Result of FASTA (ccds) for pF1KA0044
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0044, 475 aa
  1>>>pF1KA0044 475 - 475 aa - 475 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3382+/-0.000888; mu= 18.9447+/- 0.054
 mean_var=79.5267+/-16.054, 0's: 0 Z-trim(106.8): 17  B-trim: 15 in 2/51
 Lambda= 0.143819
 statistics sampled from 9192 (9207) to 9192 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.652), E-opt: 0.2 (0.283), width:  16
 Scan time:  2.960

The best scores are:                                      opt bits E(32554)
CCDS9965.1 PPP2R5C gene_id:5527|Hs108|chr14        ( 485) 3183 670.1 1.4e-192
CCDS53911.1 PPP2R5C gene_id:5527|Hs108|chr14       ( 540) 3053 643.2  2e-184
CCDS45163.1 PPP2R5C gene_id:5527|Hs108|chr14       ( 449) 2891 609.5 2.3e-174
CCDS9964.1 PPP2R5C gene_id:5527|Hs108|chr14        ( 524) 2887 608.7 4.6e-174
CCDS53912.1 PPP2R5C gene_id:5527|Hs108|chr14       ( 555) 2758 582.0 5.5e-166
CCDS4878.1 PPP2R5D gene_id:5528|Hs108|chr6         ( 602) 2509 530.3 2.1e-150
CCDS55002.1 PPP2R5D gene_id:5528|Hs108|chr6        ( 570) 2494 527.2 1.7e-149
CCDS43464.1 PPP2R5D gene_id:5528|Hs108|chr6        ( 496) 2484 525.1 6.5e-149
CCDS9758.1 PPP2R5E gene_id:5529|Hs108|chr14        ( 467) 2030 430.9 1.4e-120
CCDS1503.1 PPP2R5A gene_id:5525|Hs108|chr1         ( 486) 2015 427.8 1.3e-119
CCDS55686.1 PPP2R5A gene_id:5525|Hs108|chr1        ( 429) 2003 425.2 6.5e-119
CCDS61468.1 PPP2R5E gene_id:5529|Hs108|chr14       ( 462) 1997 424.0 1.6e-118
CCDS8085.1 PPP2R5B gene_id:5526|Hs108|chr11        ( 497) 1965 417.4 1.7e-116
CCDS61467.1 PPP2R5E gene_id:5529|Hs108|chr14       ( 391) 1907 405.3  6e-113


>>CCDS9965.1 PPP2R5C gene_id:5527|Hs108|chr14             (485 aa)
 initn: 3183 init1: 3183 opt: 3183  Z-score: 3570.9  bits: 670.1 E(32554): 1.4e-192
Smith-Waterman score: 3183; 100.0% identity (100.0% similar) in 475 aa overlap (1-475:11-485)

                         10        20        30        40        50
pF1KA0           MVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL
               10        20        30        40        50        60

               60        70        80        90       100       110
pF1KA0 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
               70        80        90       100       110       120

              120       130       140       150       160       170
pF1KA0 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD
              130       140       150       160       170       180

              180       190       200       210       220       230
pF1KA0 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
              190       200       210       220       230       240

              240       250       260       270       280       290
pF1KA0 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
              250       260       270       280       290       300

              300       310       320       330       340       350
pF1KA0 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
              310       320       330       340       350       360

              360       370       380       390       400       410
pF1KA0 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK
              370       380       390       400       410       420

              420       430       440       450       460       470
pF1KA0 LKMKEREEAWVKIENLAKANPQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 LKMKEREEAWVKIENLAKANPQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELA
              430       440       450       460       470       480

            
pF1KA0 SQDGR
       :::::
CCDS99 SQDGR
            

>>CCDS53911.1 PPP2R5C gene_id:5527|Hs108|chr14            (540 aa)
 initn: 3049 init1: 3049 opt: 3053  Z-score: 3424.4  bits: 643.2 E(32554): 2e-184
Smith-Waterman score: 3053; 97.2% identity (98.5% similar) in 471 aa overlap (5-475:72-540)

                                         10        20        30    
pF1KA0                           MVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQ
                                     .:..:  .:   :  ..:::::::::::::
CCDS53 AVPSTVSAKIKVPVSQPIVKKDKRQNSSRFSASNNRELQK--LPSLKDVPPADQEKLFIQ
              50        60        70        80          90         

           40        50        60        70        80        90    
pF1KA0 KLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMF
     100       110       120       130       140       150         

          100       110       120       130       140       150    
pF1KA0 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV
     160       170       180       190       200       210         

          160       170       180       190       200       210    
pF1KA0 LQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAEL
     220       230       240       250       260       270         

