Result of FASTA (nr) for pF1KB8302

Result of FASTA (nr) for pF1KB8302
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 pF1KB8302, 225 aa
 vs nr library

2037593458 residues in 5938498 sequences
 statistics sampled from 60000 to 5934842 sequences
  Expectation_n fit: rho(ln(x))= 4.9896+/-0.000182; mu= 8.8393+/- 0.010
 mean_var=66.0994+/-12.793, 0's: 38 Z-trim: 72  B-trim: 7 in 1/64
 Lambda= 0.157752

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 36, opt: 24, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(5938498)
gi|12052963|emb|CAB66656.1| hypothetical protein [ ( 225) 1522 354.7 5.1e-96
gi|62901948|gb|AAY18925.1| DKFZp566L1246 [syntheti ( 249) 1515 353.1 1.7e-95
gi|73543412|gb|AAZ77800.1| potassium channel inter ( 225) 1504 350.6 8.7e-95
gi|14041963|dbj|BAB55052.1| unnamed protein produc ( 225) 1498 349.2 2.2e-94
gi|109090367|ref|XP_001111683.1| PREDICTED: simila ( 225) 1494 348.3 4.2e-94
gi|149689738|ref|XP_001499459.1| PREDICTED: simila ( 225) 1492 347.9 5.8e-94
gi|49781263|gb|AAT68467.1| KCHIP2 [Mus musculus]   ( 225) 1485 346.3 1.7e-93
gi|126273224|ref|XP_001369622.1| PREDICTED: simila ( 225) 1443 336.7 1.3e-90
gi|73621125|sp|Q9NS61|KCIP2_HUMAN Kv channel-inter ( 270) 1316 307.9 7.6e-82
gi|14091332|gb|AAK53710.1|AF367021_1 KCHIP2.4 [Hom ( 270) 1316 307.9 7.6e-82
gi|119570124|gb|EAW49739.1| Kv channel interacting ( 276) 1316 307.9 7.8e-82
gi|14091326|gb|AAK53707.1|AF367018_1 KCHIP4.2 [Hom ( 285) 1316 307.9   8e-82
gi|114632495|ref|XP_001170610.1| PREDICTED: Kv cha ( 286) 1316 307.9   8e-82
gi|119570125|gb|EAW49740.1| Kv channel interacting ( 291) 1316 307.9 8.1e-82
gi|114632497|ref|XP_001170587.1| PREDICTED: Kv cha ( 272) 1311 306.7 1.7e-81
gi|7259289|dbj|BAA92744.1| A-type potassium channe ( 270) 1310 306.5   2e-81
gi|73621127|sp|Q8WN03|KCIP2_MUSPF Kv channel-inter ( 270) 1309 306.3 2.3e-81
gi|109090359|ref|XP_001111564.1| PREDICTED: simila ( 270) 1306 305.6 3.7e-81
gi|109090357|ref|XP_001111523.1| PREDICTED: simila ( 285) 1306 305.6 3.9e-81
gi|6969257|gb|AAF33683.1|AF199598_1 A-type potassi ( 252) 1305 305.3 4.1e-81
gi|54697044|gb|AAV38894.1| Kv channel interacting  ( 253) 1305 305.3 4.1e-81
gi|149689728|ref|XP_001499442.1| PREDICTED: simila ( 270) 1304 305.1 5.1e-81
