Result of FASTA (ccds) for pF1KB8361
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8361, 144 aa
  1>>>pF1KB8361 144 - 144 aa - 144 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.5326+/-0.000789; mu= 16.6766+/- 0.048
 mean_var=85.7676+/-16.495, 0's: 0 Z-trim(110.4): 26  B-trim: 51 in 1/49
 Lambda= 0.138488
 statistics sampled from 11576 (11593) to 11576 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.73), E-opt: 0.2 (0.356), width:  16
 Scan time:  1.690

The best scores are:                                      opt bits E(32554)
CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1          ( 144) 1026 213.8 2.9e-56
CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1         ( 145)  520 112.7 7.9e-26
CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1         ( 142)  487 106.1 7.5e-24
CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1           ( 138)  462 101.1 2.4e-22
CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1         ( 211)  414 91.8 2.4e-19
CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16       ( 165)  363 81.4 2.4e-16
CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12        ( 148)  338 76.4 7.1e-15


>>CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1               (144 aa)
 initn: 1026 init1: 1026 opt: 1026  Z-score: 1123.6  bits: 213.8 E(32554): 2.9e-56
Smith-Waterman score: 1026; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
               70        80        90       100       110       120

              130       140    
pF1KB8 NKTTYNKKYQYYSNKHCRGSTPRC
       ::::::::::::::::::::::::
CCDS20 NKTTYNKKYQYYSNKHCRGSTPRC
              130       140    

>>CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1              (145 aa)
 initn: 495 init1: 329 opt: 520  Z-score: 577.2  bits: 112.7 E(32554): 7.9e-26
Smith-Waterman score: 520; 46.9% identity (73.1% similar) in 145 aa overlap (1-144:1-145)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       :.  :: ..... :..  .:...:...:.: .:::   :::  ::::::.::::.:::::
CCDS20 MELALLCGLVVMAGVIPIQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDAT
               10        20        30        40        50        60

               70        80        90       100        110         
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDS-CRSQLCECDKAAATCFA
       : :: :::::: .:. .::.     :... : . : :. . : :..::: ::: .: :. 
CCDS20 DWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLK
               70        80        90       100       110       120

     120       130       140    
pF1KB8 RNKTTYNKKYQYYSNKHCRGSTPRC
       ::  ::.:. ..:   ::::.:: :
CCDS20 RNLDTYQKRLRFYWRPHCRGQTPGC
              130       140     

>>CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1              (142 aa)
 initn: 500 init1: 440 opt: 487  Z-score: 541.6  bits: 106.1 E(32554): 7.5e-24
Smith-Waterman score: 487; 53.6% identity (67.4% similar) in 138 aa overlap (9-144:6-142)

               10          20        30        40        50        
pF1KB8 MKTLLLLAVIMIFGLLQA--HGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKD
               :.... :: :   ::::.:  ::.  ::: .::.:. :::.::.::   : :
CCDS20    MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGK-SALQYNDYGCYCGIGGSHWPVD
                  10        20        30         40        50      

       60        70        80        90       100       110        
pF1KB8 ATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCF
        :: :: .::::: :::: ::  :. .: :: :   : :: . .:.   ::::: :: ::
CCDS20 QTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCF
         60        70        80        90       100       110      

      120       130       140    
pF1KB8 ARNKTTYNKKYQYYSNKHCRGSTPRC
        ::  :::.:: .: :: : : :: :
CCDS20 RRNLGTYNRKYAHYPNKLCTGPTPPC
        120       130       140  

>>CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1                (138 aa)
 initn: 469 init1: 455 opt: 462  Z-score: 514.8  bits: 101.1 E(32554): 2.4e-22
Smith-Waterman score: 462; 45.3% identity (70.8% similar) in 137 aa overlap (1-137:1-137)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       :: :: :: ..  ..  ..:.:.... ::. .:::.:  .::::::.:: ::::.:::.:
CCDS20 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
       : :: .:: :: :::..::. .  :::.  . . .::     :. .:: ::.  . :. :
CCDS20 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130       140    
pF1KB8 NKTTYNKKYQYYSNKHCRGSTPRC
       :  .:: .:::. :  :       
CCDS20 NLRSYNPQYQYFPNILCS      
              130              