          220       230       240       250       260       270    
pF1KA0 LEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEP
     280       290       300       310       320       330         

          280       290       300       310       320       330    
pF1KA0 VVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAE
     340       350       360       370       380       390         

          340       350       360       370       380       390    
pF1KA0 RALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKL
     400       410       420       430       440       450         

          400       410       420       430       440       450    
pF1KA0 FDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQAQKDPKKDRPLARRKSELPQDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQAQKDPKKDRPLARRKSELPQDP
     460       470       480       490       500       510         

          460       470     
pF1KA0 HTKKALEAHCRADELASQDGR
       :::::::::::::::::::::
CCDS53 HTKKALEAHCRADELASQDGR
     520       530       540

>>CCDS45163.1 PPP2R5C gene_id:5527|Hs108|chr14            (449 aa)
 initn: 2891 init1: 2891 opt: 2891  Z-score: 3243.9  bits: 609.5 E(32554): 2.3e-174
Smith-Waterman score: 2891; 99.5% identity (99.8% similar) in 435 aa overlap (1-435:11-445)

                         10        20        30        40        50
pF1KA0           MVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL
               10        20        30        40        50        60

               60        70        80        90       100       110
pF1KA0 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
               70        80        90       100       110       120

              120       130       140       150       160       170
pF1KA0 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD
              130       140       150       160       170       180

              180       190       200       210       220       230
pF1KA0 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
              190       200       210       220       230       240

              240       250       260       270       280       290
pF1KA0 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
              250       260       270       280       290       300

              300       310       320       330       340       350
pF1KA0 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
              310       320       330       340       350       360

              360       370       380       390       400       410
pF1KA0 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK
              370       380       390       400       410       420

              420       430       440       450       460       470
pF1KA0 LKMKEREEAWVKIENLAKANPQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELA
       ::::::::::::::::::::::. :                                   
CCDS45 LKMKEREEAWVKIENLAKANPQVLKKRIT                               
              430       440                                        

>>CCDS9964.1 PPP2R5C gene_id:5527|Hs108|chr14             (524 aa)
 initn: 2887 init1: 2887 opt: 2887  Z-score: 3238.5  bits: 608.7 E(32554): 4.6e-174
Smith-Waterman score: 3050; 92.3% identity (92.3% similar) in 507 aa overlap (1-468:11-517)

                         10        20        30        40        50
pF1KA0           MVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 MLTCNKAGSRMVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPL
               10        20        30        40        50        60

               60        70        80        90       100       110
pF1KA0 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
               70        80        90       100       110       120

              120       130       140       150       160       170
pF1KA0 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD
              130       140       150       160       170       180

              180       190       200       210       220       230
pF1KA0 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
              190       200       210       220       230       240

              240       250       260       270       280       290
pF1KA0 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
              250       260       270       280       290       300

              300       310       320       330       340       350
pF1KA0 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
              310       320       330       340       350       360

              360       370       380       390       400       410
pF1KA0 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK
              370       380       390       400       410       420

              420       430                                        
pF1KA0 LKMKEREEAWVKIENLAKANPQ--------------------------------------
       ::::::::::::::::::::::                                      
CCDS99 LKMKEREEAWVKIENLAKANPQYTVYSQASTMSIPVAMETDGPLFEDVQMLRKTVKDEAH
              430       440       450       460       470       480

             440       450       460       470     
pF1KA0 -AQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR
        ::::::::::::::::::::::::::::::::::::       
CCDS99 QAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR
              490       500       510       520    

>>CCDS53912.1 PPP2R5C gene_id:5527|Hs108|chr14            (555 aa)
 initn: 2757 init1: 2757 opt: 2758  Z-score: 3093.5  bits: 582.0 E(32554): 5.5e-166
Smith-Waterman score: 2921; 89.9% identity (90.5% similar) in 503 aa overlap (11-468:46-548)

                                   10        20              30    
pF1KA0                     MVVDAANSNGPFQPVVLLHI------RDVPPADQEKLFIQ
                                     :. : .:. :      ::::::::::::::
CCDS53 KSGKSSKEGQDTVESEGTSPEEPSSPKVPPPLLPELLVLIFGGLQGRDVPPADQEKLFIQ
          20        30        40        50        60        70     

           40        50        60        70        80        90    
pF1KA0 KLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMF
          80        90       100       110       120       130     

          100       110       120       130       140       150    
pF1KA0 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV
         140       150       160       170       180       190     

          160       170       180       190       200       210    
pF1KA0 LQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAEL
         200       210       220       230       240       250     

