Result of FASTA (omim) for
pF1KB8362
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8362, 443 aa
1>>>pF1KB8362 443 - 443 aa - 443 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3676+/-0.000346; mu= -5.8340+/- 0.022
mean_var=246.5007+/-52.657, 0's: 0 Z-trim(123.1): 34 B-trim: 2389 in 1/55
Lambda= 0.081689
statistics sampled from 42273 (42307) to 42273 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.496), width: 16
Scan time: 8.670
The best scores are: opt bits E(85289)
NP_002042 (OMIM: 131320,146255) trans-acting T-cel ( 443) 3145 383.3 6.8e-106
NP_001002295 (OMIM: 131320,146255) trans-acting T- ( 444) 3133 381.9 1.8e-105
XP_005252500 (OMIM: 131320,146255) PREDICTED: tran ( 444) 3133 381.9 1.8e-105
XP_005252499 (OMIM: 131320,146255) PREDICTED: tran ( 444) 3133 381.9 1.8e-105
NP_001139133 (OMIM: 137295,614038,614172,614286) e ( 480) 1342 170.8 6.7e-42
NP_116027 (OMIM: 137295,614038,614172,614286) endo ( 480) 1342 170.8 6.7e-42
NP_002040 (OMIM: 190685,300367,300835,305371,31405 ( 413) 776 104.1 7.1e-22
XP_011542199 (OMIM: 190685,300367,300835,305371,31 ( 418) 756 101.8 3.7e-21
XP_011542200 (OMIM: 190685,300367,300835,305371,31 ( 335) 748 100.8 5.9e-21
XP_006723762 (OMIM: 611496) PREDICTED: transcripti ( 397) 747 100.7 7.4e-21
NP_536721 (OMIM: 611496) transcription factor GATA ( 397) 747 100.7 7.4e-21
NP_002043 (OMIM: 187500,600576,607941,614429,61443 ( 442) 727 98.3 4.1e-20
XP_006716311 (OMIM: 187500,600576,607941,614429,61 ( 443) 724 98.0 5.3e-20
XP_016868801 (OMIM: 187500,600576,607941,614429,61 ( 443) 724 98.0 5.3e-20
XP_005272442 (OMIM: 187500,600576,607941,614429,61 ( 443) 724 98.0 5.3e-20
NP_001295022 (OMIM: 187500,600576,607941,614429,61 ( 443) 724 98.0 5.3e-20
XP_011542119 (OMIM: 187500,600576,607941,614429,61 ( 443) 724 98.0 5.3e-20
XP_005272443 (OMIM: 187500,600576,607941,614429,61 ( 443) 724 98.0 5.3e-20
XP_011542120 (OMIM: 187500,600576,607941,614429,61 ( 443) 724 98.0 5.3e-20
NP_001295023 (OMIM: 187500,600576,607941,614429,61 ( 236) 715 96.8 6.5e-20
NP_005248 (OMIM: 187500,217095,600001,601656,61447 ( 595) 672 91.9 4.8e-18
NP_001139134 (OMIM: 137295,614038,614172,614286) e ( 466) 664 90.9 7.4e-18
NP_001317528 (OMIM: 190350,190351,604386) zinc fin (1281) 255 43.0 0.0057
XP_011515570 (OMIM: 190350,190351,604386) PREDICTE (1281) 255 43.0 0.0057
NP_001269831 (OMIM: 190350,190351,604386) zinc fin (1285) 255 43.0 0.0057
NP_001269832 (OMIM: 190350,190351,604386) zinc fin (1287) 255 43.0 0.0057
XP_011515569 (OMIM: 190350,190351,604386) PREDICTE (1287) 255 43.0 0.0057
XP_006716688 (OMIM: 190350,190351,604386) PREDICTE (1294) 255 43.0 0.0057
XP_011515568 (OMIM: 190350,190351,604386) PREDICTE (1294) 255 43.0 0.0057
NP_054831 (OMIM: 190350,190351,604386) zinc finger (1294) 255 43.0 0.0057
XP_011515566 (OMIM: 190350,190351,604386) PREDICTE (1294) 255 43.0 0.0057
XP_016869290 (OMIM: 190350,190351,604386) PREDICTE (1317) 255 43.0 0.0058
>>NP_002042 (OMIM: 131320,146255) trans-acting T-cell-sp (443 aa)
initn: 3145 init1: 3145 opt: 3145 Z-score: 2022.1 bits: 383.3 E(85289): 6.8e-106
Smith-Waterman score: 3145; 99.8% identity (100.0% similar) in 443 aa overlap (1-443:1-443)
10 20 30 40 50 60
pF1KB8 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFNIDGQGNHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFNIDGQGNHV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PPYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSPFSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PPYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSPFSKT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SIHHGSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SIHHGSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KECLKYQVPLPDSMKLESSHSRGSMTALGGASSSTHHPITTYPPYVPEYSSGLFPPSSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KECLKYQVPLPDSMKLESSHSRGSMTALGGASSSTHHPITTYPPYVPEYSSGLFPPSSLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 GGSPTGFGCKSRPKARSSTGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GGSPTGFGCKSRPKARSSTGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 IKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYELHNINRPLTMKKEG
