Result of GENSCAN for pF1KB7207
GENSCAN 1.0	Date run:  4-Nov-116	Time: 05:58:43

Sequence gi568815593f:90385568_90612136 : 226569 bp : 37.36% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    492    487    6                               1.05
 1.07 Term -   1548   1448  101  1  2   29   32   126 0.083  -1.59
 1.06 Intr -  13982  13791  192  0  0   34  106   267 0.874  21.64
 1.05 Intr -  20232  20118  115  0  1   61   62   122 0.971   6.00
 1.04 Intr -  22267  22132  136  0  1   65   90   124 0.950   9.95
 1.03 Intr -  24596  24360  237  1  0   72   64   232 0.102  15.01
 1.02 Intr -  50653  50538  116  1  2   36   62    93 0.037  -0.17
 1.01 Init -  51482  51411   72  2  0   62   98    38 0.265   3.32
 1.00 Prom -  57937  57898   40                              -3.65

 2.03 PlyA -  62703  62698    6                               1.05
 2.02 Term -  75985  75600  386  2  2   84   35   296 0.778  17.97
 2.01 Init -  83042  83024   19  2  1   56   94    11 0.221  -1.26
 2.00 Prom -  84096  84057   40                              -4.55

 3.05 PlyA -  84375  84370    6                               1.05
 3.04 Term -  88989  88126  864  0  0  -19   48   546 0.241  31.61
 3.03 Intr -  89263  89140  124  0  1   69   43   102 0.215   3.47
 3.02 Intr -  89476  89389   88  2  1   54   28   106 0.361  -0.69
 3.01 Init -  91303  91228   76  1  1   98   78    76 0.580   8.90
 3.00 Prom -  93361  93322   40                              -9.55

 4.00 Prom +  93584  93623   40                              -8.35
 4.01 Init + 100001 100117  117  1  0   39   95    98 0.932   5.85
 4.02 Intr + 102433 102562  130  0  1   51   79   112 0.996   5.95
 4.03 Intr + 106490 106603  114  0  0   27   74   102 0.430   2.20
 4.04 Intr + 110110 110166   57  2  0  127   93    27 0.656   5.04
 4.05 Intr + 116342 116421   80  0  2   37   94    55 0.636  -0.65
 4.06 Intr + 120961 121107  147  0  0   31   80   334 0.933  26.41
 4.07 Term + 126486 126572   87  2  0   16   48   100 0.201  -4.52
 4.08 PlyA + 128234 128239    6                               1.05

 5.06 PlyA - 128309 128304    6                               1.05
 5.05 Term - 133917 133252  666  0  0  134   43   442 0.999  37.14
 5.04 Intr - 139733 139468  266  0  2  104  127   199 0.584  21.71
 5.03 Intr - 144054 143881  174  1  0   42  103   193 0.961  15.19
 5.02 Intr - 144464 144334  131  1  2   40   50    95 0.134   0.32
 5.01 Init - 149750 149710   41  2  2   54   77    70 0.198   2.21
 5.00 Prom - 168245 168206   40                              -2.35

 6.00 Prom + 172273 172312   40                              -2.75
 6.01 Init + 173009 173112  104  1  2   64   99    95 0.324   8.04
 6.02 Intr + 173229 173350  122  0  2   12   96    55 0.075  -2.08
 6.03 Intr + 190016 190353  338  0  2   93   88   132 0.012   8.01
 6.04 Term + 190698 190784   87  2  0   73   54    26 0.011  -5.62
 6.05 PlyA + 191142 191147    6                              -1.75

 7.08 PlyA - 191797 191792    6                               1.05
 7.07 Term - 194320 193498  823  0  1  -12   41   251 0.202   1.97
 7.06 Intr - 195239 194950  290  2  2   21   72   145 0.157   1.32
 7.05 Intr - 195614 195407  208  1  1   18   72   160 0.332   5.56
 7.04 Intr - 200466 200336  131  0  2   94  100   -20 0.051  -1.63
 7.03 Intr - 217159 217013  147  1  0  100   66    28 0.197   1.31
 7.02 Intr - 218445 218371   75  0  0   85   77    27 0.139   0.09
 7.01 Init - 224289 224164  126  0  0   52   91   108 0.840   7.71

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  24577  24360  218  1  2   67   64   222 0.834  15.92
S.002 Sngl +  58445  59152  708  1  0   86   49   149 0.826   6.78


