FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9430, 433 aa 1>>>pF1KB9430 433 - 433 aa - 433 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.3570+/-0.000413; mu= 2.6945+/- 0.026 mean_var=371.8891+/-76.732, 0's: 0 Z-trim(123.0): 94 B-trim: 77 in 1/57 Lambda= 0.066507 statistics sampled from 41867 (41969) to 41867 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.772), E-opt: 0.2 (0.492), width: 16 Scan time: 11.770 The best scores are: opt bits E(85289) NP_003098 (OMIM: 184430) transcription factor SOX- ( 474) 2096 214.8 3.8e-55 NP_003099 (OMIM: 600898,615866) transcription fact ( 441) 781 88.6 3.4e-17 NP_008874 (OMIM: 601947) transcription factor SOX- ( 315) 647 75.6 2.1e-13 NP_005977 (OMIM: 602148) transcription factor SOX- ( 391) 460 57.7 6e-08 NP_009015 (OMIM: 604974) transcription factor SOX- ( 276) 456 57.2 6.3e-08 NP_008873 (OMIM: 601297) protein SOX-15 [Homo sapi ( 233) 426 54.2 4.2e-07 NP_055402 (OMIM: 605923) transcription factor SOX- ( 446) 430 54.9 4.8e-07 NP_005625 (OMIM: 300123,312000,313430) transcripti ( 446) 420 54.0 9.3e-07 NP_008872 (OMIM: 602229,609136,611584,613266) tran ( 466) 411 53.1 1.7e-06 NP_003097 (OMIM: 184429,189960,206900) transcripti ( 317) 402 52.1 2.5e-06 NP_004180 (OMIM: 604747) transcription factor SOX- ( 240) 394 51.1 3.6e-06 NP_000337 (OMIM: 114290,608160,616425) transcripti ( 509) 399 52.0 4.1e-06 NP_071899 (OMIM: 610928,613674) transcription fact ( 414) 376 49.7 1.7e-05 NP_060889 (OMIM: 137940,601618,607823) transcripti ( 384) 369 49.0 2.5e-05 NP_113627 (OMIM: 612202) transcription factor SOX- ( 388) 369 49.0 2.5e-05 NP_821078 (OMIM: 604975,616803) transcription fact ( 377) 343 46.5 0.00014 XP_011519144 (OMIM: 604975,616803) PREDICTED: tran ( 415) 343 46.6 0.00015 NP_001248343 (OMIM: 604975,616803) transcription f ( 642) 343 46.8 0.0002 XP_016875390 (OMIM: 604975,616803) PREDICTED: tran ( 715) 343 46.8 0.00021 XP_016875388 (OMIM: 604975,616803) PREDICTED: tran ( 715) 343 46.8 0.00021 XP_016875389 (OMIM: 604975,616803) PREDICTED: tran ( 715) 343 46.8 0.00021 XP_016875387 (OMIM: 604975,616803) PREDICTED: tran ( 715) 343 46.8 0.00021 XP_016875386 (OMIM: 604975,616803) PREDICTED: tran ( 716) 343 46.8 0.00021 NP_001317714 (OMIM: 604975,616803) transcription f ( 728) 343 46.9 0.00021 XP_011519140 (OMIM: 604975,616803) PREDICTED: tran ( 729) 343 46.9 0.00021 XP_016875385 (OMIM: 604975,616803) PREDICTED: tran ( 750) 343 46.9 0.00021 NP_694534 (OMIM: 604975,616803) transcription fact ( 750) 343 46.9 0.00021 XP_016875379 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 46.9 0.00022 XP_011519137 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 46.9 0.00022 XP_016875383 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 46.9 0.00022 XP_016875384 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 46.9 0.00022 XP_011519139 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 46.9 0.00022 XP_011519136 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 46.9 0.00022 XP_016875381 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 