Result of FASTA (ccds) for
pF1KB8243
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8243, 216 aa
1>>>pF1KB8243 216 - 216 aa - 216 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0147+/-0.000994; mu= 15.2945+/- 0.060
mean_var=82.2481+/-16.635, 0's: 0 Z-trim(106.4): 187 B-trim: 307 in 1/51
Lambda= 0.141420
statistics sampled from 8723 (8943) to 8723 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.275), width: 16
Scan time: 1.240
The best scores are: opt bits E(32554)
CCDS9271.1 RAN gene_id:5901|Hs108|chr12 ( 216) 1462 307.9 3.2e-84
CCDS73546.1 RAN gene_id:5901|Hs108|chr12 ( 128) 866 186.1 8.8e-48
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 359 82.8 1.7e-16
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 356 82.2 2.6e-16
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 ( 207) 352 81.4 4.6e-16
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 344 79.8 1.5e-15
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 344 79.8 1.5e-15
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 344 79.8 1.6e-15
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 343 79.6 1.7e-15
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 341 79.2 2.2e-15
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 339 78.7 2.9e-15
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 338 78.5 3.3e-15
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 337 78.3 3.9e-15
CCDS4962.1 RAB23 gene_id:51715|Hs108|chr6 ( 237) 337 78.4 4.2e-15
CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX ( 201) 336 78.1 4.3e-15
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 334 77.7 5.8e-15
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 334 77.7 6.1e-15
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX ( 201) 333 77.5 6.6e-15
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 332 77.3 7.6e-15
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 327 76.3 1.6e-14
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 326 76.1 1.9e-14
CCDS73011.1 RAB7B gene_id:338382|Hs108|chr1 ( 199) 322 75.2 3.1e-14
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 321 75.1 3.7e-14
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 320 74.9 4.3e-14
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 318 74.5 5.9e-14
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 ( 225) 315 73.9 9.2e-14
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 312 73.2 1.3e-13
CCDS3976.1 RAB3C gene_id:115827|Hs108|chr5 ( 227) 312 73.3 1.4e-13
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 310 72.8 1.8e-13
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 309 72.6 2e-13
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 309 72.6 2.1e-13
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 309 72.7 2.2e-13
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 308 72.4 2.3e-13
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 308 72.5 2.7e-13
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 306 72.0 3e-13
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 306 72.0 3.2e-13
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 306 72.0 3.2e-13
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 305 71.8 3.7e-13
CCDS46738.1 RABL2B gene_id:11158|Hs108|chr22 ( 238) 305 71.9 3.9e-13
CCDS77455.1 RABL2A gene_id:11159|Hs108|chr2 ( 238) 305 71.9 3.9e-13
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 303 71.4 4.9e-13
CCDS44803.1 CRACR2A gene_id:84766|Hs108|chr12 ( 731) 308 72.9 5.7e-13
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 301 71.0 6.4e-13
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 301 71.0 6.4e-13
CCDS5210.1 RAB32 gene_id:10981|Hs108|chr6 ( 225) 300 70.8 7.6e-13
CCDS33683.1 RABL2B gene_id:11158|Hs108|chr22 ( 229) 298 70.4 1e-12
CCDS77454.1 RABL2A gene_id:11159|Hs108|chr2 ( 229) 298 70.4 1e-12
CCDS14102.1 RABL2B gene_id:11158|Hs108|chr22 ( 228) 297 70.2 1.2e-12
CCDS2118.1 RABL2A gene_id:11159|Hs108|chr2 ( 228) 297 70.2 1.2e-12
CCDS560.1 RAB3B gene_id:5865|Hs108|chr1 ( 219) 296 70.0 1.3e-12
>>CCDS9271.1 RAN gene_id:5901|Hs108|chr12 (216 aa)
initn: 1462 init1: 1462 opt: 1462 Z-score: 1625.6 bits: 307.9 E(32554): 3.2e-84
Smith-Waterman score: 1462; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB8 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 GNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 GNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP
130 140 150 160 170 180
190 200 210
pF1KB8 ALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