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:90385568_90612136|GENSCAN_predicted_peptide_1|322_aa
MAVNDEKMYHTLGTKSYVWVWKLKGRPEVSGTLAQEKFSTSEEWEVKDNYPSQLPSPVMK
NPCRRVACSMSLPFPPPKLSIQFLNGGPQTARLYERGTQRPPAKQPHRDRRPDPQRIRGK
THRANPKGESGPRLGGRGGVRRSELVVDKTKRKKRRELSEEQKQEIKDAFELFDTDKDEA
IDYHELKVAMRALGFDVKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEIL
KAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGESSRDLQLYNRI
LDVLGSPGPLQCGKQLQKDSII

>gi568815593f:90385568_90612136|GENSCAN_predicted_CDS_1|969_bp
atggcagtgaatgatgagaaaatgtaccatacattaggcactaaatcttatgtctgggtg
tggaagttgaaggggaggccagaagtgtctgggacgcttgcccaggagaaattctcaacc
agcgaggaatgggaagttaaggataactacccttcccagcttcctagccctgtgatgaag
aatccctgccggagggtggcctgcagcatgtcccttcccttcccaccgccgaagctgtcc
atccagtttctgaatggcggcccacagaccgcacggctttacgagagaggaacacagcgc
ccacccgccaaacagccacacagggatcggaggccggacccgcaaaggattcggggaaaa
acgcatcgagccaatccgaagggcgagagcggccctagattgggggggcgggggggcgtt
aggagaagtgagcttgtagtggacaaaacaaagaggaaaaaaagaagagaactgtctgag
gaacagaaacaagaaattaaagatgcttttgaactatttgatacagacaaagatgaagca
atagattatcatgaattaaaggtggcaatgagagccttggggtttgatgtaaaaaaagct
gatgtactgaagattcttaaagattatgacagagaagccacagggaaaatcacctttgaa
gattttaatgaagttgtgacagactggatattggaaagagatccccatgaagaaatactc
aaggcatttaaactatttgatgatgatgattcaggtaaaataagcttgaggaatttgcga
cgtgttgctagagaattgggtgaaaacatgagtgatgaagaacttcgagctatgatagaa
gaatttgacaaagatggtgatggagaaagttcaagagatttgcagctctataatcggatc
ttggatgttctgggatctccgggacctctacagtgtgggaaacagttacaaaaagatagt
atcatctaa

>gi568815593f:90385568_90612136|GENSCAN_predicted_peptide_2|134_aa
MIQDMKGDVINLGDRQLTVMHMPGHSRGSICLHDKDRKILFSGDVVYDGSLIDWLPYSRI
SDYVGTCERLIELVDRGLVEKVLPGHFNTFGAERLFRLASNYISKAGICHKVSTFAMRSL
ASLALRVTNSRTSP

>gi568815593f:90385568_90612136|GENSCAN_predicted_CDS_2|405_bp
atgatacaagatatgaaaggggatgtgatcaaccttggtgacagacagctcactgttatg
cacatgccaggtcactccaggggcagtatttgcttacatgacaaagaccgaaagattctc
ttcagtggagacgtcgtgtatgatggatcactgattgactggctcccatacagcaggata
agtgactatgttggaacttgtgaacgtctaatagaattagtggacagaggtctggtagag
aaggtgcttcctgggcacttcaatacctttggtgctgaaaggctttttcgattggcttct
aactatatttcaaaagctgggatatgtcacaaagtttctacttttgccatgcgatctctt
gcaagtttagctctacgtgtaacaaattctaggacctcgccctag

>gi568815593f:90385568_90612136|GENSCAN_predicted_peptide_3|383_aa
MDAIVERVAEEVLSYLVIPEHKPDKIFDCFLGYLLPKSRSVGKTLQPKCRPARKGKAPPP
RQRGFFALGRRRSRRTTREAPHFLRQLGVRALQSQWLLRPRAGGAASACCRPGGRVRERT
LRAASVCVLPPPIPTPASHAPASLYASSLAAGRPLHTAAVPCVWTACGRLARPHSPRLAA
PLPSMSALEWYAHKSLGDGIFWIQERFYESGNRANIWLVRGSEQDVVIDTGLGLRSLPEY
LYSSGLLQDREAKEDAARRPLLAVATHVHFDHSGGLYQFDRVAVHHAEAEALARGDNFET
VTWLSDSEVVRTPSPGWRARQFRVQAVQPTLILQDGNGPPRARALVKGGYWEETVRVPHV
ADLRGHKGDYFGTSQSHFCFTLP