46.9 0.00022 XP_016875380 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 46.9 0.00022 XP_016875382 (OMIM: 604975,616803) PREDICTED: tran ( 751) 343 46.9 0.00022 NP_001248344 (OMIM: 604975,616803) transcription f ( 753) 343 46.9 0.00022 XP_011519135 (OMIM: 604975,616803) PREDICTED: tran ( 754) 343 46.9 0.00022 NP_008871 (OMIM: 604975,616803) transcription fact ( 763) 343 46.9 0.00022 XP_011519134 (OMIM: 604975,616803) PREDICTED: tran ( 764) 343 46.9 0.00022 XP_016875378 (OMIM: 604975,616803) PREDICTED: tran ( 792) 343 46.9 0.00022 XP_016875377 (OMIM: 604975,616803) PREDICTED: tran ( 793) 343 46.9 0.00022 NP_201583 (OMIM: 607257) transcription factor SOX- ( 808) 343 46.9 0.00023 XP_005245680 (OMIM: 604748) PREDICTED: transcripti ( 621) 340 46.5 0.00023 NP_005677 (OMIM: 604748) transcription factor SOX- ( 622) 340 46.5 0.00023 NP_001139283 (OMIM: 607257) transcription factor S ( 801) 339 46.5 0.00029 NP_059978 (OMIM: 607257) transcription factor SOX- ( 804) 339 46.5 0.00029 NP_001139291 (OMIM: 607257) transcription factor S ( 841) 339 46.6 0.0003 NP_003131 (OMIM: 400044,400045,480000) sex-determi ( 204) 321 44.1 0.00041 >>NP_003098 (OMIM: 184430) transcription factor SOX-4 [H (474 aa) initn: 2197 init1: 2058 opt: 2096 Z-score: 1111.1 bits: 214.8 E(85289): 3.8e-55 Smith-Waterman score: 2699; 91.2% identity (91.2% similar) in 465 aa overlap (1-424:1-465) 10 20 30 40 50 60 pF1KB9 MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 ADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 ADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 GGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 GGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 QAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAALAAPGKHLAEKKVKRVYLFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 QAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAALAAPGKHLAEKKVKRVYLFG 250 260 270 280 290 300 310 pF1KB9 GLGTSSSP-----------------------------------------AAGRSPADHRG :::::::: ::::::::::: NP_003 GLGTSSSPVGGVGAGADPSDPLGLYEEEGAGCSPDAPSLSGRSSAASSPAAGRSPADHRG 310 320 330 340 350 360 320 330 340 350 360 370 pF1KB9 YASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSSDDEFEDDLLDLNPSSNFESMSLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 YASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSSDDEFEDDLLDLNPSSNFESMSLG 370 380 390 400 410 420 380 390 400 410 420 430 pF1KB9 SFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDWLESSISNLVFTY ::::::::::::::::::::::::::::::::::::::::::::: NP_003 SFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDWLESSISNLVFTY 430 440 450 460 470 >>NP_003099 (OMIM: 600898,615866) transcription factor S (441 aa) initn: 1098 init1: 628 opt: 781 Z-score: 429.6 bits: 88.6 E(85289): 3.4e-17 Smith-Waterman score: 1018; 44.3% identity (66.6% similar) in 461 aa overlap (1-433:1-441) 10 20 30 40 50 60 pF1KB9 MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK ::::... : .:. : :. :. : :. .: ::. . . ::.:::: ::::: NP_003 MVQQAESLE-AESNLPREALDTEEG-EF-MACSPVALDES-------DPDWCKTASGHIK 