          220       230       240       250       260       270    
pF1KA0 LEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEP
         260       270       280       290       300       310     

          280       290       300       310       320       330    
pF1KA0 VVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAE
         320       330       340       350       360       370     

          340       350       360       370       380       390    
pF1KA0 RALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKL
         380       390       400       410       420       430     

          400       410       420       430                        
pF1KA0 FDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQ----------------------
       ::::::::::::::::::::::::::::::::::::::                      
CCDS53 FDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQYTVYSQASTMSIPVAMETDGPL
         440       450       460       470       480       490     

                             440       450       460       470     
pF1KA0 -----------------AQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR
                        ::::::::::::::::::::::::::::::::::::       
CCDS53 FEDVQMLRKTVKDEAHQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR
         500       510       520       530       540       550     

>>CCDS4878.1 PPP2R5D gene_id:5528|Hs108|chr6              (602 aa)
 initn: 2631 init1: 2500 opt: 2509  Z-score: 2813.8  bits: 530.3 E(32554): 2.1e-150
Smith-Waterman score: 2553; 79.3% identity (87.7% similar) in 488 aa overlap (20-468:106-593)

                          10        20        30        40         
pF1KA0            MVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDP
                                     ..: :  ..:.:::::::::::::::::::
CCDS48 GGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQEREELFIQKLRQCCVLFDFVSDP
          80        90       100       110       120       130     

      50        60        70        80        90       100         
pF1KA0 LSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFD
       :::::.::::::.:.::::::::.:.:.:: ::::.: ::.::.::::::::::::::::
CCDS48 LSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFD
         140       150       160       170       180       190     

     110       120       130       140       150       160         
pF1KA0 PEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRER
       :::::::::::::::::::::::::::::::::::::::::::::: ::.::::::::::
CCDS48 PEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRER
         200       210       220       230       240       250     

     170       180       190       200       210       220         
pF1KA0 DFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPL
       ::::: ::::::::::::::::.:::.:::::::::::::::::::::::::::::::::
CCDS48 DFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAELLEILGSIINGFALPL
         260       270       280       290       300       310     

     230       240       250       260       270       280         
pF1KA0 KEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSP
       :::::.::..::::::::::::::::::::::::::::.:.:::::...:::.:::::::
CCDS48 KEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSP
         320       330       340       350       360       370     

     290       300       310       320       330       340         
pF1KA0 KEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLI
       ::::::::::::::::::::: :.::::::::::::::::::::::::::::::::::::
CCDS48 KEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLI
         380       390       400       410       420       430     

     350       360       370       380       390       400         
pF1KA0 SDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKE
       :::::..::::::.::::::.:::::::::::::::::::::::::::::::.:::: : 
CCDS48 SDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEKQKG
         440       450       460       470       480       490     

     410       420       430                                       
pF1KA0 KLKMKEREEAWVKIENLAKANPQAQ-----------------------------------
       ...:::::: : :::.::. :::                                     
CCDS48 RFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPTAEDIQLLKRTVETEA
         500       510       520       530       540       550     

              440       450       460       470       
pF1KA0 ----KDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR  
           :: ::.. : ::::::::: .: :::::: ::.:         
CCDS48 VQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQEAL
         560       570       580       590       600  

>>CCDS55002.1 PPP2R5D gene_id:5528|Hs108|chr6             (570 aa)
 initn: 2616 init1: 2485 opt: 2494  Z-score: 2797.3  bits: 527.2 E(32554): 1.7e-149
Smith-Waterman score: 2538; 77.3% identity (86.1% similar) in 502 aa overlap (6-468:60-561)

                                        10        20        30     
pF1KA0                          MVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQK
                                     .::. :   .  ..    :   ...:::::
CCDS55 GENTEEAQPQPQPQPQPQAQSQPPSSNKRPSNSTPPPTQLSKIKYSGGPQIVKKELFIQK
      30        40        50        60        70        80         

          40        50        60        70        80        90     
pF1KA0 LRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFR
       :::::::::::::::::::.::::::.:.::::::::.:.:.:: ::::.: ::.::.::
CCDS55 LRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLFR
      90       100       110       120       130       140         

         100       110       120       130       140       150     
pF1KA0 TLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVL
     150       160       170       180       190       200         

         160       170       180       190       200       210     
pF1KA0 QLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELL
        ::.::::::::::::::: ::::::::::::::::.:::.:::::::::::::::::::
CCDS55 ALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAELL
     210       220       230       240       250       260         

         220       230       240       250       260       270     
pF1KA0 EILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPV
       :::::::::::::::::::.::..::::::::::::::::::::::::::::.:.:::::
CCDS55 EILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEPV
     270       280       290       300       310       320         