>gi568815593f:90385568_90612136|GENSCAN_predicted_CDS_3|1152_bp
atggatgctattgtggaaagggtggctgaagaagtcctctcttacttggtgatacctgag
cataagcctgacaaaatcttcgattgcttcctcggttacctgctccctaagtctcgaagc
gtgggcaaaactctgcagccgaagtgccggccggcaaggaaagggaaggccccaccccct
cggcaaagaggtttttttgcccttggcaggcgccgtagtcgccgtacaacccgcgaggcc
ccacactttctgcgccagctgggagtgcgcgccctgcagagccagtggctcctgcgcccc
cgtgctggtggcgcagcctctgcttgctgccgacctggcggaagggtgcgggagcgcacg
ctacgggcagcgtcggtctgcgtccttcctcctcctattccgacccccgcatcccacgcc
cccgcctcgctctacgcctcctccctggctgcaggcagaccgcttcacacagccgcagtg
ccctgtgtgtggacagcctgtgggagactcgcacgcccacactcaccccgcctggctgca
cccctgcccagcatgtcggcgctcgagtggtacgcccacaagtctctaggcgatggtatc
ttctggattcaagaacgtttctacgagtcgggcaaccgtgccaacatctggctggtgcgc
ggctccgagcaggacgtggtgatcgatacaggcctggggctgcgcagcctcccggagtac
ctgtactcctccggcctcttgcaggaccgagaggccaaagaggacgcggcgcgccggcca
ctgcttgccgtggccacccacgtgcacttcgaccactccggcggcctctaccagttcgac
cgcgtggcagtgcaccacgccgaggccgaggcgctggctcgcggggacaactttgagacc
gtgacctggctttccgatagcgaggtggtgcggacgcccagccccggctggagggccaga
cagttccgggtacaggcggtgcagcccaccctcatcctgcaggatggtaatgggcccccg
cgggcgcgcgctctcgttaagggagggtattgggaagagactgtccgagtgccgcatgtt
gcagacttgcgtggccataaaggggattattttggcacctcgcagagccacttctgtttc
acccttccctga

>gi568815593f:90385568_90612136|GENSCAN_predicted_peptide_4|243_aa
MAGNKGRGRAAYTFNIEAVGFSKGEKLPDVVLKPPPLFPDTDYKPVPLKTGEGEEYMLAL
KQELRETMKRMPYFIETPEERQEKHVPQFLDESEVKCKEIDSSLDAHDDDEIDCISKISD
YIERYSKRYMKVYKEEWIPGPKPKKAKDAGKGTPLTNTEDVLKKMEELEKRGDGEKSDEE
NEEKEGSKEKSKEGDDDDDDDAAEQEEYDEEEQEEENDYINSYFEDGDDFGADSDDNMDE
ATY

>gi568815593f:90385568_90612136|GENSCAN_predicted_CDS_4|732_bp
atggctgggaataaaggaagaggacgtgctgcttatacctttaatattgaggctgttgga
tttagcaaaggtgaaaagttacctgatgtagtgttgaaaccacccccactatttcctgat
acagattataaaccagtgccactgaaaacaggagaaggtgaagaatatatgctggctttg
aaacaggagttgagagaaacaatgaaaagaatgccttattttattgaaacacctgaagaa
agacaagaaaaacatgttccacaattcttagacgaatcagaagtcaaatgcaaagagata
gatagctctctggatgctcatgatgatgatgaaattgattgtataagcaaaatctcagac
tatattgaaaggtatagtaaaagatacatgaaggtatacaaggaagaatggataccaggc
ccaaaacccaaaaaggcaaaagacgcaggcaaaggcacaccactcactaatactgaagat
gtgttgaaaaaaatggaggaattggaaaaaagaggtgatggtgaaaaatcagatgaggaa
aatgaagagaaagaaggaagcaaagagaaaagtaaagaaggtgatgatgacgatgacgat
gatgccgcagaacaggaggaatatgatgaagaagagcaagaagaggaaaatgactacatt
aattcatactttgaagatggagatgattttggcgcagacagtgatgacaacatggatgag
gcaacctattag

