hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/smart.HMMs.bin
Sequence file:            /tmp/20080305/iprscan-20080305-21224917/chunk_1/iprscan-20080305-21224917.nocrc
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Query sequence: pF1KB5469
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00226                                                 257.7    9.1e-73   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00226    1/1       7   156 ..     1   155 []   257.7  9.1e-73

Alignments of top-scoring domains:
SM00226: domain 1 of 1, from 7 to 156: score 257.7, E = 9.1e-73
                   *->kkVLFVCtGNiCRSpmAEalfrhllpkrglsdkwevdSAGtepWhVg
                      k+VLFVC+GNiCRSp+AEa+fr+l++++++s++w+vdSA+t+++++g
   pF1KB5469     7    KSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIG 53   

                   hpaDprAvevlkehGidisghrpkpARQlteedlkdfDlIltmdesaire
                   +p+D r ++++k+hGi++s+     ARQ+t+ed++ fD+Il+mdes++r+
   pF1KB5469    54 NPPDYRGQSCMKRHGIPMSHV----ARQITKEDFATFDYILCMDESNLRD 99   

                   icplaPg.eesrakvelwghwdeq...dipDPyyaGtEagsidaFeevrd
                   +++     + ++ak+el+g++d+q++ +i+DPyy     g + +Fe+v++
   pF1KB5469   100 LNRKSNRvKTCKAKIELLGSYDPQkqlIIEDPYY-----GNDSDFETVYQ 144  

                   eIerrvkkllke<-*
                   ++ r+++++l++   
   pF1KB5469   145 QCVRCCRAFLEK    156  

//