Result of FASTA (omim) for pF1KB3403
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3403, 255 aa
  1>>>pF1KB3403 255 - 255 aa - 255 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3892+/-0.000405; mu= 14.6883+/- 0.025
 mean_var=66.4871+/-13.035, 0's: 0 Z-trim(111.7): 31  B-trim: 0 in 0/49
 Lambda= 0.157292
 statistics sampled from 20341 (20370) to 20341 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.601), E-opt: 0.2 (0.239), width:  16
 Scan time:  6.580

The best scores are:                                      opt bits E(85289)
NP_002779 (OMIM: 176843) proteasome subunit alpha  ( 255) 1662 385.9 3.7e-107
NP_687033 (OMIM: 176843) proteasome subunit alpha  ( 248) 1592 370.0 2.2e-102
NP_002781 (OMIM: 176844) proteasome subunit alpha  ( 241)  426 105.4 9.6e-23
NP_002783 (OMIM: 606607) proteasome subunit alpha  ( 248)  420 104.1 2.5e-22
NP_002782 (OMIM: 602855,608446) proteasome subunit ( 246)  391 97.5 2.4e-20
NP_002778 (OMIM: 176842) proteasome subunit alpha  ( 234)  386 96.4   5e-20
NP_001317605 (OMIM: 176846) proteasome subunit alp ( 261)  370 92.7 6.8e-19
NP_002780 (OMIM: 176846) proteasome subunit alpha  ( 261)  370 92.7 6.8e-19
NP_001096137 (OMIM: 176846) proteasome subunit alp ( 261)  370 92.7 6.8e-19
NP_002777 (OMIM: 602854) proteasome subunit alpha  ( 263)  332 84.1 2.7e-16
NP_683877 (OMIM: 602854) proteasome subunit alpha  ( 269)  332 84.1 2.8e-16
NP_001317602 (OMIM: 176846) proteasome subunit alp ( 174)  320 81.3 1.3e-15
NP_001269163 (OMIM: 602855,608446) proteasome subu ( 227)  318 80.9 2.2e-15
NP_001137409 (OMIM: 602854) proteasome subunit alp ( 130)  248 64.9 8.2e-11
NP_001186702 (OMIM: 176844) proteasome subunit alp ( 183)  244 64.1   2e-10
NP_001186701 (OMIM: 176844) proteasome subunit alp ( 183)  244 64.1   2e-10
NP_001186703 (OMIM: 176844) proteasome subunit alp ( 183)  244 64.1   2e-10
NP_001317604 (OMIM: 176846) proteasome subunit alp ( 230)  227 60.3 3.6e-09
NP_001269162 (OMIM: 602855,608446) proteasome subu ( 167)  224 59.5 4.4e-09
NP_001269161 (OMIM: 602855,608446) proteasome subu ( 167)  224 59.5 4.4e-09
XP_016876957 (OMIM: 602855,608446) PREDICTED: prot ( 167)  224 59.5 4.4e-09
NP_001096138 (OMIM: 176846) proteasome subunit alp ( 190)  212 56.8 3.2e-08


>>NP_002779 (OMIM: 176843) proteasome subunit alpha type  (255 aa)
 initn: 1662 init1: 1662 opt: 1662  Z-score: 2044.8  bits: 385.9 E(85289): 3.7e-107
Smith-Waterman score: 1662; 100.0% identity (100.0% similar) in 255 aa overlap (1-255:1-255)

               10        20        30        40        50        60
pF1KB3 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 HAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 HAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 QMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREEAEKYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREEAEKYA
              190       200       210       220       230       240

              250     
pF1KB3 KESLKEEDESDDDNM
       :::::::::::::::
NP_002 KESLKEEDESDDDNM
              250     

>>NP_687033 (OMIM: 176843) proteasome subunit alpha type  (248 aa)
 initn: 872 init1: 872 opt: 1592  Z-score: 1959.1  bits: 370.0 E(85289): 2.2e-102
Smith-Waterman score: 1592; 97.3% identity (97.3% similar) in 255 aa overlap (1-255:1-248)