>gi568815593f:90385568_90612136|GENSCAN_predicted_peptide_5|425_aa
MADIEKKVNKAHGRKFEMHSKKKMQDSSPTHPEPRLVLRVHPTVSASAVWTLDKDAASLR
TWRRRTARKAETLAAEAEADGVSPKQRLGHELTRDSGGGGPFGHLLAECSLLTGTDFNIM
AGRHQNRSFPLPGVQSSGQVHAFGNCSDSDILEEDAEVYELRSRGKEKVRRSTSRDRLDD
IIVLTKDIQEGDTLNAIALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKKFSSLTETL
CPPKGRQTSRHSSVQYSSEQQEILPANDSLAYSDSAGSFLKEVDRDIEQIVKCTDNKREN
LNEVVSALTAQQMRFEPDNKNTQRKDPYYGADWGIGWWTAVVIMLIVGIITPVFYLLYYE
ILAKVDVSHHSTVDSSHLHSKITPPSQQREMENGIVPTKGIHFSQQDDHKLYSQDSQSPA
AQQET

>gi568815593f:90385568_90612136|GENSCAN_predicted_CDS_5|1278_bp
atggcagatattgagaaaaaggtgaacaaggctcatgggagaaaattcgagatgcacagc
aagaaaaaaatgcaagacagctccccgacacatcctgagccacgcctcgtcctcagggtg
cacccgacagtctctgccagcgcagtgtggacgctggacaaagacgcagccagtttgcgg
acgtggcggcggcgtacggcccggaaggcggagacgttggcggcagaggcggaggcggac
ggggtcagcccaaagcagaggctcggccatgaacttacccgggacagcggcggcggcgga
ccttttggccatcttctcgcagagtgctccctgctaacggggacagattttaacattatg
gcagggaggcatcagaatcgtagttttcctcttccaggagttcagtcaagtggtcaagta
catgcatttggaaattgttcagacagtgatattttggaggaggatgctgaagtgtatgaa
cttcgatccagaggaaaagagaaagtccgaagaagtacatcaagagatagacttgacgac
attatagtattaacaaaagatatacaagaaggagatacattaaatgcaatagcccttcag
tactgttgtacggtagcagatatcaagagagttaacaatctcatcagtgatcaagacttt
tttgcccttaggtctatcaaaattccagtaaaaaagttcagttccttgaccgaaacactt
tgtcctccaaaaggaagacagacttcacgtcattcatctgttcaatactcttccgaacaa
caggaaattttgccagctaatgattctcttgcttacagtgactcagctggtagcttttta
aaagaagtagaccgagacatagaacaaatagtaaagtgtacagacaataagagagagaac
ctcaatgaggtagtatcggccttaacagcacaacaaatgcgttttgaacctgataacaaa
aacactcaacgtaaagacccctattatggagcagactggggaatagggtggtggacagct
gtagtgataatgttgatagtaggtataataacaccagtgttttatttgttgtattatgaa
attttagctaaggtggatgttagtcatcattcaacagtggactcttcacatttacattca
aaaatcacacccccatcacagcagagagaaatggaaaatggaattgtgccaactaaagga
atacatttcagccaacaagatgatcataaactgtatagtcaagattctcagtcacctgct
gctcaacaggaaacatag

>gi568815593f:90385568_90612136|GENSCAN_predicted_peptide_6|216_aa
MAKAGCSRRQSADLAARCGEQSAQPGAATPAPLVSGSKNQQRGQGVRTGVRGRARVCGGP
AGTAGSARMSVFLGPGVSPPMNGQRKLHPRPILSPRWLWGPALPQGFVYRPGNFDHERQT
PSNWRLTSGNCSDYSQRAYMGAGHPGEFSGMIQICLLGTEHHSPGSQCCLDSRKPVSAAP
GVPLGVAEPPAPRQAPVCDVPRCVSRCSHCSVPTYE

>gi568815593f:90385568_90612136|GENSCAN_predicted_CDS_6|651_bp
atggccaaggcagggtgttcccgacgccagagcgcggacctggctgcccgctgcggagag
cagagtgcgcagcccggggcggccacccccgctccgctggtcagtggtagtaagaatcag
cagcgcgggcaaggagtacggacgggagtcagaggcagagcgagggtgtgtggagggccg
gcggggaccgccgggagcgcgcggatgtcggtgttcctggggccaggggtttctcctccc
atgaatggacagcgaaagcttcatcctagaccaatcctgtctccacgatggctttgggga
cctgccttgccccagggttttgtctacaggcctggcaactttgaccatgagaggcagact
ccctctaactggaggctgacaagtggaaactgttcggattattcccagagggcttacatg
ggggcgggtcatcctggtgaattctcaggcatgatccaaatctgcctcctaggcacagaa
caccattctccagggtcgcagtgctgcctggactccaggaagccagtctctgctgctcct
ggtgtgcccctaggggtggccgagccccccgccccacgacaagccccagtgtgtgatgtt
ccccgctgtgtgtccaggtgttctcattgttcagttcccacctatgagtga