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
NP_002 IKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB8 IQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFNPAALSRHMSSLSHISPFSHSSHMLTTPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 IQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFNPAALSRHMSSLSHISPFSHSSHMLTTPT
370 380 390 400 410 420
430 440
pF1KB8 PMHPPSSLSFGPHHPSSMVTAMG
:::::::::::::::::::::::
NP_002 PMHPPSSLSFGPHHPSSMVTAMG
430 440
>>NP_001002295 (OMIM: 131320,146255) trans-acting T-cell (444 aa)
initn: 2010 init1: 1849 opt: 3133 Z-score: 2014.4 bits: 381.9 E(85289): 1.8e-105
Smith-Waterman score: 3133; 99.5% identity (99.8% similar) in 444 aa overlap (1-443:1-444)
10 20 30 40 50 60
pF1KB8 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFNIDGQGNHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFNIDGQGNHV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PPYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSPFSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSPFSKT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SIHHGSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIHHGSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KECLKYQVPLPDSMKLESSHSRGSMTALGGASSSTHHPITTYPPYVPEYSSGLFPPSSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KECLKYQVPLPDSMKLESSHSRGSMTALGGASSSTHHPITTYPPYVPEYSSGLFPPSSLL
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 GGSPTGFGCKSRPKARSST-GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
NP_001 GGSPTGFGCKSRPKARSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 LIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYELHNINRPLTMKKE
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
NP_001 LIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 GIQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFNPAALSRHMSSLSHISPFSHSSHMLTTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFNPAALSRHMSSLSHISPFSHSSHMLTTP
370 380 390 400 410 420
420 430 440
pF1KB8 TPMHPPSSLSFGPHHPSSMVTAMG
::::::::::::::::::::::::
NP_001 TPMHPPSSLSFGPHHPSSMVTAMG
430 440
>>XP_005252500 (OMIM: 131320,146255) PREDICTED: trans-ac (444 aa)
initn: 2010 init1: 1849 opt: 3133 Z-score: 2014.4 bits: 381.9 E(85289): 1.8e-105
Smith-Waterman score: 3133; 99.5% identity (99.8% similar) in 444 aa overlap (1-443:1-444)
10 20 30 40 50 60
pF1KB8 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFNIDGQGNHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFNIDGQGNHV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PPYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSPFSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSPFSKT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SIHHGSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SIHHGSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KECLKYQVPLPDSMKLESSHSRGSMTALGGASSSTHHPITTYPPYVPEYSSGLFPPSSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KECLKYQVPLPDSMKLESSHSRGSMTALGGASSSTHHPITTYPPYVPEYSSGLFPPSSLL
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 GGSPTGFGCKSRPKARSST-GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_005 GGSPTGFGCKSRPKARSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 LIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYELHNINRPLTMKKE
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
XP_005 LIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 GIQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFNPAALSRHMSSLSHISPFSHSSHMLTTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GIQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFNPAALSRHMSSLSHISPFSHSSHMLTTP
370 380 390 400 410 420
420 430 440
pF1KB8 TPMHPPSSLSFGPHHPSSMVTAMG
::::::::::::::::::::::::
XP_005 TPMHPPSSLSFGPHHPSSMVTAMG
430 440
