GENSCAN 1.0	Date run:  4-Nov-116	Time: 13:41:56

Sequence gi568815597r:200544257_200766740 : 222484 bp : 39.93% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +    512    775  264  1  0   69   55   139 0.511   3.65
 1.02 PlyA +   1009   1014    6                               1.05

 2.34 PlyA -   1510   1505    6                               1.05
 2.33 Term -   9511   9132  380  2  2   96   42   304 0.975  20.57
 2.32 Intr -  10350  10212  139  0  1   57   86   101 0.997   5.92
 2.31 Intr -  15196  15074  123  1  0   82   94    73 0.992   7.16
 2.30 Intr -  16624  16466  159  1  0  106   91   102 0.999  11.56
 2.29 Intr -  20997  20813  185  1  2   83   99    67 0.993   5.89
 2.28 Intr -  21413  21189  225  0  0   39   67   116 0.282   1.63
 2.27 Intr -  25749  25655   95  2  2   93   68   -10 0.397  -3.81
 2.26 Intr -  31435  31335  101  1  2   45   88   129 0.660   6.59
 2.25 Intr -  36127  35998  130  0  1  111   20    91 0.899   4.38
 2.24 Intr -  37038  36945   94  1  1   45  109   102 0.971   6.10
 2.23 Intr -  41971  41845  127  1  1  -12  111   124 0.988   4.03
 2.22 Intr -  45113  44961  153  2  0   49   91    96 0.976   5.35
 2.21 Intr -  46016  45869  148  1  1   61   58   175 0.999  11.12
 2.20 Intr -  47984  47824  161  2  2   78   98   120 0.999   9.86
 2.19 Intr -  49513  49411  103  0  1   93  103    38 0.995   5.06
 2.18 Intr -  54165  53981  185  0  2   69   76   136 0.921   8.16
 2.17 Intr -  55857  55794   64  2  1   52   67    58 0.920  -2.10
 2.16 Intr -  56247  56100  148  1  1   78   75   213 0.995  17.37
 2.15 Intr -  57812  57640  173  1  2   70   53   193 0.588  12.66
 2.14 Intr -  62542  62490   53  1  2  113  101    47 0.968   5.29
 2.13 Intr -  64672  64574   99  1  0   97   63    69 0.958   4.69
 2.12 Intr -  70149  70062   88  2  1   71   87    34 0.948   0.65
 2.11 Intr -  71353  71099  255  0  0   73  102   185 0.994  14.04
 2.10 Intr -  74396  73356 1041  1  0   67   87   772 0.018  63.65
 2.09 Intr -  76600  76155  446  1  2  -81   76   368 0.007   9.97
 2.08 Intr -  80791  80681  111  1  0   66   43    88 0.001   1.76
 2.07 Intr - 104311 104183  129  1  0   55  110   102 0.994   9.07
 2.06 Intr - 104970 104818  153  0  0   95   42    62 0.755   1.65
 2.05 Intr - 106329 106169  161  1  2   73   82    90 0.307   5.69
 2.04 Intr - 109869 109830   40  0  1   73   94    23 0.372  -1.72
 2.03 Intr - 114860 114771   90  2  0  107  100    39 0.851   6.27