10 20 30 40 50 70 80 90 100 110 120 pF1KB9 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM ::::::::::.:::::::::::::::::::::::::::.::::.:::::::::::::::: NP_003 RPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHM 60 70 80 90 100 110 130 140 150 160 170 180 pF1KB9 ADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGG ::::::::::::: : . :.. .::..: ::. ..:.:::. :::.::.... :.. NP_003 ADYPDYKYRPRKKPK---MDPSAKPSASQSP-EKS--AAGGGGGSAGGGAGGAKTSKGSS 120 130 140 150 160 190 200 210 220 230 pF1KB9 ---GGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASF : . ..:..: . :. : :::: .. .::::.::.. . . NP_003 KKCGKLKAPAAAGAKAGAGKAAQSGDYGGAGDDYVLGSLRVSGSGGGGAGKTVKCVFLDE 170 180 190 200 210 220 240 250 260 270 280 pF1KB9 AAEQAGAAALLPLGAAAD---------HHSLYK--ARTPSASASASSAASASAALAAPGK .. : : . :..: . .. :: ..:.. :. : NP_003 DDDDDDDDDELQLQIKQEPDEEDEEPPHQQLLQPPGQQPSQLLRRYNVAKVPAS---PTL 230 240 250 260 270 280 290 300 310 320 330 340 pF1KB9 HLAEKKVKRVYLFGGLGTSSSPAAGRSPADHRGYASLRAASPAPSSAP--SHASSSASSH . .. . . :. . .... .:: . . .. .. : : . : : ::: . : NP_003 SSSAESPEGASLYDEVRAGATSGAGGGSRLYYSFKNITKQHPPPLAQPALSPASSRSVST 290 300 310 320 330 340 350 360 370 380 390 pF1KB9 SSSSSSSGSSSSDDEFEDDL---LDLNPSSNFESMS---LGSFSSSSAL-----DRDLDF ::::::..::.:. : ::: :.:: :.. .: : ::. .... : :.::: NP_003 SSSSSSGSSSGSSGEDADDLMFDLSLNFSQSAHSASEQQLGGGAAAGNLSLSLVDKDLD- 350 360 370 380 390 400 400 410 420 430 pF1KB9 NFEPGS-GSHFEFPDYCTPEVSEMISGDWLESSISNLVFTY .: :: :::::::::::::.::::.:::::...:.::::: NP_003 SFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY 410 420 430 440 >>NP_008874 (OMIM: 601947) transcription factor SOX-12 [ (315 aa) initn: 862 init1: 580 opt: 647 Z-score: 361.7 bits: 75.6 E(85289): 2.1e-13 Smith-Waterman score: 740; 40.6% identity (55.1% similar) in 401 aa overlap (34-433:16-315) 10 20 30 40 50 60 pF1KB9 QTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIKRPM : :: . : : .:.::::::::::::: NP_008 MVQQRGARAKRDGGPPPPGPGPAEEG-AREPGWCKTPSGHIKRPM 10 20 30 40 70 80 90 100 110 120 pF1KB9 NAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADY :::::::: ::::::.: :::::::::::::.::.::.::.::::.:::::::::::::: NP_008 NAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMADY 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB9 PDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGGGGG :::::::::: :..: :...: : NP_008 PDYKYRPRKK--------SKGAPAKARPRPPG---------------------------- 110 120 190 200 210 220 230 240 pF1KB9 ASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAEQAG .::::. :: : .. : :: . ::: :: ::: . NP_008 GSGGGSRLKP------GPQLPG-RGGRRA--------AGGPLGGGAAAPEDDD------- 130 140 150 160 250 260 270 280 290 300 pF1KB9 AAALLPLGAAADHHSLYKARTPSASASASSAASASAALAAPGKHLAEKKVKRVYLFGGLG : . : ..: . .::..: . .. .: . NP_008 ---------EDDDEELLEVRL----------------VETPGRELWR------MVPAGRA 170 180 190 310 320 330 340 350 360 pF1KB9 TSSSPAAGRSPADHRGYASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSSDDEFEDD . .. ...:. . : :. ::::.:: . .. . . .: .: NP_008 ARGQAERAQGPSGE-GAAAAAAASPTPSEDEEPEEEEEEAAAAEEGEEETVASGEESLGF 