>>XP_005252499 (OMIM: 131320,146255) PREDICTED: trans-ac (444 aa)
initn: 2010 init1: 1849 opt: 3133 Z-score: 2014.4 bits: 381.9 E(85289): 1.8e-105
Smith-Waterman score: 3133; 99.5% identity (99.8% similar) in 444 aa overlap (1-443:1-444)
10 20 30 40 50 60
pF1KB8 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFNIDGQGNHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFNIDGQGNHV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 PPYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSPFSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PPYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSPFSKT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 SIHHGSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SIHHGSPGPLSVYPPASSSSLSGGHASPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 KECLKYQVPLPDSMKLESSHSRGSMTALGGASSSTHHPITTYPPYVPEYSSGLFPPSSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KECLKYQVPLPDSMKLESSHSRGSMTALGGASSSTHHPITTYPPYVPEYSSGLFPPSSLL
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 GGSPTGFGCKSRPKARSST-GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
XP_005 GGSPTGFGCKSRPKARSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB8 LIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYELHNINRPLTMKKE
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
XP_005 LIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB8 GIQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFNPAALSRHMSSLSHISPFSHSSHMLTTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GIQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFNPAALSRHMSSLSHISPFSHSSHMLTTP
370 380 390 400 410 420
420 430 440
pF1KB8 TPMHPPSSLSFGPHHPSSMVTAMG
::::::::::::::::::::::::
XP_005 TPMHPPSSLSFGPHHPSSMVTAMG
430 440
>>NP_001139133 (OMIM: 137295,614038,614172,614286) endot (480 aa)
initn: 1477 init1: 814 opt: 1342 Z-score: 873.2 bits: 170.8 E(85289): 6.7e-42
Smith-Waterman score: 1918; 62.3% identity (77.7% similar) in 485 aa overlap (1-443:1-480)
10 20 30 40 50
pF1KB8 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFN-IDGQGNH
:::. .::::..: :::::.::::.:::::.:.::. :: :.::::.:: .:.:::
NP_001 MEVAPEQPRWMAH--PAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGN-
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 VPPYYGNSVRATVQ-RYPPTHH---GSQVCRPPLLHG-SLPWLDGGKALGSH---HTASP
:::.: ..: .. : :.: :.:.::: :::. .::::::::: : : .:
NP_001 --PYYANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNP
60 70 80 90 100 110
120 130 140 150
pF1KB8 WNLSPFSKTSIHH---GSPG-PLSVYPPASSSSLSGG------------HASPHLFTFPP
:..:::::: .: :.:: :::::: :...: .:. :.. ::: :::
NP_001 WTVSPFSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFPP
120 130 140 150 160 170
160 170 180 190 200
pF1KB8 TPPKDVSPDPSLS---TPGSA---GSA-RQDEKECLKYQVPLPDSMKLESSHSRGSMTAL
::::.:::::: . .:.:. ::: : ..:. .:::: : .:::.::. :
NP_001 TPPKEVSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLAT
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB8 GGASSSTHHPITTYPPYVP----EYSSGLFPPSSLLGGSPTGFGCKSRPKARS-STGREC
:.. .::::: ::: ::: .:::::: :...::: ..: :.: :::: : ::::
NP_001 MGTQPATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGREC
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB8 VNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTT
::::::.::::::::::::::::::::::::::::::::::::::::::::: :::::::
NP_001 VNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTT
300 310 320 330 340 350
330 340 350 360 370 380
pF1KB8 TTTLWRRNANGDPVCNACGLYYELHNINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDSLE
::::::::::::::::::::::.:::.:::::::::::::::::::.:::: :: . .:
NP_001 TTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECFE
360 370 380 390 400 410
390 400 410 420 430
pF1KB8 DFPK-----NSSFNPAALSRHMSSLSHISPFSHSSHMLTTPTPMHPPSSLSFGPHHPSSM
.. : .: :. :::. ::. ..:. :::::.:.: ::::.:: :::::: :::::
NP_001 ELSKCMQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSM
420 430 440 450 460 470
440
pF1KB8 VTAMG
:::::
NP_001 VTAMG
480