gi|9309285|dbj|BAA96740.1| potassium channel-inter ( 270) 1304 305.1 5.1e-81
gi|9309281|dbj|BAA96738.1| potassium channel-inter ( 270) 1304 305.1 5.1e-81
gi|149689730|ref|XP_001499453.1| PREDICTED: simila ( 285) 1304 305.1 5.3e-81
gi|14586768|gb|AAK70356.1|AF347114_1 Kv channel in ( 220) 1301 304.4 6.9e-81
gi|114632499|ref|XP_001170567.1| PREDICTED: simila ( 230) 1301 304.4 7.2e-81
gi|119570121|gb|EAW49736.1| Kv channel interacting ( 252) 1299 304.0 1.1e-80
gi|17981482|gb|AAL51035.1|AF454385_1 Kv channel in ( 252) 1298 303.7 1.2e-80
gi|126273214|ref|XP_001369477.1| PREDICTED: simila ( 263) 1297 303.5 1.5e-80
gi|16930769|gb|AAL32044.1|AF439339_1 Kv channel-in ( 270) 1297 303.5 1.5e-80
gi|73621126|sp|Q9JJ69|KCIP2_MOUSE Kv channel-inter ( 270) 1297 303.5 1.5e-80
gi|7259287|dbj|BAA92743.1| A-type potassium channe ( 220) 1295 303.0 1.8e-80
gi|109090361|ref|XP_001111607.1| PREDICTED: simila ( 252) 1295 303.1   2e-80
gi|17981484|gb|AAL51036.1|AF454386_1 Kv channel in ( 220) 1294 302.8 2.1e-80
gi|126273218|ref|XP_001369532.1| PREDICTED: simila ( 287) 1294 302.9 2.6e-80
gi|149689732|ref|XP_001499426.1| PREDICTED: simila ( 252) 1293 302.6 2.7e-80
gi|109090363|ref|XP_001111647.1| PREDICTED: simila ( 220) 1291 302.1 3.3e-80
gi|109090365|ref|XP_001111488.1| PREDICTED: simila ( 230) 1291 302.1 3.5e-80
gi|151555766|gb|AAI49231.1| MGC155025 protein [Bos ( 215) 1290 301.9 3.8e-80
gi|73621128|sp|Q9JM59|KCIP2_RAT Kv channel-interac ( 270) 1291 302.2 3.9e-80
gi|114150680|gb|ABI51986.1| Kv channel interacting ( 226) 1290 301.9   4e-80
gi|149689736|ref|XP_001499415.1| PREDICTED: simila ( 220) 1289 301.7 4.6e-80
gi|9309283|dbj|BAA96739.1| potassium channel-inter ( 220) 1289 301.7 4.6e-80
gi|149689734|ref|XP_001499471.1| PREDICTED: simila ( 230) 1289 301.7 4.8e-80
gi|126273216|ref|XP_001369506.1| PREDICTED: simila ( 252) 1289 301.7 5.1e-80
gi|21535780|emb|CAC82024.1| KCHIP2B protein [Mus m ( 252) 1288 301.5   6e-80
gi|21535782|emb|CAC82026.1| KCHIP2C protein [Mus m ( 234) 1286 301.0 7.7e-80
gi|16930771|gb|AAL32045.1|AF439340_1 Kv channel-in ( 252) 1286 301.0 8.2e-80
gi|126273220|ref|XP_001369562.1| PREDICTED: simila ( 220) 1285 300.7 8.6e-80