200 210 220 230 240 250 370 380 390 400 410 420 pF1KB9 LLDLNPSSNFESMSLGSFSSSSALDRDLDFNFEPGSG-SHFEFPDYCTPEVSEMISGDWL : : :. .: . :::::: :. .: :: :::::::::::::.:::.::: NP_008 LSRLPPGPA----GL----DCSALDRDPDL--QPPSGTSHFEFPDYCTPEVTEMIAGDWR 260 270 280 290 300 430 pF1KB9 ESSISNLVFTY :::..::::: NP_008 PSSIADLVFTY 310 >>NP_005977 (OMIM: 602148) transcription factor SOX-1 [H (391 aa) initn: 413 init1: 413 opt: 460 Z-score: 263.7 bits: 57.7 E(85289): 6e-08 Smith-Waterman score: 509; 34.8% identity (58.7% similar) in 339 aa overlap (20-353:12-310) 10 20 30 40 50 60 pF1KB9 MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK : .:: .... :. .. :: . . :. . ..: NP_005 MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGAKANQDRVK 10 20 30 40 50 70 80 90 100 110 120 pF1KB9 RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM ::::::::::. .:::. ...: :::.::::::: .::......: ::: ::.::: :: NP_005 RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHM 60 70 80 90 100 110 130 140 150 160 170 180 pF1KB9 ADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGG ..::::::::.:.:. : :: . .:: .:.::::.. : : NP_005 KEHPDYKYRPRRKTKTL---------------LKKDKYSLAGGLLAAGAGGGGAAVAMGV 120 130 140 150 190 200 210 220 230 240 pF1KB9 GGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAE : :. :: . . .: : :.:::: . :.. :. :. :::::::.. : NP_005 GVGV---GAAAVGQRLESPG----GAAGGGYA--HVNGWANGAYPGSVAAAAAAAAMMQE 160 170 180 190 200 250 260 270 280 290 300 pF1KB9 QAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAALAAPGKHLAEKKVKRVYLFG : : : .: :.:... : : : : . . . : .: NP_005 -----AQLAYG----QH-------PGAGGAHPHAHPAHPHPHHPHAHPHNPQPMHRYDMG 210 220 230 240 250 310 320 330 340 350 pF1KB9 GLGTSS-SPAAGRSPADHRGYASL---RAASPAPSSAPSHASSS-ASSHSSSSSSSGSSS .: : : . : :. ::..: ::. : ... .: .:. :.. .....:::. NP_005 ALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAAAAAAAASSGALG 260 270 280 290 300 310 360 370 380 390 400 410 pF1KB9 SDDEFEDDLLDLNPSSNFESMSLGSFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSE NP_005 ALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAAAAAAQSRLHSLP 320 330 340 350 360 370 >>NP_009015 (OMIM: 604974) transcription factor SOX-21 [ (276 aa) initn: 505 init1: 393 opt: 456 Z-score: 263.3 bits: 57.2 E(85289): 6.3e-08 Smith-Waterman score: 464; 40.2% identity (65.2% similar) in 244 aa overlap (55-287:4-222) 30 40 50 60 70 80 pF1KB9 GLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDM : :.:::::::::::. .:::. ...: : NP_009 MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKM 10 20 30 90 100 110 120 130 140 pF1KB9 HNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADYPDYKYRPRKKVKSGNANSSSS ::.::::::: .:::: .:.: ::: ::.::: :: ..::::::::.: :. ... . NP_009 HNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFA 40 50 60 70 80 90 150 160 170 180 190 200 pF1KB9 AAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVA : : .:: . . : . .:.. .::.::: . : . . :.: NP_009 F-----PVPYG--LGGVADAEHPALKAGAGLHAGAGGGLV--------PESLLANPEKAA 100 110 120 130 210 220 230 240 250 pF1KB9 GGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAEQAGAA-ALLPLGA-----AADHHS ..:.... :.... ..::::::. :: ::. .:: ::. ... . NP_009 AAAAAAA----ARVFFP------QSAAAAAAAAAAAAAGSPYSLLDLGSKMAEISSSSSG 140 150 160 170 180 260 270 280 290 300 310 pF1KB9 LYKART---PSASASA--SSAASASAALAAPGKHLAEKKVKRVYLFGGLGTSSSPAAGRS : : . :.:.:.: ..::.:.:: :: : : NP_009 LPYASSLGYPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNCSAWPSPGL 190 200 210 220 230 240 320 330 340 350 360 370 pF1KB9 PADHRGYASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSSDDEFEDDLLDLNPSSNF NP_009 QPPLAYILLPGMGKPQLDPYPAAYAAAL 250 260 270 >>NP_008873 (OMIM: 601297) protein SOX-15 [Homo sapiens] (233 aa) initn: 446 init1: 396 opt: 426 Z-score: 248.6 bits: 54.2 E(85289): 4.2e-07 Smith-Waterman score: 433; 43.4% identity (69.9% similar) in 173 aa overlap (15-182:3-162) 10 20 30 40 50 pF1KB9 MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGK----ADDPSWCKT-P : : :.:.. .:: : : ....:.: . : .:. : : NP_008 MALPGSSQDQAWSLEPPAA---TAAASSSSGPQEREGAGSPAAPGTLP 10 20 30 40 60 70 80 90 100 110 pF1KB9 SGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERL ..:::::::::::. .::.. .:.: :::.::::::: .:::: ...: ::..::.:: NP_008 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRL 50 60 70 80 90 100 120 130 140 150 160 170 pF1KB9 RLKHMADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSS : .:. ::::::::::.:.::..:. :.. :. :. ..:: : : ... NP_008 RARHLRDYPDYKYRPRRKAKSSGAG----------PSRCGQGRGNLASGGPLWGPGYATT 110 120 130 140 150 180 190 200 210 220 230 pF1KB9 NAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAA . . : : NP_008 QPSRGFGYRPPSYSTAYLPGSYGSSHCKLEAPSPCSLPQSDPRLQGELLPTYTHYLPPGS 160 170 180 190 200 210 >>NP_055402 (OMIM: 605923) transcription factor SOX-8 [H (446 aa) initn: 452 init1: 403 opt: 430 Z-score: 247.5 bits: 54.9 E(85289): 4.8e-07 Smith-Waterman score: 430; 31.6% identity (57.3% similar) in 307 aa overlap (58-353:101-394) 30 40 50 60 70 80 pF1KB9 LGIASSPTPGSTASTGGKADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNA :.::::::::::.: :::. .: : .::: NP_055 AVSQVLKGYDWSLVPMPVRGGGGGALKAKPHVKRPMNAFMVWAQAARRKLADQYPHLHNA 80 90 100 110 120 130 90 100 110 120 130 140 pF1KB9 EISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADYPDYKYRPRKK--VKSGNANSSSSA :.:: ::: :.::..:.: ::..::::::..: :.:::::.::.. .:.:...:.:.: NP_055 ELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHSDSDSGA 140 150 160 170 180 190 150 160 170 180 190 pF1KB9 AASSKPGEKGDKV----GGSGGGGHGGGGGGGSSNAGGGGGGASG--GGANSKPAQKKSC . .:: : : .: : : : : : . . . :..:: . : NP_055 ELGPHPG--GGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKP-ELKLE 200 210 220 230 240 200 210 220 230 240 250 pF1KB9 GSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAA--EQAGAAALLPLGAAADHH : . . .. ... .. . .. : : . : .: : : : : NP_055 GRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPLGGPAPPEP-GQAYGGA 250 260 270 280 290 300 260 270 280 290 300 310 pF1KB9 SLYKARTPS-ASASASSAASASAALAAPGKHLAEKKVKRVYLFGGLGTSSSPAAGRSPAD .. . .: : :: ::... . . : :. .. . : : ..: :. : NP_055 