>>NP_116027 (OMIM: 137295,614038,614172,614286) endothel (480 aa)
initn: 1477 init1: 814 opt: 1342 Z-score: 873.2 bits: 170.8 E(85289): 6.7e-42
Smith-Waterman score: 1918; 62.3% identity (77.7% similar) in 485 aa overlap (1-443:1-480)
10 20 30 40 50
pF1KB8 MEVTADQPRWVSHHHPAVLNGQHPDTHHPGLSHSYMDAAQYPLPEEVDVLFN-IDGQGNH
:::. .::::..: :::::.::::.:::::.:.::. :: :.::::.:: .:.:::
NP_116 MEVAPEQPRWMAH--PAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGN-
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 VPPYYGNSVRATVQ-RYPPTHH---GSQVCRPPLLHG-SLPWLDGGKALGSH---HTASP
:::.: ..: .. : :.: :.:.::: :::. .::::::::: : : .:
NP_116 --PYYANPAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNP
60 70 80 90 100 110
120 130 140 150
pF1KB8 WNLSPFSKTSIHH---GSPG-PLSVYPPASSSSLSGG------------HASPHLFTFPP
:..:::::: .: :.:: :::::: :...: .:. :.. ::: :::
NP_116 WTVSPFSKTPLHPSAAGGPGGPLSVYPGAGGGSGGGSGSSVASLTPTAAHSGSHLFGFPP
120 130 140 150 160 170
160 170 180 190 200
pF1KB8 TPPKDVSPDPSLS---TPGSA---GSA-RQDEKECLKYQVPLPDSMKLESSHSRGSMTAL
::::.:::::: . .:.:. ::: : ..:. .:::: : .:::.::. :
NP_116 TPPKEVSPDPSTTGAASPASSSAGGSAARGEDKDGVKYQVSLTESMKMESGSPLRPGLAT
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB8 GGASSSTHHPITTYPPYVP----EYSSGLFPPSSLLGGSPTGFGCKSRPKARS-STGREC
:.. .::::: ::: ::: .:::::: :...::: ..: :.: :::: : ::::
NP_116 MGTQPATHHPIPTYPSYVPAAAHDYSSGLFHPGGFLGGPASSFTPKQRSKARSCSEGREC
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB8 VNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTT
::::::.::::::::::::::::::::::::::::::::::::::::::::: :::::::
NP_116 VNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTT
300 310 320 330 340 350
330 340 350 360 370 380
pF1KB8 TTTLWRRNANGDPVCNACGLYYELHNINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDSLE
::::::::::::::::::::::.:::.:::::::::::::::::::.:::: :: . .:
NP_116 TTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKSKKGAECFE
360 370 380 390 400 410
390 400 410 420 430
pF1KB8 DFPK-----NSSFNPAALSRHMSSLSHISPFSHSSHMLTTPTPMHPPSSLSFGPHHPSSM
.. : .: :. :::. ::. ..:. :::::.:.: ::::.:: :::::: :::::
NP_116 ELSKCMQEKSSPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSM
420 430 440 450 460 470
440
pF1KB8 VTAMG
:::::
NP_116 VTAMG
480
>>NP_002040 (OMIM: 190685,300367,300835,305371,314050) e (413 aa)
initn: 766 init1: 714 opt: 776 Z-score: 513.7 bits: 104.1 E(85289): 7.1e-22
Smith-Waterman score: 782; 40.7% identity (60.9% similar) in 381 aa overlap (105-442:51-408)
80 90 100 110 120 130
pF1KB8 YPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSPFSKTSIHHGSPGPLSVYP
: ::. :. . . .. :: ..:::
NP_002 PALVSSTPESGVFFPSGPEGLDAAASSTAPSTATAAAAALAYYRDAEAYRHSP-VFQVYP
30 40 50 60 70
140 150 160 170 180
pF1KB8 PASS-SSLSGGHASPHL-FTFPPT---PPKDVSPDPSLSTPGSA----GSARQDEKECLK
. .. :: ::. ... : : . : : : : .. :.. . : ::
NP_002 LLNCMEGIPGG--SPYAGWAYGKTGLYPASTVCPTREDSPPQAVEDLDGKGSTSFLETLK
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB8 YQVPLPDSMKLESSHSRGSMTALGGA-SSSTHHPITTYPPYVPEYSSGLFPPSSLLGGSP
. :: . .:: : :: : ..: :..:: .: :. :::
NP_002 TERLSPD------------LLTLGPALPSSLPVPNSAYGG--PDFSSTFFSPT----GSP
140 150 160 170
250 260 270 280 290
pF1KB8 TGFGCKSRPKARSST------GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNR
. . : :: :.. .:::::::::.::::::: ::::::::::::::::::::
NP_002 LNSAAYSSPKLRGTLPLPPCEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNR
180 190 200 210 220 230
300 310 320 330 340 350
pF1KB8 PLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYELHNINRPLTMKK
:::.::.:: ...::::.:.::::::::::::::.::::::::::::.::..::::::.:
NP_002 PLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVNRPLTMRK
240 250 260 270 280 290
360 370 380 390
pF1KB8 EGIQTRNRKMSSKSKKCKKVHDSL-----EDFPKNS--------------------SFNP
.:::::::: :.:.: :: .:: . : .. ...:
NP_002 DGIQTRNRKASGKGK--KKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASGLTLGP
300 310 320 330 340 350
400 410 420 430 440
pF1KB8 AALSRHMSSLSHISPFSHSSHMLTTPTPM--HPPSSLSFGPHHPSSMVTAMG
. .. ...:. . . ::.. : :. : .:. :: :.. .:..