               10        20        30        40        50        60
pF1KB3 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_687 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_687 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 HAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKL
       :::::::::::::::       ::::::::::::::::::::::::::::::::::::::
NP_687 HAYTLYSAVRPFGCS-------VNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKL
              130              140       150       160       170   

              190       200       210       220       230       240
pF1KB3 QMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREEAEKYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_687 QMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREEAEKYA
           180       190       200       210       220       230   

              250     
pF1KB3 KESLKEEDESDDDNM
       :::::::::::::::
NP_687 KESLKEEDESDDDNM
           240        

>>NP_002781 (OMIM: 176844) proteasome subunit alpha type  (241 aa)
 initn: 415 init1: 302 opt: 426  Z-score: 529.3  bits: 105.4 E(85289): 9.6e-23
Smith-Waterman score: 426; 34.1% identity (68.5% similar) in 232 aa overlap (8-234:8-236)

               10        20        30        40        50        60
pF1KB3 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE
              :: ...::::.::.::::::..:.. .::::::. ..:: ..::: . : :.:
NP_002 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV
        .: ... ..: :.: :..::.:::..: : :: :..:   ... .. .. ... :.  .
NP_002 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA
               70        80        90       100       110       120

                   130       140       150       160       170     
pF1KB3 HAYTLYSA-----VRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKT
         .   .:      :::: ....:. . . : ::. .::::.     . :::.: ..:..
NP_002 LQFGEEDADPGAMSRPFGVALLFGGVD-EKGPQLFHMDPSGTFVQCDARAIGSASEGAQS
              130       140        150       160       170         

         180       190       200       210       220       230     
pF1KB3 EIEKLQMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREE
        ....  : :: .. .:    :.  : .: : .: ..::. :    :  : .. ....: 
NP_002 SLQEVYHKSMTLKEAIKSSLIILKQVMEE-KLNATNIELATVQPGQN-FHMFTKEELEEV
     180       190       200        210       220        230       

         240       250     
pF1KB3 AEKYAKESLKEEDESDDDNM
                           
NP_002 IKDI                
       240                 

>>NP_002783 (OMIM: 606607) proteasome subunit alpha type  (248 aa)
 initn: 434 init1: 394 opt: 420  Z-score: 521.8  bits: 104.1 E(85289): 2.5e-22
Smith-Waterman score: 420; 33.2% identity (65.6% similar) in 244 aa overlap (8-251:3-240)

               10        20        30        40        50        60
pF1KB3 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE
              :: . ..:::::..::::::..::...:::.:.: .: ::.::::  ..:: .
NP_002      MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQD
                    10        20        30        40        50     

               70        80        90       100       110       120
pF1KB3 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV
       : . ...  .: .: :: ::: :::: . . :: : .. : .    . .....  .:   
NP_002 ERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLK
          60        70        80        90       100       110     

              130       140       150       160       170       180
pF1KB3 HAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKL
       . ::  .. :::: : .. ... .   .::. ::::. ... . :::.. ....  .:: 
NP_002 QRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKN
         120       130       140       150       160       170     

              190       200       210       220       230       240
pF1KB3 QMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREEAEKYA
          :    : .  .  .:  . . :.. . ..::. : .  .. . . :    :: :::.
NP_002 YTDEAIETDDLT-IKLVIKALLEVVQSGGKNIELA-VMRRDQSLKILNP----EEIEKYV
         180        190       200        210       220             

              250         
pF1KB3 KESLKEEDESDDDNM    
        :  ::..:..        
NP_002 AEIEKEKEENEKKKQKKAS
     230       240        

>>NP_002782 (OMIM: 602855,608446) proteasome subunit alp  (246 aa)
 initn: 373 init1: 296 opt: 391  Z-score: 486.3  bits: 97.5 E(85289): 2.4e-20
Smith-Waterman score: 391; 35.1% identity (71.3% similar) in 174 aa overlap (7-179:8-181)

                10        20        30         40        50        
pF1KB3  MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKL
              :.:   . :::.::..:::::.::..... :....: :: .:. ..: : .::
NP_002 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB3 YEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAM
        . ..  .::.. ...: ...:. ::.:: .. :: ::.:.. ..::.::.  :  :.: 
NP_002 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
               70        80        90       100       110       120