 2.02 Intr - 119830 119663  168  1  0   92  121   107 0.999  13.62
 2.01 Init - 122484 121681  804  0  0   33  107   701 0.959  61.25
 2.00 Prom - 133048 133009   40                              -4.35

 3.00 Prom + 139378 139417   40                              -4.95
 3.01 Init + 166367 166424   58  1  1   78   68    92 0.320   7.72
 3.02 Intr + 193713 193897  185  1  2   33   65   175 0.133   8.29
 3.03 Intr + 194664 194931  268  2  1   59   50   169 0.012   6.38
 3.04 Intr + 195624 195710   87  1  0   32   92    99 0.017   3.72
 3.05 Intr + 197843 197974  132  0  0   85   64    36 0.319   0.60
 3.06 Intr + 209523 209663  141  1  0  104   65    51 0.236   3.80
 3.07 Intr + 216583 216842  260  2  2   22  101   261 0.924  17.06

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  74467  73356 1112  1  2   71   87   777 0.968  69.74
S.002 Sngl +  76140  76493  354  2  0   68   42   246 0.834  13.80
S.003 Init + 195572 195710  139  1  1   78   92   169 0.901  16.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:200544257_200766740|GENSCAN_predicted_peptide_1|87_aa
MTLELKPIGSEMEPRGFLEEERSPQRQQQVCCLISFQQELILEERDIEHGLWPRNSGSEI
LYCKAKRPHFPHLRNGDHNGTHLLGLL

>gi568815597r:200544257_200766740|GENSCAN_predicted_CDS_1|264_bp
atgacacttgagttaaaacctataggaagtgagatggagccacggggattcctggaggaa
gagcgttccccgcagaggcagcagcaagtgtgctgcttaattagcttccaacaggaactt
attttagaagaaagggatatagagcatggactttggcccaggaattctggttctgagatt
ctgtactgcaaagccaagaggcctcattttcctcatctgcgaaatggggatcataatggc
actcaccttctggggttattgtga

>gi568815597r:200544257_200766740|GENSCAN_predicted_peptide_2|2176_aa
MFVPRSLKIKRNANDDGKSCVAKIIKPDPEDLQLDKSRDVPVDAVATEAATIDRHISESC
PFPSPGGQLAEVHSVSPEQGAKDSHPSEEPVKSFSKTQRWAEPGEPICVVCGRYGEYICD
KTDEDVCSLECKAKHLLQVKEKEEKSKLSNPQKADSEPESPLNASYVYKEHPFILNLQED
QIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLG
RDILASADTGSGKTAAFLLPVIMRALFESKTPSALILTPTRELAIQIERQAKELMSGLPR
MKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEVILIFR
EVWATLTTTIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEIL
NDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYE
VVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQENTYKSTWRNPQHFQQDVRMTLGYV
GKAQWEEDNQLKRRLPEPNHRHFRGAGGSKGAAPDATPSSQSEGGAPIQIAAFWGAGAGG
GEWRGDCVEGVPKVPDPAEGRSFGTGEGVRTLSLQATTALRAGGLSSSPPFSSSAFQVGG
EGVPERRAQGSVSAGTGKPDFRASRPVGFSPSLPESVGIKSSSLNALTHSSRLKLHLKSD
MSECENDDPLLRSAGKVRDINRTYVISASRKTADMPLTPNPVGRLALQRRTTRNKESSLL
VSELEDTTEKTAETRLTLQRRAKTDSAEKWKTAEIDSVKMTLNVGGETENNGVSKESRTN