NP_002 PGTAHLYQGLGPVVLSGPVSHLMPFPGPLLGSPTGSFPTGPMPPTTSTTVVAPLSS
360 370 380 390 400 410
>>XP_011542199 (OMIM: 190685,300367,300835,305371,314050 (418 aa)
initn: 752 init1: 584 opt: 756 Z-score: 500.8 bits: 101.8 E(85289): 3.7e-21
Smith-Waterman score: 762; 40.2% identity (60.1% similar) in 386 aa overlap (105-442:51-413)
80 90 100 110 120 130
pF1KB8 YPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSPFSKTSIHHGSPGPLSVYP
: ::. :. . . .. :: ..:::
XP_011 PALVSSTPESGVFFPSGPEGLDAAASSTAPSTATAAAAALAYYRDAEAYRHSP-VFQVYP
30 40 50 60 70
140 150 160 170 180
pF1KB8 PASS-SSLSGGHASPHL-FTFPPT---PPKDVSPDPSLSTPGSA----GSARQDEKECLK
. .. :: ::. ... : : . : : : : .. :.. . : ::
XP_011 LLNCMEGIPGG--SPYAGWAYGKTGLYPASTVCPTREDSPPQAVEDLDGKGSTSFLETLK
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB8 YQVPLPDSMKLESSHSRGSMTALGGA-SSSTHHPITTYPPYVPEYSSGLFPPSSLLGGSP
. :: . .:: : :: : ..: :..:: .: :. :::
XP_011 TERLSPD------------LLTLGPALPSSLPVPNSAYGG--PDFSSTFFSPT----GSP
140 150 160 170
250 260 270 280 290
pF1KB8 TGFGCKSRPKARSST------GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNR
. . : :: :.. .:::::::::.::::::: ::::::::::::::::::::
XP_011 LNSAAYSSPKLRGTLPLPPCEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNR
180 190 200 210 220 230
300 310 320 330 340 350
pF1KB8 PLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYELHN-----INRP
:::.::.:: ...::::.:.::::::::::::::.::::::::::::.::. .:::
XP_011 PLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQPPFWQVNRP
240 250 260 270 280 290
360 370 380
pF1KB8 LTMKKEGIQTRNRKMSSKSKKCKKVHDSL-----EDFPKNS-------------------
:::.:.:::::::: :.:.: :: .:: . : ..
XP_011 LTMRKDGIQTRNRKASGKGK--KKRGSSLGGTGAAEGPAGGFMVVAGGSGSGNCGEVASG
300 310 320 330 340 350
390 400 410 420 430 440
pF1KB8 -SFNPAALSRHMSSLSHISPFSHSSHMLTTPTPM--HPPSSLSFGPHHPSSMVTAMG
...: . .. ...:. . . ::.. : :. : .:. :: :.. .:..
XP_011 LTLGPPGTAHLYQGLGPVVLSGPVSHLMPFPGPLLGSPTGSFPTGPMPPTTSTTVVAPLS
360 370 380 390 400 410
XP_011 S
>>XP_011542200 (OMIM: 190685,300367,300835,305371,314050 (335 aa)
initn: 729 init1: 584 opt: 748 Z-score: 497.2 bits: 100.8 E(85289): 5.9e-21
Smith-Waterman score: 753; 45.8% identity (66.4% similar) in 286 aa overlap (196-442:53-330)
170 180 190 200 210 220
pF1KB8 SLSTPGSAGSARQDEKECLKYQVPLPDSMKLESSHSRGSMTALGGA-SSSTHHPITTYPP
:.. . .. .:: : :: : ..:
XP_011 ASTVCPTREDSPPQAVEDLDGKGSTSFLETLKTERLSPDLLTLGPALPSSLPVPNSAYGG
30 40 50 60 70 80
230 240 250 260 270
pF1KB8 YVPEYSSGLFPPSSLLGGSPTGFGCKSRPKARSST------GRECVNCGATSTPLWRRDG
:..:: .: :. ::: . . : :: :.. .:::::::::.:::::::
XP_011 --PDFSSTFFSPT----GSPLNSAAYSSPKLRGTLPLPPCEARECVNCGATATPLWRRDR
90 100 110 120 130
280 290 300 310 320 330
pF1KB8 TGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVC
:::::::::::::::::::::::.::.:: ...::::.:.::::::::::::::.:::::
XP_011 TGHYLCNACGLYHKMNGQNRPLIRPKKRLIVSKRAGTQCTNCQTTTTTLWRRNASGDPVC
140 150 160 170 180 190
340 350 360 370 380
pF1KB8 NACGLYYELHN-----INRPLTMKKEGIQTRNRKMSSKSKKCKKVHDSL-----EDFPKN
:::::::.::. .::::::.:.:::::::: :.:.:: : .:: . : .