>gi568815593f:90385568_90612136|GENSCAN_predicted_peptide_7|599_aa
MGQGPEKTNITSAELNERIDLISFIFYLVNAIASIFPWCDHQTRVKEESKKFLISMSFRG
GKPVHKVLIFFFCSRITSRTPHYIGLSCFLGLLLAVTFPQSFLIFDDFGAFEECGQGLLQ
AGGLQLEKELLSIFSFCLSILFFLTRLANWFPIPTKDRARKLKKLEKRLDEWLTRINSVE
ETLNDLMELKNMAQELRDACTSFNSQFDQGEERITVIEDQINEIKWEDKETQRTPQRYSS
RRATPTHITVRFTKDEMKEKMLRAAREKGWVTHKGKSIGLTADLSAETLQARREWEPIFN
ILKEMNFQPRISYPAKLSEGESGKTRKIKRDKEGHYIMVKGSIQQEELTILNISAPNTGA
PGFIKQVLRDLQRDLDSHTIIMGDFNTPLSTLDRSTRQKVNKDIQDMNSALHQVDLIDIY
RTLHPKSTEYTFFSAPHHTYSKIDHIIGTKALLSKCKRTEITTNCLSDHSAIKLELGIKK
LTQNHTTTWKLNNLLLNDYWVNNKMKAEIKMFFETNENKDTTYQNLWDIRKAVCRGKFIA
LNAHKRKQGRSKIGTVTSQLKELEKQEQTHSKASRRQEITKIRAELKETETQNTLQKNQ

>gi568815593f:90385568_90612136|GENSCAN_predicted_CDS_7|1800_bp
atgggacaagggcctgaaaagacaaacattactagtgcagaattgaatgaacgcattgac
cttattagcttcatcttttaccttgtcaatgccatagcaagcatcttcccatggtgtgac
caccagactagggtcaaagaggaaagtaagaaatttcttatctccatgtcattcagaggc
ggaaaaccagttcacaaggtgctaattttctttttctgttccaggatcacatccaggaca
ccacattacattgggttgtcatgtttccttgggctccttttggctgtgacatttcctcag
agttttcttatttttgatgactttggcgcttttgaggaatgtggtcagggactgctgcaa
gctggtggcttacagctggagaaagagttattgtccatcttttctttttgcctgtcgata
cttttcttcctcactcggctggccaactggtttcccatccccactaaggacagagcaagg
aagctaaaaaaacttgaaaaaaggttagacgaatggctaactagaataaacagtgtagag
gagactttaaatgacctgatggagctgaaaaacatggcacaagaacttcgtgacgcatgc
acaagcttcaatagccaattcgatcaaggggaagaaaggataacagtgattgaagatcaa
attaatgaaataaagtgggaagacaaggaaacacagagaacaccacaaagatactcctcc
agaagagcaaccccaacacacataactgtcagattcaccaaggatgaaatgaaggaaaaa
atgttaagggcagccagagagaaaggttgggttacccacaaagggaagtccatcggacta
acagcggatctctcggcagaaaccctacaagccagaagagagtgggagccaatattcaac
attcttaaagaaatgaattttcaacccagaatctcatatccagccaaactaagtgaagga
gaaagcgggaagacaagaaagatcaaaagagacaaagaaggccattacataatggtaaag
ggatcaattcaacaagaagaactaactatactaaatatatctgcacccaatacaggagca
cccggattcataaagcaagtccttagagacctacaaagagacttagactcccacacaata
ataatgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaggtt
aacaaggatatccaggacatgaactcagctctgcaccaagtggacctaatagacatctac
agaactctccaccccaaatcaacagaatatacattcttctcagcaccacatcacacttat
tctaaaattgaccacataattggaaccaaagcactcctcagcaaatgtaaaagaacagaa
atcacaacaaactgtctctcagaccacagtgcaatcaaattagaacttgggattaagaaa
ctcactcaaaaccacacaactacatggaaactgaacaacctgctcctgaatgactactgg
gtaaataacaaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagac
acaacataccagaatctctgggacatacgtaaagcagtgtgtagagggaaatttatagca
ctaaatgcccacaagagaaagcagggaagatctaaaatcggcaccgtaacatcacaatta
aaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataact
aagatcagagcagaactgaaggagacagagacacaaaacacccttcaaaaaaatcaatga
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