VRIVNNAKNSFVASSVPLDEDPQVIEMMADKKYKETFSAPSRANENVALKYSSNRPPIAS
LSQTEVVRSGHLTTKPTQSKLDIKVLGTGNLYHRSIGKEIAKTSNKFGSLEKRTPTKCTT
EHKLTTKCSLPQLKSPAPSILKNRMSNLQVKQRPKSSFLANKQERSAENTILPEEETVVQ
NTSAGKDPLKVENSQVTVAVRVRPFTKREKIEKASQVVFMSGKEITVEHPDTKQVYNFIY
DVSFWSFDECHPHYASQTTVYEKLAAPLLERAFEGFNTCLFAYGQTGSGKSYTMMGFSEE
PGIIPRFCEDLFSQVARKQTQEVSYHIEMSFFEVYNEKIHDLLVCKDENGQRKQPLRVRE
HPVYGPYVEALSMLLKESLGGNSKTAMIATISPAASNIEETLSTLRYANQARLIVNIAKV
NEDMNAKLIRELKAEIAKLKAAQRNSRNIDPERYRLCRQEITSLRMKLHQQERDMAEMQR
VWKEKFEQAEKRKLQETKELQKAGIMFQMDNHLPNLVNLNEDPQLSEMLLYMIKEGTTTV
GKYKPNSSHDIQLSGVLIADDHCTIKNFGGTVSIIPVGEAKTYVNGKHILEITVLRHGDR
VILGGDHYFRFNHPVEVQKGKRPSGRDTPISEGPKDFEFAKNELLMAQRSQLEAEIKEAQ
LKAKEEMMQGIQIAKEMAQQELSSQKAAYESKIKALEAELREESQRKKMQEINNQKANHK
IEELEKAKQHLEQEIYVNKKRLEMETLATKQALEDHSIRHARILEALETEKQKIAKEVQI
LQQNRNNRDKTFTVQTTWSSMKLSMMIQEANAISSKLKTYYVFGRHDISDKSSSDTSIRV
RNLKLGISTFWSLEKFESKLAAMKELYESNGSNRGEDAFCDPEDEWEPDITDAPVSSLSR
RRSRSLMKNRRISGCLHDIQVHPIKNLHSSHSSGLMDKSSTIYSNSAESFLPGICKELIG
SSLDFFGQSYDEERTIADSLINSFLKIYNGLFAISKAHEEQDEESQDNLFSSDRAIQSLT
IQTACAFEQLVVLMKHWLSDLLPCTNIARLEDELRQEVKKLGGYLQLFLQGCCLDISSMI
KEAQKNAIQIVQQAVKYVGQLAVLKGSKLHFLENGNNKAASVQEEFMDAVCDGVGLGMKI
LLDSGLEKAKELQHELFRQCTKNEKSFRRQVQEENFEYQDFKRMVNRAPEFLKLKHCLEK
AIEIIISALKGCHSDINLLQTCVESIRNLASDFYSDFSVPSTSVGSYESRVTHIVHQELE
SLAKSLLFCFESEESPDLLKPWETYNQNTKEEHQQSKSSGIDGSKNKGVPKRVYELHGSS
PAVSSEECTPSRIQWV

>gi568815597r:200544257_200766740|GENSCAN_predicted_CDS_2|6531_bp
atgtttgttccaagatctctaaaaatcaagaggaatgctaatgatgatggcaaaagttgt
gtggctaagataattaaaccagacccagaagaccttcagttggacaaaagcagagatgtt
cccgttgatgctgtagctacagaagcagccacaatagacaggcacatcagcgaatcatgc
cctttccccagcccaggtggccagttggcagaggttcattcagtaagtcccgagcagggt
gcgaaggacagccatccttctgaagagcccgttaagtcattttccaaaacacagcgctgg
gcagaaccaggggaacccatctgtgttgtctgtggtcgttatggagagtatatctgtgat
aagacagatgaagatgtgtgtagtttggagtgtaaagcgaaacatcttctacaagttaag
gaaaaggaagagaaatcaaaactcagcaatccacagaaggctgattctgagccagagtct
ccactgaatgcttcctatgtctacaaagagcacccctttattttgaaccttcaggaagac
cagattgaaaatcttaaacagcagctgggaattttagttcaagggcaagaagtcaccagg
cccattattgactttgaacattgtagtctccctgaggtcttaaatcacaacttgaagaaa
tcaggctatgaggtgccaactcccattcaaatgcagatgattcctgtgggacttctggga
agagacattctggccagtgcagatactggctcaggaaaaacagctgcttttcttcttcct
gttatcatgcgagctttattcgagagcaaaactccatctgcgctcattcttacaccaacc
agagagttagccattcagatagagagacaagctaaagaattgatgagtggcctgccacgc
atgaaaactgtgcttcttgtagggggcttacccttacccccacagctttatcgtctgcaa
