Result of FASTA (omim) for pF1KB7213
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7213, 142 aa
  1>>>pF1KB7213 142 - 142 aa - 142 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6947+/-0.000322; mu= 14.8591+/- 0.020
 mean_var=70.6638+/-13.913, 0's: 0 Z-trim(117.1): 37  B-trim: 114 in 1/51
 Lambda= 0.152572
 statistics sampled from 28728 (28767) to 28728 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.337), width:  16
 Scan time:  4.160

The best scores are:                                      opt bits E(85289)
NP_001155201 (OMIM: 172411) phospholipase A2, memb ( 144)  487 115.5 2.9e-26
NP_001155199 (OMIM: 172411) phospholipase A2, memb ( 144)  487 115.5 2.9e-26
NP_001155200 (OMIM: 172411) phospholipase A2, memb ( 144)  487 115.5 2.9e-26
NP_000291 (OMIM: 172411) phospholipase A2, membran ( 144)  487 115.5 2.9e-26
XP_011539893 (OMIM: 228980,601192) PREDICTED: calc ( 138)  428 102.5 2.3e-22
XP_011539894 (OMIM: 228980,601192) PREDICTED: calc ( 138)  428 102.5 2.3e-22
XP_011539891 (OMIM: 228980,601192) PREDICTED: calc ( 138)  428 102.5 2.3e-22
NP_000920 (OMIM: 228980,601192) calcium-dependent  ( 138)  428 102.5 2.3e-22
XP_011539889 (OMIM: 228980,601192) PREDICTED: calc ( 138)  428 102.5 2.3e-22
XP_011539892 (OMIM: 228980,601192) PREDICTED: calc ( 138)  428 102.5 2.3e-22
XP_011539890 (OMIM: 228980,601192) PREDICTED: calc ( 138)  428 102.5 2.3e-22
XP_005245950 (OMIM: 228980,601192) PREDICTED: calc ( 138)  428 102.5 2.3e-22
XP_005245949 (OMIM: 228980,601192) PREDICTED: calc ( 169)  428 102.6 2.7e-22
XP_005245948 (OMIM: 228980,601192) PREDICTED: calc ( 169)  428 102.6 2.7e-22
XP_011539888 (OMIM: 228980,601192) PREDICTED: calc ( 169)  428 102.6 2.7e-22
NP_036532 (OMIM: 605630) group IID secretory phosp ( 145)  427 102.3 2.8e-22
NP_073730 (OMIM: 616793) group IIF secretory phosp ( 211)  422 101.4 7.9e-22
XP_011540258 (OMIM: 616793) PREDICTED: group IIF s ( 211)  422 101.4 7.9e-22
NP_003552 (OMIM: 603603) group 10 secretory phosph ( 165)  397 95.8   3e-20
NP_000919 (OMIM: 172410) phospholipase A2 precurso ( 148)  308 76.1 2.2e-14
XP_011540257 (OMIM: 616793) PREDICTED: group IIF s ( 219)  296 73.6 1.8e-13
XP_011521000 (OMIM: 603603) PREDICTED: group 10 se ( 120)  276 69.0 2.5e-12
XP_011520999 (OMIM: 603603) PREDICTED: group 10 se ( 124)  276 69.0 2.5e-12
XP_011520998 (OMIM: 603603) PREDICTED: group 10 se ( 131)  276 69.0 2.6e-12
XP_011520997 (OMIM: 603603) PREDICTED: group 10 se ( 133)  276 69.0 2.7e-12
NP_001073868 (OMIM: 601658) otoconin-90 precursor  ( 477)  277 69.8 5.7e-12
NP_001258743 (OMIM: 605630) group IID secretory ph (  62)  147 40.3 0.00054


>>NP_001155201 (OMIM: 172411) phospholipase A2, membrane  (144 aa)
 initn: 500 init1: 440 opt: 487  Z-score: 592.4  bits: 115.5 E(85289): 2.9e-26
Smith-Waterman score: 487; 53.6% identity (67.4% similar) in 138 aa overlap (6-142:9-144)

                  10        20        30         40        50      
pF1KB7    MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGK-SALQYNDYGCYCGIGGSHWPVD
               :.... :: :   ::::.:  ::.  ::: .::.:. :::.::.::   : :
NP_001 MKTLLLLAVIMIFGLLQA--HGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKD
               10          20        30        40        50        

         60        70        80        90       100       110      
pF1KB7 QTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCF
        :: :: .::::: :::: ::  :. .: :: :   : :: . .:.   ::::: :: ::
NP_001 ATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCF
       60        70        80        90       100       110        

        120       130       140  
pF1KB7 RRNLGTYNRKYAHYPNKLCTGPTPPC
        ::  :::.:: .: :: : : :: :
NP_001 ARNKTTYNKKYQYYSNKHCRGSTPRC
      120       130       140    

>>NP_001155199 (OMIM: 172411) phospholipase A2, membrane  (144 aa)
 initn: 500 init1: 440 opt: 487  Z-score: 592.4  bits: 115.5 E(85289): 2.9e-26
Smith-Waterman score: 487; 53.6% identity (67.4% similar) in 138 aa overlap (6-142:9-144)

                  10        20        30         40        50      
pF1KB7    MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGK-SALQYNDYGCYCGIGGSHWPVD
               :.... :: :   ::::.:  ::.  ::: .::.:. :::.::.::   : :
NP_001 MKTLLLLAVIMIFGLLQA--HGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKD
               10          20        30        40        50        

         60        70        80        90       100       110      
pF1KB7 QTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCF
        :: :: .::::: :::: ::  :. .: :: :   : :: . .:.   ::::: :: ::
NP_001 ATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCF
       60        70        80        90       100       110        