XP_011 NACGLYYKLHQPPFWQVNRPLTMRKDGIQTRNRKASGKGKK--KRGSSLGGTGAAEGPAG
200 210 220 230 240 250
390 400 410 420
pF1KB8 S--------------------SFNPAALSRHMSSLSHISPFSHSSHMLTTPTPM--HPPS
. ...: . .. ...:. . . ::.. : :. : .
XP_011 GFMVVAGGSGSGNCGEVASGLTLGPPGTAHLYQGLGPVVLSGPVSHLMPFPGPLLGSPTG
260 270 280 290 300 310
430 440
pF1KB8 SLSFGPHHPSSMVTAMG
:. :: :.. .:..
XP_011 SFPTGPMPPTTSTTVVAPLSS
320 330
>>XP_006723762 (OMIM: 611496) PREDICTED: transcription f (397 aa)
initn: 889 init1: 651 opt: 747 Z-score: 495.5 bits: 100.7 E(85289): 7.4e-21
Smith-Waterman score: 747; 41.8% identity (61.8% similar) in 361 aa overlap (98-434:18-359)
70 80 90 100 110 120
pF1KB8 VRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKALGSHHTASPWNLSP------FSKTS
:.:. : . ..:: . : .: :
XP_006 MYQSLALAASPRQAAYADSGSFLHAPGAGSPMFVPPARVPSMLSYLS
10 20 30 40
130 140 150 160 170
pF1KB8 IHHGSPGP--LSVYP----PASSSSLSGGHASPHLFTFPPTP-PKDVSPDP---SLSTPG
. :: : :.. : :...: . : .::: ::. : .. : : : ::
XP_006 GCEPSPQPPELAARPGWAQTATADSSAFGPGSPH----PPAAHPPGATAFPFAHSPSGPG
50 60 70 80 90 100
180 190 200 210 220 230
pF1KB8 SAGSARQDEKECLKYQVPLPDSMKLESSHSRGSMTALGGASSSTHHPITTYPPYVPEYSS
:.::: .. :: : .. . .: :.: :. .: . : . ...
XP_006 SGGSA--GGRDGSAYQGALLPREQFAAPLGRPV-----GTSYSATYPAYVSPDVAQSWTA
110 120 130 140 150
240 250 260 270 280
pF1KB8 GLFPPSSLLG--GSPTGFGCKSRPKARSSTGRECVNCGATSTPLWRRDGTGHYLCNACGL
: : : : : : : .. . . ::::::::: ::::::::::::::::::::
XP_006 GPFDGSVLHGLPGRRPTF-VSDFLEEFPGEGRECVNCGALSTPLWRRDGTGHYLCNACGL
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB8 YHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYELHN
:::::: ::::..:..:::..:::: :.::.::.:::::::..:.:::::::::..::.
XP_006 YHKMNGVNRPLVRPQKRLSSSRRAGLCCTNCHTTNTTLWRRNSEGEPVCNACGLYMKLHG
220 230 240 250 260 270
350 360 370 380 390 400
pF1KB8 INRPLTMKKEGIQTRNRKMSSKSKKCKKVHDSLEDFPKNSSFNPAALSRHMSS--LSHIS
. :::.::::.::::.: : : :.. : .:.: .:.:.. :: :. .
XP_006 VPRPLAMKKESIQTRKR----KPKTIAKARGS-SGSTRNASASPSAVASTDSSAATSKAK
280 290 300 310 320 330
410 420 430 440
pF1KB8 PFSHSSHMLTTPTPMHPPSSL----SFGPHHPSSMVTAMG
: : .: . :. : : .: :..: :
XP_006 P-SLASPVCPGPS-MAPQASGQEDDSLAPGHLEFKFEPEDFAFPSTAPSPQAGLRGALRQ
340 350 360 370 380
XP_006 EAWCALALA
390
443 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 12:09:40 2016 done: Fri Nov 4 12:09:41 2016
Total Scan time: 8.670 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]