YFHAGASPVWAHKSAPSASASPTETGPPRPHIKTEQPSP----GHYG--DQP---RGSPD 310 320 330 340 350 320 330 340 350 360 370 pF1KB9 HRGYASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSSDDEFEDDLLDLNPSSNFESM . . .. .:.:: ..: .:.. . ..:: :. NP_055 YGSCSGQSSATPAAPAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSPRRPYAS 360 370 380 390 400 410 380 390 400 410 420 430 pF1KB9 SLGSFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDWLESSISNLVFTY NP_055 PLLNGLALPPAHSPTSHWDQPVYTTLTRP 420 430 440 >>NP_005625 (OMIM: 300123,312000,313430) transcription f (446 aa) initn: 379 init1: 379 opt: 420 Z-score: 242.3 bits: 54.0 E(85289): 9.3e-07 Smith-Waterman score: 446; 34.0% identity (57.0% similar) in 356 aa overlap (16-334:106-442) 10 20 30 40 pF1KB9 MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGK ::.:: ..:: : :. .. :: :: NP_005 MYSLLETELKNPVGTPTQAAGTGGPAAPGGAGKSSANAAG---GANSGGGSSGGASGGGG 80 90 100 110 120 130 50 60 70 80 90 100 pF1KB9 ADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDK . : . ..:::::::::::. .:::. ..: :::.::::::: :::: :..: NP_005 GTDQD-------RVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEK 140 150 160 170 180 110 120 130 140 pF1KB9 IPFIREAERLRLKHMADYPDYKYRPRKKVK-----------SG---------NANSSSSA ::: ::.::: :: .:::::::::.:.: :: : ....: NP_005 RPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPSGLLPPGAAAAAAAAAAAA 190 200 210 220 230 240 150 160 170 180 190 200 pF1KB9 AASSKPGEKGDKVGG-SGGGGHGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVA ::.:.: :... . .: ..:. . .. : . : .. :: .: NP_005 AAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPPSMSSPPPPPALPPMHRYDMA 250 260 270 280 290 300 210 220 230 240 250 pF1KB9 GGAGGGVSKPHAKLIL-------AGGGGGG---KAAAAAAASFAAEQAGAAALLPLGAAA : . . : :. . :..: :: .:.:::::... . : ::: .::: NP_005 GLQYSPMMPPGAQSYMNVAAAAAAASGYGGMAPSATAAAAAAYGQQPATAAA---AAAAA 310 320 330 340 350 360 260 270 280 290 300 pF1KB9 DHHSLYKARTPSASASASSAASASAALAAPGKH--LAE-KKVKRVYLF--GGLGTSSSP- :: : .:. : .: :.:. ... :.. . . .:: : . ..:: NP_005 AAMSL----GPMGSVVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPL 370 380 390 400 410 310 320 330 340 350 360 pF1KB9 AAGRSPADHRGYASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSSDDEFEDDLLDLN .:: . :. : . :.. . ...: NP_005 PGGRLHGVHQHYQG--AGTAVNGTVPLTHI 420 430 440 >>NP_008872 (OMIM: 602229,609136,611584,613266) transcri (466 aa) initn: 369 init1: 369 opt: 411 Z-score: 237.4 bits: 53.1 E(85289): 1.7e-06 Smith-Waterman score: 429; 29.1% identity (53.5% similar) in 368 aa overlap (58-410:103-462) 30 40 50 60 70 80 pF1KB9 LGIASSPTPGSTASTGGKADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNA :.::::::::::.: :::. .: : .::: NP_008 REAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNA 80 90 100 110 120 130 90 100 110 120 130 140 pF1KB9 EISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADYPDYKYRPRKKVKSGNANSSSSAAA :.:: ::: :.::..::: :::.::::::..: :.:::::.::.. :.:.: .. . NP_008 ELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRR-KNGKAAQGEAEC- 140 150 160 170 180 190 150 160 170 180 190 pF1KB9 