         280       290       300       310       320       330     
pF1KA0 VMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAER
       ...:::.:::::::::::::::::::::::::::: :.::::::::::::::::::::::
CCDS55 IVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAER
     330       340       350       360       370       380         

         340       350       360       370       380       390     
pF1KA0 ALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLF
       :::::::::::::::::::..::::::.::::::.:::::::::::::::::::::::::
CCDS55 ALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLF
     390       400       410       420       430       440         

         400       410       420       430                         
pF1KA0 DDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQAQ---------------------
       ::::::.:::: : ...:::::: : :::.::. :::                       
CCDS55 DDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPTA
     450       460       470       480       490       500         

                            440       450       460       470      
pF1KA0 ------------------KDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR 
                         :: ::.. : ::::::::: .: :::::: ::.:        
CCDS55 EDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQEA
     510       520       530       540       550       560         

CCDS55 L
     570

>>CCDS43464.1 PPP2R5D gene_id:5528|Hs108|chr6             (496 aa)
 initn: 2606 init1: 2475 opt: 2484  Z-score: 2786.9  bits: 525.1 E(32554): 6.5e-149
Smith-Waterman score: 2528; 80.0% identity (88.1% similar) in 480 aa overlap (28-468:8-487)

               10        20        30        40        50        60
pF1KA0 MVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKR
                                  ...::::::::::::::::::::::::.:::::
CCDS43                     MPYKLKKEKELFIQKLRQCCVLFDFVSDPLSDLKFKEVKR
                                   10        20        30        40

               70        80        90       100       110       120
pF1KA0 AALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAA
       :.:.::::::::.:.:.:: ::::.: ::.::.:::::::::::::::::::::::::::
CCDS43 AGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAA
               50        60        70        80        90       100

              130       140       150       160       170       180
pF1KA0 WPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIY
       ::::::::::::::::::::::::::::::::::: ::.::::::::::::::: :::::
CCDS43 WPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIY
              110       120       130       140       150       160

              190       200       210       220       230       240
pF1KA0 GKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKV
       :::::::::::.:::.::::::::::::::::::::::::::::::::::::::.::..:
CCDS43 GKFLGLRAYIRRQINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRV
              170       180       190       200       210       220

              250       260       270       280       290       300
pF1KA0 LLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEE
       :::::::::::::::::::::::::::.:.:::::...:::.::::::::::::::::::
CCDS43 LLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEE
              230       240       250       260       270       280

              310       320       330       340       350       360
pF1KA0 ILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIM
       :::::::::: :.:::::::::::::::::::::::::::::::::::::::::..::::
CCDS43 ILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIM
              290       300       310       320       330       340

              370       380       390       400       410       420
pF1KA0 FPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAW
       ::.::::::.:::::::::::::::::::::::::::::::.:::: : ...:::::: :
CCDS43 FPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMW
              350       360       370       380       390       400

              430                                              440 
pF1KA0 VKIENLAKANPQAQ---------------------------------------KDPKKDR
        :::.::. :::                                         :: ::..
CCDS43 QKIEELARLNPQYPMFRAPPPLPPVYSMETETPTAEDIQLLKRTVETEAVQMLKDIKKEK
              410       420       430       440       450       460

             450       460       470       
pF1KA0 PLARRKSELPQDPHTKKALEAHCRADELASQDGR  
        : ::::::::: .: :::::: ::.:         
CCDS43 VLLRRKSELPQDVYTIKALEAHKRAEEFLTASQEAL
              470       480       490      

>>CCDS9758.1 PPP2R5E gene_id:5529|Hs108|chr14             (467 aa)
 initn: 2027 init1: 1710 opt: 2030  Z-score: 2278.2  bits: 430.9 E(32554): 1.4e-120
Smith-Waterman score: 2030; 71.9% identity (88.1% similar) in 420 aa overlap (8-426:38-453)

                                      10         20        30      
pF1KA0                        MVVDAANSNG-PFQPVVLLHIRDVPPADQEKLFIQKL
                                     :.: :.. . :  ..::: ..: .::..::
CCDS97 PPSVDKVDGFSRKSVRKARQKRSQSSSQFRSQGKPIELTPLPLLKDVPSSEQPELFLKKL
        10        20        30        40        50        60       

         40        50        60        70        80        90      
pF1KA0 RQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRT
       .::::.:::. : ::::: :: ::..:.:.:.::: .:. .::  :::::.: . :.:::
CCDS97 QQCCVIFDFM-DTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRT
        70         80        90       100       110       120      