>>gi|12052963|emb|CAB66656.1| hypothetical protein [Homo  (225 aa)
 initn: 1522 init1: 1522 opt: 1522  Z-score: 1877.9  bits: 354.7 E(): 5.1e-96
Smith-Waterman score: 1522;  100.000% identity (100.000% similar) in 225 aa overlap (1-225:1-225)

               10        20        30        40        50        60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|120 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|120 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|120 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
              130       140       150       160       170       180

              190       200       210       220     
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
       :::::::::::::::::::::::::::::::::::::::::::::
gi|120 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
              190       200       210       220     

>>gi|62901948|gb|AAY18925.1| DKFZp566L1246 [synthetic co  (249 aa)
 initn: 1515 init1: 1515 opt: 1515  Z-score: 1868.7  bits: 353.1 E(): 1.7e-95
Smith-Waterman score: 1515;  100.000% identity (100.000% similar) in 224 aa overlap (2-225:26-249)

                                       10        20        30      
pF1KB8                         MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEF
                                :::::::::::::::::::::::::::::::::::
gi|629 MKHHHHHHHSDYDIPTTENLYFQGSNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEF
               10        20        30        40        50        60

         40        50        60        70        80        90      
pF1KB8 ESSTVCHRPEGLEQLQEQTKFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|629 ESSTVCHRPEGLEQLQEQTKFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDS
               70        80        90       100       110       120

        100       110       120       130       140       150      
pF1KB8 STYATFLFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|629 STYATFLFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEM
              130       140       150       160       170       180

        160       170       180       190       200       210      
pF1KB8 LDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|629 LDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMR
              190       200       210       220       230       240

        220     
pF1KB8 SMQLFDNVI
       :::::::::
gi|629 SMQLFDNVI
                

>>gi|73543412|gb|AAZ77800.1| potassium channel interacti  (225 aa)
 initn: 1504 init1: 1504 opt: 1504  Z-score: 1855.8  bits: 350.6 E(): 8.7e-95
Smith-Waterman score: 1504;  99.111% identity (99.111% similar) in 225 aa overlap (1-225:1-225)

               10        20        30        40        50        60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
       ::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
gi|735 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFELSTVCHRPEGLEQLQEQTKFTRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|735 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|735 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
              130       140       150       160       170       180

              190       200       210       220     
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
       :::::::::::::::::::: ::::::::::::::::::::::::
gi|735 REHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
              190       200       210       220     

>>gi|14041963|dbj|BAB55052.1| unnamed protein product [H  (225 aa)
 initn: 1498 init1: 1498 opt: 1498  Z-score: 1848.4  bits: 349.2 E(): 2.2e-94
Smith-Waterman score: 1498;  98.667% identity (98.667% similar) in 225 aa overlap (1-225:1-225)

               10        20        30        40        50        60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
       :::::::::::::::::::::::::::::: :::::: ::::::::::::::::::::::
gi|140 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDRVDDEFELSTVCHRPEGLEQLQEQTKFTRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|140 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|140 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
              130       140       150       160       170       180

              190       200       210       220     
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
       :::::::::::::::::::: ::::::::::::::::::::::::
gi|140 REHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
              190       200       210       220     

>>gi|109090367|ref|XP_001111683.1| PREDICTED: similar to  (225 aa)
 initn: 1494 init1: 1494 opt: 1494  Z-score: 1843.5  bits: 348.3 E(): 4.2e-94
Smith-Waterman score: 1494;  98.222% identity (99.111% similar) in 225 aa overlap (1-225:1-225)

               10        20        30        40        50        60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
       ::::::::::::::::::::::::::::::::.:::: ::::::::::::::::::::::
gi|109 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVEDEFELSTVCHRPEGLEQLQEQTKFTRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
              130       140       150       160       170       180

              190       200       210       220     
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
       :::::.:::::::::::::: ::::::::::::::::::::::::
gi|109 REHVENFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
              190       200       210       220     

>>gi|149689738|ref|XP_001499459.1| PREDICTED: similar to  (225 aa)
 initn: 1492 init1: 1492 opt: 1492  Z-score: 1841.0  bits: 347.9 E(): 5.8e-94
Smith-Waterman score: 1492;  97.778% identity (99.111% similar) in 225 aa overlap (1-225:1-225)

               10        20        30        40        50        60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
       ::::::::::::::::::::::::::::::::.:::: ::::::::::::::::::::::
gi|149 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVEDEFELSTVCHRPEGLEQLQEQTKFTRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
       :::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 VAGLSVILRGTIDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
              130       140       150       160       170       180

              190       200       210       220     
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
       :::::::::::::::::::: :::::::::::::::::.::::::
gi|149 REHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMKLFDNVI
              190       200       210       220     

>>gi|49781263|gb|AAT68467.1| KCHIP2 [Mus musculus]     g  (225 aa)
 initn: 1485 init1: 1485 opt: 1485  Z-score: 1832.4  bits: 346.3 E(): 1.7e-93
Smith-Waterman score: 1485;  96.889% identity (99.111% similar) in 225 aa overlap (1-225:1-225)

