggccccgtaaa
cagctctcaactgaccaacaaagagttgcttggtgtgtaaatgacagttccaaggtgaac
aatcttgtttggaaggatgccactcttgatcaaagaagtttggagcagcagctgtgctgc
aatcggttactgaagaaagggtacactcgccagcagttttgccacaagagtacactgaac
aaaggagacagggtcatttataagctgacgtgtccaccctactgctgtgtccggtttcca
ttggctggaacgggacctcgcattctgtatctgtcccgattggctagcaacttagaactt
cttaaaaaaggcaaaggcagaggagaacaaaagaaggaggaagtaacttgtggaatgctg
agaaaagtaaaaacctgcaaataa

>gi568815575f:41627027_41828034|GENSCAN_predicted_peptide_7|208_aa
MGVNTEPPALPCWAPNIQLLIRILTLPSPTDLVDSADLKREASICHMLKHPHIVELLETY
SSDGMLYMVFELLRLFPHPFWVPPESPLALRTSPKFFLETPESIEAFYFMDGADLCFEIV
KRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPLKSTVSLLQYSIGHTEPALH
QCGTGKYQEVMITGSHLGNWLSQMSINR

>gi568815575f:41627027_41828034|GENSCAN_predicted_CDS_7|627_bp
atgggtgtaaacactgagcccccagccctgccatgctgggctccaaacatccagcttctc
attagaatcttaacactgccctctccaactgatttggtagactctgcagatctaaagcgg
gaagccagtatctgtcatatgctgaaacatccacacattgtagagttattggagacatat
agctcagatggaatgctttacatggttttcgaattgctccgtcttttccctcatcccttc
tgggtccctccagaaagtcctctagctctcagaacatctcccaaattctttttggaaaca
ccagagtccattgaggcattttattttatggatggagcagatctgtgttttgaaatcgta
aagcgagctgacgctggttttgtgtacagtgaagctgtagccagccattatatgagacag
atactggaagctctacgctactgccatgataataacataattcacagggatgtgaagcct
ctgaagtcaacagtgtcacttctgcagtattctattggtcacacagagccagccctgcat
cagtgtgggacgggtaaatatcaggaggtgatgatcactgggagccatcttggaaactgg
ctatcacagatgtcaatcaaccgttga

>gi568815575f:41627027_41828034|GENSCAN_predicted_peptide_8|599_aa
MELKIMARELRDKCTSFSSRFDQLEERVSVTEDQMNEMKREEKFREKRVKRNEQSLQEIW
DYVKRPNLRLIGVPESDGESGTKLENTLQDIIQENFPNLARQANIQIQEIQRPPQRYSSR
RATPRYITVRFTKVEGKNAKGSQRESAIKLEFRIKKLTQNRSTTRKLNNLLLNDYWVHNE
MKAEIKMFFETNENKDTTYQNLWDTFKVVCRGKFIALNAHKRKQERSKIDTLISQLKELE
KLAEAQQKKGNSRPISLMNIDAKILNKMLANRIQQHIKKLIHHDQVGFIPGMQGWFNISK
SINVIHHINRTKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYLKIIRAIYDKPT
ANIILNGQKLEAFPVKTGTRQGCPLSPHLFNIVLEVLARVIRQEKEIKGNQLGKEEVKLS
LFADDMIVCLENPTVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELP
FTITSKRIKYLGIQLTKDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWIGRINIVKMAIL
PKVIYRFNGIPIKLPMTFFTKLEKTTLKFIWNQKRARIAKSNLSKKNKAGGITLPDFKL

>gi568815575f:41627027_41828034|GENSCAN_predicted_CDS_8|1800_bp
atggagctgaaaatcatggcacgagaactacgtgacaaatgcacaagcttcagtagccga
tttgatcaactggaagaaagggtatcagtgactgaagatcaaatgaatgaaatgaagcga
gaagagaagtttagagaaaaaagagtaaaaagaaacgaacaaagccttcaagaaatatgg
gactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgatggggagagt
ggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaacctagca
aggcaggccaacattcaaattcaggaaatacagagaccaccacaaagatactcctcgcga
agagcaactccaagatacataactgtcagattcaccaaagttgaaggaaaaaatgctaag
ggcagccagagagaaagtgcaatcaaactagaattcaggattaagaaactcactcaaaac
cgctcaactacacggaaactgaacaacctgctcctgaatgactactgggtacataacgaa
atgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccag
aatctctgggacacatttaaagtagtgtgtagagggaaatttatagcactaaatgcccac
aagagaaagcaggagagatctaaaattgacaccctaatatcacaattaaaagaactagag
aagctggcagaggcacaacaaaaaaaagggaattctagaccaatatccctgatgaacatc
gatgcaaaaatcctcaataaaatgctggcaaaccgaatccagcagcacatcaaaaagctt
atccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaacatatccaaa
tcaataaatgtaatccatcatataaacagaaccaaagacaaaaaccacatgattatctca
atagatgcagaaaaggcctttgacaaaattcaacagcccttcatgctaaaaactctcaat
aaattaggtattgatgggacgtatctcaaaataataagagctatctatgacaaacccaca
gccaatatcatactgaatgggcaaaaactggaagcattccctgtgaaaactggcacaaga
cagggatgccctctctcaccacacctattcaacatagtgttggaagttctggccagggta
atcaggcaggagaaagaaataaagggtaaccaattaggaaaagaggaagtcaaattgtcc
ctgtttgcagatgacatgattgtatgtttagaaaaccccactgtctcagcccaaaatctc
cttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatca
caagcattcttatacaccaataacagacaaacagagagccaaatcatgagtgaactccca
ttcacaattacttcaaagagaataaaatacctaggaatccaacttacaaaggatgtgaag
gacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggacacaaacaaa
tggaagaacattccatgctcatggataggaagaatcaatatcgtgaaaatggccatactg
cccaaggtaatttatagattcaatggcatccccatcaagctaccaatgactttcttcacg
aaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgtattgccaag
tcaaacctaagcaaaaagaacaaagctggaggcatcacactacctgacttcaagctataa

>gi568815575f:41627027_41828034|GENSCAN_predicted_peptide_9|65_aa
XKLHTLQEPDEKNTGTGTTEPFLLQCPSSALSGQSLMLCQLEKYSQSISSSAEQAMKCGF
GADRQ

>gi568815575f:41627027_41828034|GENSCAN_predicted_CDS_9|198_bp
nataaactgcacacactgcaggagcctgatgagaaaaacactggaactgggacaacagaa
ccctttctcctccagtgcccctccagtgcccttagtggacaaagcttaatgttgtgccag
ttggaaaaatattcacagtcaatctccagtagtgcagagcaggcaatgaagtgtggattt
ggagctgacagacaatag