        120       130       140  
pF1KB7 RRNLGTYNRKYAHYPNKLCTGPTPPC
        ::  :::.:: .: :: : : :: :
NP_001 ARNKTTYNKKYQYYSNKHCRGSTPRC
      120       130       140    

>>NP_001155200 (OMIM: 172411) phospholipase A2, membrane  (144 aa)
 initn: 500 init1: 440 opt: 487  Z-score: 592.4  bits: 115.5 E(85289): 2.9e-26
Smith-Waterman score: 487; 53.6% identity (67.4% similar) in 138 aa overlap (6-142:9-144)

                  10        20        30         40        50      
pF1KB7    MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGK-SALQYNDYGCYCGIGGSHWPVD
               :.... :: :   ::::.:  ::.  ::: .::.:. :::.::.::   : :
NP_001 MKTLLLLAVIMIFGLLQA--HGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKD
               10          20        30        40        50        

         60        70        80        90       100       110      
pF1KB7 QTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCF
        :: :: .::::: :::: ::  :. .: :: :   : :: . .:.   ::::: :: ::
NP_001 ATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCF
       60        70        80        90       100       110        

        120       130       140  
pF1KB7 RRNLGTYNRKYAHYPNKLCTGPTPPC
        ::  :::.:: .: :: : : :: :
NP_001 ARNKTTYNKKYQYYSNKHCRGSTPRC
      120       130       140    

>>NP_000291 (OMIM: 172411) phospholipase A2, membrane as  (144 aa)
 initn: 500 init1: 440 opt: 487  Z-score: 592.4  bits: 115.5 E(85289): 2.9e-26
Smith-Waterman score: 487; 53.6% identity (67.4% similar) in 138 aa overlap (6-142:9-144)

                  10        20        30         40        50      
pF1KB7    MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGK-SALQYNDYGCYCGIGGSHWPVD
               :.... :: :   ::::.:  ::.  ::: .::.:. :::.::.::   : :
NP_000 MKTLLLLAVIMIFGLLQA--HGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKD
               10          20        30        40        50        

         60        70        80        90       100       110      
pF1KB7 QTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCF
        :: :: .::::: :::: ::  :. .: :: :   : :: . .:.   ::::: :: ::
NP_000 ATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCF
       60        70        80        90       100       110        

        120       130       140  
pF1KB7 RRNLGTYNRKYAHYPNKLCTGPTPPC
        ::  :::.:: .: :: : : :: :
NP_000 ARNKTTYNKKYQYYSNKHCRGSTPRC
      120       130       140    

>>XP_011539893 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 445 init1: 358 opt: 428  Z-score: 522.4  bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)

                10        20        30         40        50        
pF1KB7  MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
                ::   :  : :.:...  ::::.:::.:: .:. :::::: ::   : : :
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
       :::: ::: ::::::. ::. . ..: .  .   . :     :.   : ::.. . :..:
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

      120       130       140  
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
       :: .:: .: ..:: ::.      
XP_011 NLRSYNPQYQYFPNILCS      
              130              

>>XP_011539894 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 445 init1: 358 opt: 428  Z-score: 522.4  bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)

                10        20        30         40        50        
pF1KB7  MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
                ::   :  : :.:...  ::::.:::.:: .:. :::::: ::   : : :
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
       :::: ::: ::::::. ::. . ..: .  .   . :     :.   : ::.. . :..:
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

      120       130       140  
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
       :: .:: .: ..:: ::.      
XP_011 NLRSYNPQYQYFPNILCS      
              130              

>>XP_011539891 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 445 init1: 358 opt: 428  Z-score: 522.4  bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)

                10        20        30         40        50        
pF1KB7  MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
                ::   :  : :.:...  ::::.:::.:: .:. :::::: ::   : : :
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
       :::: ::: ::::::. ::. . ..: .  .   . :     :.   : ::.. . :..:
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

      120       130       140  
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
       :: .:: .: ..:: ::.      
XP_011 NLRSYNPQYQYFPNILCS      
              130              

>>NP_000920 (OMIM: 228980,601192) calcium-dependent phos  (138 aa)
 initn: 445 init1: 358 opt: 428  Z-score: 522.4  bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)

                10        20        30         40        50        
pF1KB7  MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
                ::   :  : :.:...  ::::.:::.:: .:. :::::: ::   : : :
NP_000 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
       :::: ::: ::::::. ::. . ..: .  .   . :     :.   : ::.. . :..:
NP_000 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

      120       130       140  
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
       :: .:: .: ..:: ::.      
NP_000 NLRSYNPQYQYFPNILCS      
              130              

>>XP_011539889 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 445 init1: 358 opt: 428  Z-score: 522.4  bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)

                10        20        30         40        50        
pF1KB7  MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
                ::   :  : :.:...  ::::.:::.:: .:. :::::: ::   : : :
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
       :::: ::: ::::::. ::. . ..: .  .   . :     :.   : ::.. . :..:
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

      120       130       140  
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
       :: .:: .: ..:: ::.      
XP_011 NLRSYNPQYQYFPNILCS      
              130              

>>XP_011539892 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 445 init1: 358 opt: 428  Z-score: 522.4  bits: 102.5 E(85289): 2.3e-22
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (9-136:10-138)

                10        20        30         40        50        
pF1KB7  MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
                ::   :  : :.:...  ::::.:::.:: .:. :::::: ::   : : :
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB7 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
       :::: ::: ::::::. ::. . ..: .  .   . :     :.   : ::.. . :..:
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

      120       130       140  
pF1KB7 NLGTYNRKYAHYPNKLCTGPTPPC
       :: .:: .: ..:: ::.      
XP_011 NLRSYNPQYQYFPNILCS      
              130              




142 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 06:01:16 2016 done: Fri Nov  4 06:01:17 2016
 Total Scan time:  4.160 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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