               10        20        30        40        50        60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
       ::::::::::::::::::::::::::::::::.:::: :::::::::::::::::::::.
gi|497 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVEDEFELSTVCHRPEGLEQLQEQTKFTRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
       :::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
gi|497 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSNYATFLFNAFDTNHDGSVSFEDF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
       :::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
gi|497 VAGLSVILRGTIDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
              130       140       150       160       170       180

              190       200       210       220     
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
       :::::::::::::::::::: ::::::::.:::::::::::::::
gi|497 REHVESFFQKMDRNKDGVVTIEEFIESCQQDENIMRSMQLFDNVI
              190       200       210       220     

>>gi|126273224|ref|XP_001369622.1| PREDICTED: similar to  (225 aa)
 initn: 1443 init1: 1443 opt: 1443  Z-score: 1780.8  bits: 336.7 E(): 1.3e-90
Smith-Waterman score: 1443;  93.778% identity (98.222% similar) in 225 aa overlap (1-225:1-225)

               10        20        30        40        50        60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
       :. ::: ::::::.:::::.:.:::.:.::::.:::: ::::::::::::::::::::::
gi|126 MSWCPRSCRSPLGHAARSLFQFVTGTLAPDSVEDEFELSTVCHRPEGLEQLQEQTKFTRK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
       :::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 VAGLSVILRGTIDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
              130       140       150       160       170       180

              190       200       210       220     
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
       :::::.:::::::::::::: :::::::::::::::::::::.::
gi|126 REHVENFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDDVI
              190       200       210       220     

>>gi|73621125|sp|Q9NS61|KCIP2_HUMAN Kv channel-interacti  (270 aa)
 initn: 1316 init1: 1316 opt: 1316  Z-score: 1623.4  bits: 307.9 E(): 7.6e-82
Smith-Waterman score: 1316;  98.492% identity (98.995% similar) in 199 aa overlap (27-225:72-270)

                   10        20        30        40        50      
pF1KB8     MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTK
                                     :.::::::::: ::::::::::::::::::
gi|736 LLPCCGPQVLPSVSETLAAPASLRPHRPRPLDPDSVDDEFELSTVCHRPEGLEQLQEQTK
              50        60        70        80        90       100 

         60        70        80        90       100       110      
pF1KB8 FTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|736 FTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVS
             110       120       130       140       150       160 

        120       130       140       150       160       170      
pF1KB8 FEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|736 FEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR
             170       180       190       200       210       220 

        180       190       200       210       220     
pF1KB8 EEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
       :::::::::::::::::::::::: ::::::::::::::::::::::::
gi|736 EEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
             230       240       250       260       270

>>gi|14091332|gb|AAK53710.1|AF367021_1 KCHIP2.4 [Homo sa  (270 aa)
 initn: 1316 init1: 1316 opt: 1316  Z-score: 1623.4  bits: 307.9 E(): 7.6e-82
Smith-Waterman score: 1316;  98.492% identity (98.995% similar) in 199 aa overlap (27-225:72-270)

                   10        20        30        40        50      
pF1KB8     MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTK
                                     :.::::::::: ::::::::::::::::::
gi|140 LLPCCGPQALPSVSETLAAPASLRPHRPRLLDPDSVDDEFELSTVCHRPEGLEQLQEQTK
              50        60        70        80        90       100 

         60        70        80        90       100       110      
pF1KB8 FTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|140 FTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVS
             110       120       130       140       150       160 

        120       130       140       150       160       170      
pF1KB8 FEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|140 FEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR
             170       180       190       200       210       220 

        180       190       200       210       220     
pF1KB8 EEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
       :::::::::::::::::::::::: ::::::::::::::::::::::::
gi|140 EEAPREHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
             230       240       250       260       270




225 residues in 1 query   sequences
2037593458 residues in 5938498 library sequences
 Tcomplib [34.26] (6 proc)
 start: Wed Mar  5 05:32:32 2008 done: Wed Mar  5 05:35:07 2008
 Total Scan time: 578.120 Total Display time:  0.030

Function used was FASTA [version 34.26.5 April 26, 2007]