      120       130       140       150       160       170        
pF1KB3 YVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIE
         ..::  . .::.:: ..: . . ..: :.:  ::.:   :. . : :  .  . . .:
NP_002 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
              130       140       150       160       170       180

      180       190       200       210       220       230        
pF1KB3 KLQMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREEAEK
       :                                                           
NP_002 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
              190       200       210       220       230       240

>>NP_002778 (OMIM: 176842) proteasome subunit alpha type  (234 aa)
 initn: 383 init1: 315 opt: 386  Z-score: 480.5  bits: 96.4 E(85289): 5e-20
Smith-Waterman score: 386; 30.3% identity (65.8% similar) in 231 aa overlap (7-234:5-228)

               10        20        30        40        50        60
pF1KB3 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE
             ::..: .::::.:.. :.:::. :: ... ..::.  .:::...::   : ::.
NP_002   MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYD
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KB3 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV
       : : ...  . .:.:.. .:.  : : :.  ::. :...   .   ::  .:..:::  .
NP_002 ERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVM
       60        70        80        90       100       110        

              130       140        150       160       170         
pF1KB3 HAYTLYSAVRPFGCSFMLGSYSVNDG-AQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEK
       . ::  ..::::: :... ..  :.:   :.. ::::. ... . :.::    .:: .::
NP_002 QEYTQSGGVRPFGVSLLICGW--NEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEK
      120       130         140       150       160       170      

     180       190       200       210         220       230       
pF1KB3 LQMKEMTCRDIVKEVAKIIYIVHDEVKDKAFE--LELSWVGELTNGRHEIVPKDIREEAE
          ...  .: .. .   :  ...  . .  :  .:..  .:   : ....: ....   
NP_002 RYNEDLELEDAIHTA---ILTLKESFEGQMTEDNIEVGICNE--AGFRRLTPTEVKDYLA
        180       190          200       210         220       230 

       240       250     
pF1KB3 KYAKESLKEEDESDDDNM
                         
NP_002 AIA               
                         

>>NP_001317605 (OMIM: 176846) proteasome subunit alpha t  (261 aa)
 initn: 352 init1: 176 opt: 370  Z-score: 460.1  bits: 92.7 E(85289): 6.8e-19
Smith-Waterman score: 370; 29.9% identity (64.1% similar) in 251 aa overlap (8-252:5-253)

               10        20        30        40        50        60
pF1KB3 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE
              ::  .. :::.::..::::::.:. ...: .::  .:::....:.  . :: .
NP_001    MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLD
                  10        20        30        40        50       

                70        80        90       100       110         
pF1KB3 EGS-NKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMY
       :   ......... .. .:::. .::  :..  :  :. .  ..   :: ..:.  .   
NP_001 EVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDI
        60        70        80        90       100       110       

     120       130       140       150       160        170        
pF1KB3 VHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYW-GCAIGKARQAAKTEIE
        .::: ... :::: :..  ... . : :::. :::: .:: : .  ::.   :: . ..
NP_001 KQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSG-NYGGWKATCIGNNSAAAVSMLK
       120       130       140       150        160       170      

       180       190       200       210       220          230    
pF1KB3 K-LQMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIV---PKDIRE
       .  .  ::: .. .  . :..  . :  : .: ..:.. . .  ::.  :     :....
NP_001 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTR-ENGKTVIRVLKQKEVEQ
        180       190       200       210        220       230     

          240       250          
pF1KB3 EAEKYAKESLKEEDESDDDNM     
         .:. .:  : : :. .        
NP_001 LIKKHEEEEAKAEREKKEKEQKEKDK
         240       250       260 

>>NP_002780 (OMIM: 176846) proteasome subunit alpha type  (261 aa)
 initn: 352 init1: 176 opt: 370  Z-score: 460.1  bits: 92.7 E(85289): 6.8e-19
Smith-Waterman score: 370; 29.9% identity (64.1% similar) in 251 aa overlap (8-252:5-253)

               10        20        30        40        50        60
pF1KB3 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE
              ::  .. :::.::..::::::.:. ...: .::  .:::....:.  . :: .
NP_002    MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLD
                  10        20        30        40        50       