SSKPGEKGDKVGGSGGGGHGGGG-------GGGSSNAGGGGGGASGG--GANSKPAQKKS :: .... : .. .: .. : :: . :. :: : . :. :. NP_008 ---PGGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQSHGPPTPPTTPKT 200 210 220 230 240 200 210 220 230 240 250 pF1KB9 ---CGS---KVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAEQAGAAALLPLGA :. : : . : .::: . . : .. . . .: . : :: .. NP_008 ELQSGKADPKRDGRSMGEGGKPHIDFGNVDIGEISHEVMSNMETF--DVAELDQYLPPNG 250 260 270 280 290 300 260 270 280 290 300 310 pF1KB9 AADHHSLYKARTPSASASASSAASASAALAAPGKHLAEKKVKRVYLFGGLGTSSSPAAGR : : :.: . ... . :.. :: .. : .: :. . . ... :. . NP_008 HPGHVSSYSAAGYGLGSALAVASGHSAWISKP-PGVALPTVSPPGVDAKAQVKTETAGPQ 310 320 330 340 350 360 320 330 340 350 360 370 pF1KB9 SPADHRGYASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSSDDEFEDDLLDLNPSSN .: . : . . : : ..:. : . . : . : . . . : NP_008 GPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHSGQASGLYSA 370 380 390 400 410 420 380 390 400 410 420 430 pF1KB9 FESMSLGSFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDWLESSISNLVFT : :. .. .:.. . . : .:.: : : : NP_008 FSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP 430 440 450 460 pF1KB9 Y >>NP_003097 (OMIM: 184429,189960,206900) transcription f (317 aa) initn: 369 init1: 369 opt: 402 Z-score: 234.6 bits: 52.1 E(85289): 2.5e-06 Smith-Waterman score: 428; 32.2% identity (56.5% similar) in 329 aa overlap (34-354:12-307) 10 20 30 40 50 pF1KB9 QTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWC----KTPSGHI : : .:.. :: . . :. .. NP_003 MYNMMETELKPPGPQQTSGGGGGNSTAAAAGGNQKNSPDRV 10 20 30 40 60 70 80 90 100 110 pF1KB9 KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKH :::::::::::. .:::. ...: :::.::::::: .::::....: ::: ::.::: : NP_003 KRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALH 50 60 70 80 90 100 120 130 140 150 160 170 pF1KB9 MADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGG : ..::::::::.:.:. : :: :: . ::.: :.: NP_003 MKEHPDYKYRPRRKTKTL---------------MKKDKYTLPGG----LLAPGGNSMASG 110 120 130 140 180 190 200 210 220 230 pF1KB9 GGGGAS-GGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFA : ::. :.:.: :. . ... : ..:. : . .: : : .::.. NP_003 VGVGAGLGAGVN----QRMDSYAHMNGWSNGSYSMMQDQLGYPQHPG---LNAHGAAQMQ 150 160 170 180 190 240 250 260 270 280 290 pF1KB9 AEQAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAALAAPGKHLAEKKVKRVYL . .. : .. .. .. : .:. : : :. .. . ::.. :. . . . . NP_003 PMHRYDVSALQYNSMTSSQT-YMNGSPTYSMSYSQQGTPGMALGSMGSVVKSEASSSPPV 200 210 220 230 240 250 300 310 320 330 340 350 pF1KB9 FGGLGTSSSPAAGRSPADHRGYASLR---AASPAPSSAPSHASSSASSHSSSSSSSGSSS . .:: : . .: : . :. : : :. :::. :.: .:. :.. NP_003 ---VTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPA-APSRL--HMSQHYQSGPVPGTAI 260 270 280 290 300 360 370 380 390 400 410 pF1KB9 SDDEFEDDLLDLNPSSNFESMSLGSFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSE NP_003 NGTLPLSHM 310 433 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 23:20:51 2016 done: Thu Nov 3 23:20:53 2016 Total Scan time: 11.770 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]