::::::::::::::::::::::::::::::::::::
CCDS92 ALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
190 200 210
>>CCDS73546.1 RAN gene_id:5901|Hs108|chr12 (128 aa)
initn: 866 init1: 866 opt: 866 Z-score: 971.3 bits: 186.1 E(32554): 8.8e-48
Smith-Waterman score: 866; 100.0% identity (100.0% similar) in 128 aa overlap (89-216:1-128)
60 70 80 90 100 110
pF1KB8 IKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIV
::::::::::::::::::::::::::::::
CCDS73 MFDVTSRVTYKNVPNWHRDLVRVCENIPIV
10 20 30
120 130 140 150 160 170
pF1KB8 LCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVA
40 50 60 70 80 90
180 190 200 210
pF1KB8 MPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
::::::::::::::::::::::::::::::::::::::
CCDS73 MPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
100 110 120
>>CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 (203 aa)
initn: 339 init1: 256 opt: 359 Z-score: 409.7 bits: 82.8 E(32554): 1.7e-16
Smith-Waterman score: 359; 35.4% identity (66.5% similar) in 164 aa overlap (11-171:10-173)
10 20 30 40 50 60
pF1KB8 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK
::.::.:..:.::: .:.: : : ::.::. . . : .:
CCDS82 MSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVK
10 20 30 40 50
70 80 90 100 110
pF1KB8 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEN-IPIVL
...:::::::.: .. ..:: .:. :. .:.: . ... .:.: :.. . : . ::
CCDS82 LQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 CGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFV
:::.:. .:. . .. : . ... : . ::: . : :: :: :: .::..
CCDS82 VGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTL
120 130 140 150 160 170
180 190 200 210
pF1KB8 AMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
CCDS82 VNNVSSPLPGEGKSISYLTCCNFN
180 190 200
>>CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 (200 aa)
initn: 267 init1: 181 opt: 356 Z-score: 406.5 bits: 82.2 E(32554): 2.6e-16
Smith-Waterman score: 356; 34.3% identity (68.0% similar) in 175 aa overlap (11-177:10-184)
10 20 30 40 50 60
pF1KB8 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK
:::.:.::.:.::: . : :. ...:.:.. . . . . ::
CCDS17 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK
10 20 30 40 50
70 80 90 100 110
pF1KB8 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVL
...:::::::.: . .:: :. ....:.:. ...:. .: :.. .. :.. .:
CCDS17 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 CGNKVDIKDRKV--KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLA----RKL-IGDP
::: :. :..: :.:. . :........ :::.: :.:: :: :: :: . .:
CCDS17 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP
120 130 140 150 160 170
180 190 200 210
pF1KB8 NLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
: : :
CCDS17 NSENVDISSGGGVTGWKSKCC
180 190 200
>>CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 (207 aa)
initn: 318 init1: 191 opt: 352 Z-score: 401.9 bits: 81.4 E(32554): 4.6e-16
Smith-Waterman score: 352; 33.1% identity (70.5% similar) in 166 aa overlap (8-166:6-171)
10 20 30 40 50 60
pF1KB8 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK
.: .:....::.:.:::........ .: ..: ::.:.. .. .
CCDS30 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT
10 20 30 40 50
70 80 90 100 110
pF1KB8 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV-----RVCENI
...:::::::.: .: ..: :.: ...::::. :.:.. .:. ... : ::.
CCDS30 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 PIVLCGNKVDIKDRKVKAK--SIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPN
:.:. :::.:...:.: .: . . :.:. :.. ::: : :. : .::
CCDS30 PFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET
120 130 140 150 160 170
180 190 200 210
pF1KB8 LEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
CCDS30 EVELYNEFPEPIKLDKNDRAKASAESCSC
180 190 200
>>CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 (212 aa)
initn: 335 init1: 268 opt: 344 Z-score: 392.9 bits: 79.8 E(32554): 1.5e-15
Smith-Waterman score: 344; 37.8% identity (66.1% similar) in 180 aa overlap (5-172:9-187)
10 20 30 40 50
pF1KB8 MAAQGEPQVQ----FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVF
:.:. : ::::::::...::: :.: :: : .. .:.::. ..
CCDS33 MAGPGPGPGDPDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 HTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC
. . .:...:::::::.: . ..:: .:. ::. .:.:.: .. .::.: .:. .
CCDS33 EIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYA
70 80 90 100 110 120
120 130 140 150 160
pF1KB8 -ENIPIVLCGNKVDIKD-RKV---KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARK
:: .: ::: :... :.: .:.:.. : : . :::.. : :. :: .: .