                70        80        90       100       110         
pF1KB3 EGS-NKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMY
       :   ......... .. .:::. .::  :..  :  :. .  ..   :: ..:.  .   
NP_002 EVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDI
        60        70        80        90       100       110       

     120       130       140       150       160        170        
pF1KB3 VHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYW-GCAIGKARQAAKTEIE
        .::: ... :::: :..  ... . : :::. :::: .:: : .  ::.   :: . ..
NP_002 KQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSG-NYGGWKATCIGNNSAAAVSMLK
       120       130       140       150        160       170      

       180       190       200       210       220          230    
pF1KB3 K-LQMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIV---PKDIRE
       .  .  ::: .. .  . :..  . :  : .: ..:.. . .  ::.  :     :....
NP_002 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTR-ENGKTVIRVLKQKEVEQ
        180       190       200       210        220       230     

          240       250          
pF1KB3 EAEKYAKESLKEEDESDDDNM     
         .:. .:  : : :. .        
NP_002 LIKKHEEEEAKAEREKKEKEQKEKDK
         240       250       260 

>>NP_001096137 (OMIM: 176846) proteasome subunit alpha t  (261 aa)
 initn: 352 init1: 176 opt: 370  Z-score: 460.1  bits: 92.7 E(85289): 6.8e-19
Smith-Waterman score: 370; 29.9% identity (64.1% similar) in 251 aa overlap (8-252:5-253)

               10        20        30        40        50        60
pF1KB3 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE
              ::  .. :::.::..::::::.:. ...: .::  .:::....:.  . :: .
NP_001    MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLD
                  10        20        30        40        50       

                70        80        90       100       110         
pF1KB3 EGS-NKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMY
       :   ......... .. .:::. .::  :..  :  :. .  ..   :: ..:.  .   
NP_001 EVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDI
        60        70        80        90       100       110       

     120       130       140       150       160        170        
pF1KB3 VHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYW-GCAIGKARQAAKTEIE
        .::: ... :::: :..  ... . : :::. :::: .:: : .  ::.   :: . ..
NP_001 KQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSG-NYGGWKATCIGNNSAAAVSMLK
       120       130       140       150        160       170      

       180       190       200       210       220          230    
pF1KB3 K-LQMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIV---PKDIRE
       .  .  ::: .. .  . :..  . :  : .: ..:.. . .  ::.  :     :....
NP_001 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTR-ENGKTVIRVLKQKEVEQ
        180       190       200       210        220       230     

          240       250          
pF1KB3 EAEKYAKESLKEEDESDDDNM     
         .:. .:  : : :. .        
NP_001 LIKKHEEEEAKAEREKKEKEQKEKDK
         240       250       260 

>>NP_002777 (OMIM: 602854) proteasome subunit alpha type  (263 aa)
 initn: 281 init1: 151 opt: 332  Z-score: 413.5  bits: 84.1 E(85289): 2.7e-16
Smith-Waterman score: 332; 30.6% identity (69.4% similar) in 180 aa overlap (8-187:6-182)

               10        20        30        40        50        60
pF1KB3 MSSIGTGYDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYE
              :: .....::.::. :.::::.::...:...:.. :  .:. . : . :.:  
NP_002   MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL--
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KB3 EGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYV
        . .:....:: :.:...::: :::: : .. :.:  . :  :   .:...:.. ..  .
NP_002 AAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKT
         60        70        80        90       100       110      

              130       140       150       160       170       180
pF1KB3 HAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKL
       .  :   . ::.: ......:. . : ....  ::.  .   . .::   :.:.: .:. 
NP_002 QIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERH
        120       130        140       150       160       170     

              190       200       210       220       230       240
pF1KB3 QMKEMTCRDIVKEVAKIIYIVHDEVKDKAFELELSWVGELTNGRHEIVPKDIREEAEKYA
       . . : :                                                     
NP_002 MSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEG
         180       190       200       210       220       230     




255 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 02:19:09 2016 done: Fri Nov  4 02:19:10 2016
 Total Scan time:  6.580 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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