Result of FASTA (ccds) for pF1KB7212
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7212, 103 aa
  1>>>pF1KB7212 103 - 103 aa - 103 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6775+/-0.000771; mu= 13.4149+/- 0.047
 mean_var=64.1668+/-12.791, 0's: 0 Z-trim(108.8): 22  B-trim: 271 in 1/48
 Lambda= 0.160110
 statistics sampled from 10405 (10425) to 10405 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.715), E-opt: 0.2 (0.32), width:  16
 Scan time:  1.450

The best scores are:                                      opt bits E(32554)
CCDS4637.1 HIST1H4L gene_id:8368|Hs108|chr6        ( 103)  663 160.9 1.3e-40
CCDS4589.1 HIST1H4D gene_id:8360|Hs108|chr6        ( 103)  663 160.9 1.3e-40
CCDS4583.1 HIST1H4C gene_id:8364|Hs108|chr6        ( 103)  663 160.9 1.3e-40
CCDS30847.1 HIST2H4A gene_id:8370|Hs108|chr1       ( 103)  663 160.9 1.3e-40
CCDS4598.1 HIST1H4F gene_id:8361|Hs108|chr6        ( 103)  663 160.9 1.3e-40
CCDS8665.1 HIST4H4 gene_id:121504|Hs108|chr12      ( 103)  663 160.9 1.3e-40
CCDS4572.1 HIST1H4B gene_id:8366|Hs108|chr6        ( 103)  663 160.9 1.3e-40
CCDS30851.1 HIST2H4B gene_id:554313|Hs108|chr1     ( 103)  663 160.9 1.3e-40
CCDS4631.1 HIST1H4K gene_id:8362|Hs108|chr6        ( 103)  663 160.9 1.3e-40
CCDS4604.1 HIST1H4H gene_id:8365|Hs108|chr6        ( 103)  663 160.9 1.3e-40
CCDS4571.1 HIST1H4A gene_id:8359|Hs108|chr6        ( 103)  663 160.9 1.3e-40
CCDS4593.1 HIST1H4E gene_id:8367|Hs108|chr6        ( 103)  663 160.9 1.3e-40
CCDS4630.1 HIST1H4J gene_id:8363|Hs108|chr6        ( 103)  663 160.9 1.3e-40
CCDS4620.1 HIST1H4I gene_id:8294|Hs108|chr6        ( 103)  663 160.9 1.3e-40
CCDS4599.1 HIST1H4G gene_id:8369|Hs108|chr6        (  98)  489 120.7 1.5e-28


>>CCDS4637.1 HIST1H4L gene_id:8368|Hs108|chr6             (103 aa)
 initn: 663 init1: 663 opt: 663  Z-score: 842.7  bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
               10        20        30        40        50        60

               70        80        90       100   
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
       :::::::::::::::::::::::::::::::::::::::::::
CCDS46 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
               70        80        90       100   

>>CCDS4589.1 HIST1H4D gene_id:8360|Hs108|chr6             (103 aa)
 initn: 663 init1: 663 opt: 663  Z-score: 842.7  bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
               10        20        30        40        50        60

               70        80        90       100   
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
       :::::::::::::::::::::::::::::::::::::::::::
CCDS45 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
               70        80        90       100   

>>CCDS4583.1 HIST1H4C gene_id:8364|Hs108|chr6             (103 aa)
 initn: 663 init1: 663 opt: 663  Z-score: 842.7  bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
               10        20        30        40        50        60

               70        80        90       100   
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
       :::::::::::::::::::::::::::::::::::::::::::
CCDS45 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
               70        80        90       100   

>>CCDS30847.1 HIST2H4A gene_id:8370|Hs108|chr1            (103 aa)
 initn: 663 init1: 663 opt: 663  Z-score: 842.7  bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
               10        20        30        40        50        60

               70        80        90       100   
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
       :::::::::::::::::::::::::::::::::::::::::::
CCDS30 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
               70        80        90       100   

>>CCDS4598.1 HIST1H4F gene_id:8361|Hs108|chr6             (103 aa)
 initn: 663 init1: 663 opt: 663  Z-score: 842.7  bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
               10        20        30        40        50        60

               70        80        90       100   
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
       :::::::::::::::::::::::::::::::::::::::::::
CCDS45 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
               70        80        90       100   

>>CCDS8665.1 HIST4H4 gene_id:121504|Hs108|chr12           (103 aa)
 initn: 663 init1: 663 opt: 663  Z-score: 842.7  bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
               10        20        30        40        50        60

               70        80        90       100   
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
       :::::::::::::::::::::::::::::::::::::::::::
CCDS86 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
               70        80        90       100   

>>CCDS4572.1 HIST1H4B gene_id:8366|Hs108|chr6             (103 aa)
 initn: 663 init1: 663 opt: 663  Z-score: 842.7  bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
               10        20        30        40        50        60

               70        80        90       100   
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
       :::::::::::::::::::::::::::::::::::::::::::
CCDS45 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
               70        80        90       100   

>>CCDS30851.1 HIST2H4B gene_id:554313|Hs108|chr1          (103 aa)
 initn: 663 init1: 663 opt: 663  Z-score: 842.7  bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
               10        20        30        40        50        60

               70        80        90       100   
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
       :::::::::::::::::::::::::::::::::::::::::::
CCDS30 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
               70        80        90       100   

>>CCDS4631.1 HIST1H4K gene_id:8362|Hs108|chr6             (103 aa)
 initn: 663 init1: 663 opt: 663  Z-score: 842.7  bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
               10        20        30        40        50        60

               70        80        90       100   
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
       :::::::::::::::::::::::::::::::::::::::::::
CCDS46 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
               70        80        90       100   

>>CCDS4604.1 HIST1H4H gene_id:8365|Hs108|chr6             (103 aa)
 initn: 663 init1: 663 opt: 663  Z-score: 842.7  bits: 160.9 E(32554): 1.3e-40
Smith-Waterman score: 663; 100.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KB7 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
               10        20        30        40        50        60

               70        80        90       100   
pF1KB7 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
       :::::::::::::::::::::::::::::::::::::::::::
CCDS46 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
               70        80        90       100   




103 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 06:00:43 2016 done: Fri Nov  4 06:00:44 2016
 Total Scan time:  1.450 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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