Result of FASTA (omim) for pF1KA1408
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1408, 1272 aa
  1>>>pF1KA1408 1272 - 1272 aa - 1272 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.8172+/-0.000621; mu= -12.8581+/- 0.039
 mean_var=507.0263+/-102.678, 0's: 0 Z-trim(119.3): 10  B-trim: 1105 in 1/55
 Lambda= 0.056959
 statistics sampled from 33235 (33245) to 33235 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.39), width:  16
 Scan time: 18.520

The best scores are:                                      opt bits E(85289)
NP_056357 (OMIM: 605529) regulator of nonsense tra (1272) 8439 709.8 2.9e-203
NP_542166 (OMIM: 605529) regulator of nonsense tra (1272) 8439 709.8 2.9e-203
XP_016871523 (OMIM: 605529) PREDICTED: regulator o ( 869) 5825 494.9  1e-138
XP_011517751 (OMIM: 605529) PREDICTED: regulator o ( 718) 4517 387.3  2e-106


>>NP_056357 (OMIM: 605529) regulator of nonsense transcr  (1272 aa)
 initn: 8439 init1: 8439 opt: 8439  Z-score: 3770.2  bits: 709.8 E(85289): 2.9e-203
Smith-Waterman score: 8439; 100.0% identity (100.0% similar) in 1272 aa overlap (1-1272:1-1272)

               10        20        30        40        50        60
pF1KA1 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA1 KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA1 VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA1 VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA1 VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA1 DSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLT
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA1 DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KA1 AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KA1 QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
             1210      1220      1230      1240      1250      1260

             1270  
pF1KA1 ADLIFKTGGRRR
       ::::::::::::
NP_056 ADLIFKTGGRRR
             1270  

>>NP_542166 (OMIM: 605529) regulator of nonsense transcr  (1272 aa)
 initn: 8439 init1: 8439 opt: 8439  Z-score: 3770.2  bits: 709.8 E(85289): 2.9e-203
Smith-Waterman score: 8439; 100.0% identity (100.0% similar) in 1272 aa overlap (1-1272:1-1272)

               10        20        30        40        50        60
pF1KA1 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLY
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA1 KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA1 VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA1 VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA1 VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA1 DSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 DSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLT
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA1 DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KA1 AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KA1 QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_542 QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
             1210      1220      1230      1240      1250      1260

             1270  
pF1KA1 ADLIFKTGGRRR
       ::::::::::::
NP_542 ADLIFKTGGRRR
             1270  

>>XP_016871523 (OMIM: 605529) PREDICTED: regulator of no  (869 aa)
 initn: 5825 init1: 5825 opt: 5825  Z-score: 2611.4  bits: 494.9 E(85289): 1e-138
Smith-Waterman score: 5825; 100.0% identity (100.0% similar) in 869 aa overlap (404-1272:1-869)

           380       390       400       410       420       430   
pF1KA1 LQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPT
                                     ::::::::::::::::::::::::::::::
XP_016                               MSYQKLLANSQSLADLLDENMPDLPQDKPT
                                             10        20        30

           440       450       460       470       480       490   
pF1KA1 PEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSCQNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSCQNK
               40        50        60        70        80        90

           500       510       520       530       540       550   
pF1KA1 ESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEAEDLTKKLLDEQEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEAEDLTKKLLDEQEQ
              100       110       120       130       140       150

           560       570       580       590       600       610   
pF1KA1 EDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIVPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIVPR
              160       170       180       190       200       210

           620       630       640       650       660       670   
pF1KA1 QRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGEL
              220       230       240       250       260       270

           680       690       700       710       720       730   
pF1KA1 TKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMR
              280       290       300       310       320       330

           740       750       760       770       780       790   
pF1KA1 KKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLR
              340       350       360       370       380       390

           800       810       820       830       840       850   
pF1KA1 QMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDI
              400       410       420       430       440       450

           860       870       880       890       900       910   
pF1KA1 RLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPP
              460       470       480       490       500       510

           920       930       940       950       960       970   
pF1KA1 EHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDID
              520       530       540       550       560       570

           980       990      1000      1010      1020      1030   
pF1KA1 YMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSKDSMTEGENLEEDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSKDSMTEGENLEEDE
              580       590       600       610       620       630

          1040      1050      1060      1070      1080      1090   
pF1KA1 EEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTDSNKENETDEENT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTDSNKENETDEENT
              640       650       660       670       680       690

          1100      1110      1120      1130      1140      1150   
pF1KA1 EVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKG
              700       710       720       730       740       750

          1160      1170      1180      1190      1200      1210   
pF1KA1 PPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMK
              760       770       780       790       800       810

          1220      1230      1240      1250      1260      1270  
pF1KA1 KLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR
              820       830       840       850       860         

>>XP_011517751 (OMIM: 605529) PREDICTED: regulator of no  (718 aa)
 initn: 4517 init1: 4517 opt: 4517  Z-score: 2031.6  bits: 387.3 E(85289): 2e-106
Smith-Waterman score: 4517; 100.0% identity (100.0% similar) in 689 aa overlap (1-689:1-689)

               10        20        30        40        50        60
pF1KA1 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKEKEESIQLHQEAWERHHLRKELRSKNQNAPDSRPEENFFSRLDSSLKKNTAFVKKLKT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ITEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILFKDNEKSCQNKESNKDDTKEAKESKENKEVSSPDDLELELENLEINDDTLELEGGDEA
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
       :::::::::::::::::::::::::::::                               
XP_011 ETKNKTVRFIGELTKFKMFTKNDTLHCLKKIGNPKHFWSQAFQIRDTSPVARNGRQLG  
              670       680       690       700       710          




1272 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 01:33:35 2016 done: Fri Nov  4 01:33:38 2016
 Total Scan time: 18.520 Total Display time:  0.150

Function used was FASTA [36.3.4 Apr, 2011]
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