        100       110       120       130       140       150      
pF1KA0 LPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQ
       ::::..    :::::::::::::.:::::::::::.::::: .:::.:::::::::::::
CCDS97 LPPSDS---NEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQ
        130          140       150       160       170       180   

        160       170       180       190       200       210      
pF1KA0 LLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLE
       ::::::::::::::.:::.:::::::::::::.::::::::: ::.::::: ::.:::::
CCDS97 LLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLE
           190       200       210       220       230       240   

        220       230       240       250       260       270      
pF1KA0 ILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVV
       :::::::::::::: ::: ::.:::.::: :.:::..: :::::.::::::: .:::::.
CCDS97 ILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVI
           250       260       270       280       290       300   

        280       290       300       310       320       330      
pF1KA0 MALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERA
        .:.:.:::: : ::::::.::::::::::::.::::.::::.:.:::::::::::::::
CCDS97 RGLMKFWPKTCSQKEVMFLGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERA
           310       320       330       340       350       360   

        340       350       360       370       380       390      
pF1KA0 LYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFD
       ::::::::::::: .:.  :::::: :::: :: ::: .: .:.::.:: :::::. .::
CCDS97 LYYWNNEYIMSLIEENSNVILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFD
           370       380       390       400       410       420   

        400       410       420       430       440       450      
pF1KA0 DCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQAQKDPKKDRPLARRKSELPQDPHT
       . :  .:... .:: : ::::: : :.:.:                              
CCDS97 ELTATYKSDRQREKKKEKEREELWKKLEDLELKRGLRRDGIIPT                
           430       440       450       460                       

>>CCDS1503.1 PPP2R5A gene_id:5525|Hs108|chr1              (486 aa)
 initn: 1987 init1: 1688 opt: 2015  Z-score: 2261.1  bits: 427.8 E(32554): 1.3e-119
Smith-Waterman score: 2015; 71.1% identity (88.5% similar) in 419 aa overlap (8-426:49-461)

                                      10        20        30       
pF1KA0                        MVVDAANSNGPFQPVVLLHIRDVPPADQEKLFIQKLR
                                     :.. ..:  : ...:.   .:..:: :::.
CCDS15 EKVDGFTRKSVRKAQRQKRSQGSSQFRSQGSQAELHP--LPQLKDATSNEQQELFCQKLQ
       20        30        40        50          60        70      

        40        50        60        70        80        90       
pF1KA0 QCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTL
       :::.::::. : .:::: ::.:::.:.:.:::.. ::.::.:  : ..:.:...:.::::
CCDS15 QCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMISANIFRTL
         80         90       100       110       120       130     

       100       110       120       130       140       150       
pF1KA0 PPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQL
       :::.::   .::::::::::::.:::.::::::::::::::::::.:::.::::::: ::
CCDS15 PPSDNP---DFDPEEDEPTLEASWPHIQLVYEFFLRFLESPDFQPSIAKRYIDQKFVQQL
         140          150       160       170       180       190  

       160       170       180       190       200       210       
pF1KA0 LELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEI
       :::::::::::::::::.:::::::::::::.::::::::: :::::::: ::.::::::
CCDS15 LELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVAELLEI
            200       210       220       230       240       250  

       220       230       240       250       260       270       
pF1KA0 LGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVM
       ::::::::::::: ::: ::.:::.:.: .:.:...: :::::::::::::.::::::. 
CCDS15 LGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTTLTEPVIR
            260       270       280       290       300       310  

       280       290       300       310       320       330       
pF1KA0 ALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERAL
       .:::.:::: : ::::::.:.:::::::::..: :: ::::.:..::::: :::::::::
CCDS15 GLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHFQVAERAL
            320       330       340       350       360       370  

       340       350       360       370       380       390       
pF1KA0 YYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDD
       :.::::::.::: .:  ::::::: :::. :: ::: :: .:.::.:: .:::: :::::
CCDS15 YFWNNEYILSLIEENIDKILPIMFASLYKISKEHWNPTIVALVYNVLKTLMEMNGKLFDD
            380       390       400       410       420       430  

       400       410       420       430       440       450       
pF1KA0 CTQQFKAEKLKEKLKMKEREEAWVKIENLAKANPQAQKDPKKDRPLARRKSELPQDPHTK
        :...:::. .:: :  :::: : :.:.:                               
CCDS15 LTSSYKAERQREKKKELEREELWKKLEELKLKKALEKQNSAYNMHSILSNTSAE      
            440       450       460       470       480            




475 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 00:22:45 2016 done: Fri Nov  4 00:22:46 2016
 Total Scan time:  2.960 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com