CCDS33 GSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDI-LCAIETSAKDSSNVEEAFLRVATE
130 140 150 160 170
170 180 190 200 210
pF1KB8 LI---GDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
:: : :
CCDS33 LIMRHGGPLFSEKSPDHIQLNSKDIGEGWGCGC
180 190 200 210
>>CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 (216 aa)
initn: 298 init1: 258 opt: 344 Z-score: 392.8 bits: 79.8 E(32554): 1.5e-15
Smith-Waterman score: 344; 33.7% identity (67.5% similar) in 169 aa overlap (3-168:14-182)
10 20 30 40
pF1KB8 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHP
: :. ::::::.:....::...: : . :.:.. .:.:.
CCDS11 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB8 LVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV
. . .::..:::::::.. .: :: :: ::...:.:. :. . :: ..:
CCDS11 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB8 R-VCENIPIVLCGNKVDIKDRKVKA--KSIVFHRKKNLQYYDISAKSNYNFEKPFLWLAR
: . :: :.: :::.:. .... .. .. ..: ... :::. .: .. :. .:.
CCDS11 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
170 180 190 200 210
pF1KB8 KLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
::
CCDS11 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 (249 aa)
initn: 298 init1: 258 opt: 344 Z-score: 392.0 bits: 79.8 E(32554): 1.6e-15
Smith-Waterman score: 344; 33.7% identity (67.5% similar) in 169 aa overlap (3-168:47-215)
10 20 30
pF1KB8 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLT
: :. ::::::.:....::...: : .
CCDS58 STSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVK
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB8 GEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDV
:.:.. .:.:. . . .::..:::::::.. .: :: :: ::...:.
CCDS58 GQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDI
80 90 100 110 120 130
100 110 120 130 140
pF1KB8 TSRVTYKNVPNWHRDLVR-VCENIPIVLCGNKVDIKDRKVKA--KSIVFHRKKNLQYYDI
:. :. . :: ..: : . :: :.: :::.:. .... .. .. ..: ...
CCDS58 TNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMET
140 150 160 170 180 190
150 160 170 180 190 200
pF1KB8 SAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTAL
:::. .: .. :. .:.::
CCDS58 SAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
200 210 220 230 240
>>CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 (218 aa)
initn: 326 init1: 241 opt: 343 Z-score: 391.6 bits: 79.6 E(32554): 1.7e-15
Smith-Waterman score: 343; 34.6% identity (69.1% similar) in 162 aa overlap (11-169:14-175)
10 20 30 40 50
pF1KB8 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRG
::....:..::::. .... . .:. :.::: .....
CCDS31 MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 PIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIP
.:...:::::::.: .. .:: : :....:.::: ::. . :: : . . .::
CCDS31 YVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB8 IVLCGNKVDIK-DRKVK-AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNL
:.::::: :. ::.: .. : ....:.. . :: .. : :. :. :::..
CCDS31 IILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIES
130 140 150 160 170 180
180 190 200 210
pF1KB8 EFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
CCDS31 GELDPERMGSGIQYGDAALRQLRSPRRAQAPNAQECGC
190 200 210
>>CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 (215 aa)
initn: 344 init1: 255 opt: 341 Z-score: 389.5 bits: 79.2 E(32554): 2.2e-15
Smith-Waterman score: 341; 33.7% identity (68.6% similar) in 169 aa overlap (5-168:15-181)
10 20 30 40 50
pF1KB8 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPL
:. ::::::.:....::...: : . :.:.. .:.:.
CCDS26 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB8 VFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVR
. . .::..:::::::.. .: :: :: ::...:.:.. .. . :: ..: :
CCDS26 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
70 80 90 100 110 120
120 130 140 150 160
pF1KB8 -VCENIPIVLCGNKVDIKDRKV----KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLA
. :: :.: :::.:. .... .:.: . ..: ... :::...: .. :. .:
CCDS26 QASPNIVIALSGNKADLANKRAVDFQEAQS--YADDNSLLFMETSAKTSMNVNEIFMAIA
130 140 150 160 170
170 180 190 200 210
pF1KB8 RKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
.::
CCDS26 KKLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
180 190 200 210
216 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 10:55:37 2016 done: Fri Nov 4 10:55:37 2016
Total Scan time: 1.240 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]