caacatgttaaggttatcatagcaacccctgggcgacttctggatataataaagcagagc
tctgtagaactctgtggtgtaaagattgtggtagtagatgaagtgattcttatcttcaga
gaggtttgggccacactgactaccacaattccaactagcatagaacagctagcaagccag
cttctgcataatcctgtgagaattatcactggagaaaagaacctaccttgtgccaatgta
cgtcagattattttgtgggtagaagacccagccaaaaagaaaaaattatttgaaatttta
aatgataagaaactctttaagcctccagtgttagtatttgtggactgcaaactaggagca
gatcttttgagtgaagccgttcagaaaatcacagggctgaaaagcatatctatacattca
gagaagtcgcaaatagaaaggaaaaacatattgaagggattacttgaaggagactatgaa
gttgtagtgagcacaggagtcttgggacgaggcctagacttgatcagtgtcaggctggtt
gtcaattttgatatgccttcaagtatggatgagtatgtccatcaggaaaatacctacaag
tctacttggaggaatccccagcattttcaacaggatgtcagaatgaccttgggctatgtt
ggcaaagcacaatgggaagaagacaaccaattgaagagacggctaccggagcccaaccac
cggcacttccggggggcgggtggaagcaaaggcgcggcacccgacgcgacgcccagcagc
caatcagaaggcggggcgcccattcaaattgcggccttctggggagccggcgctggaggt
ggtgagtggcgtggggactgtgtcgagggggtccccaaggtgccggaccctgcggagggg
cgaagtttcggcactggggagggcgtgcggacgctttccctacaggcgaccactgctctg
cgggcgggtggtcttagctccagtcccccattcagttcctcagcattccaggtcggcggc
gaaggggtccccgaacgaagggcgcaaggcagcgtctctgctgggaccgggaagccggac
ttcagggcctctcggcccgtgggcttctccccgagtctccccgagtcggttggcattaag
agttcatcactgaatgccctcacccacagtagccgacttaagctgcatttgaagtcggat
atgtcagaatgtgaaaatgatgatccattattgagatctgcaggtaaagtcagagacata
aatagaacttatgttatttctgccagtagaaaaacagcagacatgccccttacccctaat
cctgtaggtagattggcacttcagaggagaactacaaggaacaaagaatcatctttgctt
gttagtgagttggaagacacaactgaaaaaacagcagaaacacgtcttacattacaacgt
cgtgctaaaacagattctgcagaaaagtggaaaacagctgaaatagattctgtcaaaatg
acactgaatgtgggaggtgaaacagaaaataatggtgtttctaaggaaagtagaacaaat
gtaaggattgtaaataatgctaaaaactcttttgttgcctcttctgtacctttagatgaa
gatccacaggtcattgaaatgatggctgataagaaatacaaagaaacattttctgccccc
agtagagcaaatgaaaatgttgcacttaagtactcaagtaatagaccacccattgcttcc
ctgagtcagactgaagttgttagatcaggacacttgacaacgaaacctactcagagcaag
ttggatatcaaagtgttgggaacaggaaacttgtatcatagaagtattgggaaggaaatt
gcaaaaacttcaaataaatttgggagcttagaaaaaagaacacctacaaaatgtacaaca
gaacacaaactgacaacaaagtgcagcctgcctcagcttaagagcccagctccatcaata
ctgaagaatagaatgtctaaccttcaagttaaacaaagaccaaaaagttcctttcttgca
aataaacaggaaagatccgcagaaaatacaattcttcccgaagaagaaactgtagttcag
aacacctctgcaggaaaagaccccttaaaagtagagaatagtcaagtgacagtggcagta
cgcgtaagacctttcaccaagagagagaagattgaaaaagcatcccaggtagtcttcatg
agtgggaaagaaataactgtggaacaccctgacacgaaacaagtttataattttatttat
gatgtttcattctggtcttttgatgaatgtcatcctcactacgctagccagacaactgtc
tatgagaagctagcagcaccactcctagaaagagccttcgaaggcttcaatacctgtctt