>>CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1              (211 aa)
 initn: 349 init1: 296 opt: 414  Z-score: 460.9  bits: 91.8 E(32554): 2.4e-19
Smith-Waterman score: 414; 38.8% identity (67.3% similar) in 147 aa overlap (1-144:44-188)

                                             10        20        30
pF1KB8                               MKTLLLLAVIMIFGLLQAHGNLVNFHRMIK
                                     :: .. .:..    :  :::.:.:.. :..
CCDS20 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
            20        30        40        50        60        70   

               40        50        60        70        80          
pF1KB8 LTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFS-
        .::. : ::.  :::.::.::::.::: .: :: .:::::..:  .::      :  . 
CCDS20 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
            80        90       100       110       120       130   

      90         100       110       120       130       140       
pF1KB8 NSGSRITCA--KQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC   
       .....:.:.  ..  : .: : :::  . :.  .  :: ..:. . : .:.: :: :   
CCDS20 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIY
           140       150       160         170       180       190 

CCDS20 EPPPEEVTCSHQSPAPPAPP
             200       210 

>>CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16            (165 aa)
 initn: 336 init1: 211 opt: 363  Z-score: 407.0  bits: 81.4 E(32554): 2.4e-16
Smith-Waterman score: 371; 35.7% identity (64.9% similar) in 154 aa overlap (4-144:13-164)

                        10        20               30              
pF1KB8          MKTLLLLAVIMIFGLLQAHGN-----LVNFHR--MIKLT-----TGKEAAL
                   ::::  .... :: . :.     ..  ::  ...:.     .: .. .
CCDS10 MGPLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPI
               10        20        30        40        50        60

      40        50        60        70        80        90         
pF1KB8 SYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAK
       .:  ::: ::.::.:.:.:: : ::  ::::: : :. ::. :   :...  .. . :. 
CCDS10 AYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGP
               70        80        90       100       110       120

      100       110       120       130       140     
pF1KB8 -QDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC 
        ...:.  ::.::.  :.:.:  .: :: :: .: .  :. ..:.: 
CCDS10 AENKCQELLCKCDQEIANCLA--QTEYNLKYLFYPQFLCEPDSPKCD
              130       140         150       160     

>>CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12             (148 aa)
 initn: 316 init1: 197 opt: 338  Z-score: 380.6  bits: 76.4 E(32554): 7.1e-15
Smith-Waterman score: 338; 38.8% identity (67.1% similar) in 152 aa overlap (1-138:1-147)

               10        20           30         40        50      
pF1KB8 MKTLLLLAVIMIFGLLQAHGN---LVNFHRMIK-LTTGKEAALSYGFYGCHCGVGGRGSP
       :: ::.:::..  .  ..  .   . .:..::: .  :..  : :. :::.::.:: :.:
CCDS91 MK-LLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTP
                10        20        30        40        50         

         60        70         80               90       100        
pF1KB8 KDATDRCCVTHDCCYKRLEK-RGCGTKFL-------SYKFSNSGSRITCAKQDS-CRSQL
        :  :.:: ::: :: . .:  .:  :::       .:..: ::: :::..... :.. .
CCDS91 VDELDKCCQTHDNCYDQAKKLDSC--KFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFI
      60        70        80          90       100       110       

       110       120       130        140    
pF1KB8 CECDKAAATCFARNKTTYNKKYQYY-SNKHCRGSTPRC
       :.::. :: ::  .:. ::: ..   ..:.:.      
CCDS91 CNCDRNAAICF--SKAPYNKAHKNLDTKKYCQS     
       120         130       140             




144 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 12:08:18 2016 done: Fri Nov  4 12:08:18 2016
 Total Scan time:  1.690 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]
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