tttgcttatggtcagactggctctggaaaatcatatacgatgatgggatttagtgaagaa
ccaggaataattccaagattttgtgaagatcttttttctcaagtagccagaaaacaaacc
caagaggtcagctatcacattgaaatgagcttctttgaagtatataatgaaaaaattcac
gaccttctggtttgtaaagatgaaaatgggcagagaaagcaaccactgagagtgagggaa
catcctgtttatggaccatatgttgaagcactgtcaatgctgttaaaagaaagtctgggt
ggaaattcaaaaactgcaatgattgctacgattagtcccgctgccagcaacatagaagaa
acattaagcacacttagatatgctaaccaagcccgtttaatagtcaacattgctaaagta
aatgaagatatgaacgctaagttaattagagaattgaaggcagaaattgcaaagctaaaa
gctgctcagagaaacagtcggaatattgaccctgaacgatacaggctctgtcggcaagaa
ataacatccttaagaatgaaactgcatcaacaggagagagacatggcagaaatgcaaaga
gtgtggaaagaaaagtttgaacaagctgaaaaaagaaaacttcaagaaacaaaagagtta
cagaaagcaggaattatgtttcaaatggacaatcatttaccaaaccttgttaatctgaat
gaagatccacaactatctgagatgctgctatatatgataaaagaaggaacaactacagtt
ggaaagtataaaccaaactcaagccatgatattcagttatctggggtgctgattgctgat
gatcattgtactatcaaaaattttggtgggacagtgagtattatcccagttggggaagca
aagacatatgtaaatggaaaacatattttggaaatcacagtattacgtcatggtgatcga
gtgattcttggtggagatcattattttagatttaatcatccagtagaagtccagaaagga
aaaaggccatctggaagagatactcctataagtgagggtccaaaagactttgaatttgca
aaaaatgagttgctcatggcacagagatcacaacttgaagcagaaataaaagaggctcag
ttgaaggcaaaggaagaaatgatgcaaggaatccagattgcaaaagaaatggctcagcaa
gagctttcttctcaaaaagctgcatatgaaagcaaaataaaagcactggaagcagaactg
agagaagagtctcaaaggaaaaaaatgcaggaaataaataaccagaaggctaatcacaaa
attgaggaattagaaaaggcaaagcagcatcttgaacaggaaatatatgtcaacaaaaag
cgattagaaatggaaacattggctacaaaacaggctttagaagaccatagcatccgccat
gcaagaattctggaagctttagaaactgaaaagcaaaaaattgctaaagaagtacaaatt
ctacagcagaatcggaataatagggataaaacttttacagtgcagacaacttggagctct
atgaaactctcaatgatgattcaggaagccaatgctatcagcagcaaattgaaaacatac
tatgtttttggcagacatgatatatcagataaaagtagttctgacacttctattcgggtt
cgtaacctgaaactaggaatctcaacattctggagtctggaaaagtttgaatctaaactt
gcagcaatgaaagaactttatgagagtaatggtagtaacaggggtgaagatgccttttgt
gatcctgaagatgaatgggaacccgacattacagatgcaccagtttcttcactttctaga
aggaggagtaggagtttgatgaagaacagaagaatttctggttgtttacatgacatacaa
gtccatccaattaagaatttgcattcttcacattcatcaggtttaatggacaaatcaagc
actatttactcaaattcagcagagtcctttcttcctggaatttgcaaagaattgattggt
tcttcgttagatttttttggacagagttatgatgaagaaagaactatagcagacagccta
attaatagttttcttaaaatttataatgggctatttgccatttccaaggctcatgaagaa
caagatgaagaaagtcaagataacttgttttcttctgatcgagcaatccagtcacttact
attcagactgcatgtgcttttgagcagctagtagtgctaatgaaacactggctgagtgat
ttactgccttgtaccaacatagcaagacttgaggatgagttgagacaagaagttaaaaaa
ctgggaggctacttacagttatttttgcagggatgctgtttggatatttcatcaatgata
aaagaggctcaaaagaatgcaatccaaattgtacaacaagctgtaaagtatgtggggcag
ttagcagttctgaaagggagcaagctacattttctagaaaacggtaacaataaagctgcc
agtgtccaggaggaattcatggatgctgtttgtgatggtgtaggcttaggaatgaagatt
ttattagattctggactggaaaaagcaaaagaacttcagcatgaactctttaggcagtgt
acaaaaaatgagaaaagtttcagaaggcaagtacaagaagaaaactttgaataccaagat
ttcaagaggatggttaatcgtgctccagaattcttaaagttaaaacattgcttagagaaa
gctattgaaattattatttctgcactgaaaggatgccatagtgatataaatcttctccag
acttgtgttgaaagtattcgcaacttggccagtgatttttacagtgacttcagtgtgcct
tctacttctgttggcagctatgagagtagagtaactcacattgtccaccaggaactagaa
tctctagctaagtctctcctcttttgttttgaatctgaagaaagccctgatttgttgaaa
ccctgggaaacttataatcaaaataccaaagaagaacaccaacaatctaaatcaagcggg
attgacggcagtaagaataaaggtgtaccaaagcgtgtctatgagctccatggctcatcc
ccagcagtgagctcagaggaatgcacacccagtaggattcagtgggtgtga

>gi568815597r:200544257_200766740|GENSCAN_predicted_peptide_3|377_aa
MTSGVNVAVGFSRQQLGTLDATTEIRTGCSGNNRGGTCVTALTGKLSAAVREGFMEEVTT
VEFEGAVGVSWVDRGTTLSKECRSRKTAAAAAAAEGERSSELQKGGQEKITRTLLIRQEL
RAWDSRPLPGHHLRRQQGRKTRETAAATAAGEGGDGDGREHRGGDGPAAASIKPFDHYDF
SRAKIACNLAWLVAKAFGTDKVTGSQINLHKIKHLASDVFCMSDSEAFAYYSIPFCRVTV
LSADPLCTPLACHCHYHDHQLSLCQQMCRVASLHSTIPAFHRRLGQGCLRENVPEELQEP
FYTDQYDQEHIKPPVVNLLLSAELYCRAGSLILKSDAAKPLLGHDAVIQALAQKGLYVTD
QEKLVTERDLHKKPIQM

>gi568815597r:200544257_200766740|GENSCAN_predicted_CDS_3|1131_bp
atgacctctggtgtaaatgtggccgtgggtttcagcaggcagcagctggggaccctagat
gctacgacagaaataagaacagggtgctccgggaacaacaggggaggcacctgtgtgaca
gccctgactggaaagttgtcagcagctgtcagggaaggcttcatggaggaagtgactact
gtggagtttgaaggtgcagtaggagtaagctgggtggacagaggaaccaccctgagcaag
gagtgccgcagccggaaaaccgcagcggcggcggcggcggctgagggggaacgatccagc
gagctgcagaaaggggggcaggaaaaaattacaaggacattactgataagacaggaactg
agagcttgggattcgcggcctctccccggccaccaccttcgccgtcagcaagggaggaag
acccgggagacggcagcggcgacggcggcaggggaaggaggagacggcgacgggagggag
cacagaggaggggacgggccggcggcggcctccatcaagccttttgaccactatgatttc
tccagggccaaaatcgcctgcaatctggcctggctggtggccaaagcctttgggacagat
aaggtaactggctcacagattaatttgcacaagattaaacatctggcaagtgatgtgttc
tgcatgtctgactctgaagcctttgcttattactctataccgttctgcagagtaaccgtt
ttatctgcagacccactctgtactcctcttgcttgtcactgccactaccacgaccaccag
ttgtctctctgtcagcagatgtgccgtgttgcctctctgcacagtaccatccctgcattc
cacagaagacttgggcaagggtgcctgagagaaaatgtgccagaggaacttcaagaacca
ttttacacagatcagtatgaccaggaacacatcaaaccacctgttgttaatttgcttcta
tcggctgaactatactgtcgtgctgggagtctcattctcaagagtgatgctgcaaaaccc
cttttgggccatgatgctgtaatccaggctttagcacagaaaggtctttatgtcactgac
caggaaaaattggtaactgaacgagatctccacaagaaacccatacagatg