Result of GENSCAN for pF1KB3962
GENSCAN 1.0	Date run:  3-Nov-116	Time: 21:17:50

Sequence gi568815596r:174974612_175230209 : 255598 bp : 37.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3812   3944  133  1  1   68   95    81 0.694   7.16
 1.02 Intr +  26746  26833   88  2  1   60   82    38 0.003  -1.49
 1.03 Term +  31133  31262  130  2  1   71   49   158 0.033   6.87
 1.04 PlyA +  32222  32227    6                               1.05

 2.00 Prom +  41769  41808   40                              -4.75
 2.01 Init +  42971  43090  120  1  0   66   65    77 0.693   3.44
 2.02 Term +  43460  43798  339  1  0  -16   44   277 0.438   6.45
 2.03 PlyA +  45720  45725    6                               1.05

 3.08 PlyA -  46324  46319    6                               1.05
 3.07 Term -  53777  53605  173  0  2   65   49   151 0.400   5.91
 3.06 Intr -  56362  56062  301  1  1   35   51   150 0.257   1.38
 3.05 Intr -  62827  62775   53  2  2   68   99    33 0.206   0.11
 3.04 Intr -  64911  64780  132  1  0   72   49   118 0.454   6.00
 3.03 Intr -  68538  68328  211  0  1   14   20   131 0.183  -3.54
 3.02 Intr -  69457  69009  449  2  2   53   86   210 0.117   9.44
 3.01 Init -  83331  83274   58  0  1   69   71    52 0.175   3.12
 3.00 Prom -  92210  92171   40                              -4.55

 4.06 PlyA -  92398  92393    6                               1.05
 4.05 Term - 100224  99998  227  1  2   80   38   187 0.883   8.86
 4.04 Intr - 106154 106049  106  2  1   49   73    86 0.003   2.07
 4.03 Intr - 118656 118450  207  0  0   66   80   234 0.775  18.75
 4.02 Intr - 122982 122833  150  0  0   50   96   119 0.937   8.34
 4.01 Init - 133031 132903  129  2  0  104   27    83 0.856   4.00
 4.00 Prom - 134795 134756   40                              -2.65

 5.18 PlyA - 134870 134865    6                               1.05
 5.17 Term - 136682 136638   45  2  0  109   49    35 0.836  -2.07
 5.16 Intr - 137043 136957   87  0  0   40  103    49 0.202   0.85
 5.15 Intr - 139497 139383  115  2  1   91   63    38 0.321   1.13
 5.14 Intr - 140257 140079  179  1  2   71   75   106 0.482   5.40
 5.13 Intr - 143507 143379  129  2  0   65   72   115 0.985   7.57
 5.12 Intr - 143758 143640  119  2  2   71   53    92 0.973   3.26
 5.11 Intr - 146929 146833   97  1  1   66   53   121 0.879   5.06
 5.10 Intr - 155596 155527   70  0  1   75   90    46 0.280   1.77
 5.09 Intr - 193297 193210   88  2  1   62   59    66 0.100  -0.79
 5.08 Intr - 193827 193630  198  1  0   68   81   167 0.566  12.40
 5.07 Intr - 195600 195473  128  2  2   32   50    68 0.131  -3.20
 5.06 Intr - 204639 204446  194  0  2  122   89   189 0.864  19.77
 5.05 Intr - 205567 205487   81  1  0   79   75    47 0.727   1.42
 5.04 Intr - 206855 206744  112  1  1  113   78    43 0.966   5.26
 5.03 Intr - 207462 207371   92  0  2   79   45    96 0.508   2.27
 5.02 Intr - 209718 209541  178  2  1   49   34   229 0.518  12.60
 5.01 Init - 229717 229641   77  1  2   58   94    34 0.086   1.63
 5.00 Prom - 239000 238961   40                              -3.75


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 108447 109352  906  2  0   86   39   217 0.966  12.59
S.002 Sngl + 215522 216229  708  1  0   70   47   228 0.958  12.87


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:174974612_175230209|GENSCAN_predicted_peptide_1|116_aa
MAAQGIKQRMRSLCVWALSDCVGHMPMKPALIQVKHFYKPTYYTGHSYGKSENFLTTSQR
ICHCYLIAPKDVHRLTVAGAGDLKLQGSGRNRGTESCIPLRLDLGAASSSDEIDTH

>gi568815596r:174974612_175230209|GENSCAN_predicted_CDS_1|351_bp
atggcagcacagggcattaaacaaagaatgaggtctctctgcgtgtgggccctgagtgac
tgcgtaggtcacatgccaatgaagccagccctgattcaggttaaacatttctacaaacct
acttactacacaggacattcctatgggaaatcagaaaatttcctaactacatcacaaaga
atatgccattgctatttaattgctccaaaagatgtccataggctcactgtggctggagcc
ggtgacctgaagctgcagggctctggtaggaacagaggcactgaaagctgcattcctctc
cgtttggacttaggagctgctagtagttctgatgaaattgacacacattag

>gi568815596r:174974612_175230209|GENSCAN_predicted_peptide_2|152_aa
MPASNTLNQMQEQRNDLKLEFIFKREAEHKSLENLQPGTEISEVVRENPRCPGRSLLQDR
LPIDKLYYGTAERNVGLELPHRVLTKALPSGAVGKGQLPSRPKNGRGTSSLQPQCGKAIG
TKLRPMRAYTGAVPCNATGVELPKALRVHPSQ

>gi568815596r:174974612_175230209|GENSCAN_predicted_CDS_2|459_bp
atgcctgcttctaacaccctaaatcagatgcaggagcaaaggaacgacttaaagttggaa
ttcatatttaaaagggaagcagagcataaaagtttggaaaatttgcagcctggtactgag
atttcagaggtggtacgggaaaaccctaggtgcccaggcagaagcctgctgcaggacaga
ttacccatagataaactctattacggcactgctgaaagaaatgtagggttagaactgcca
cacagagtcctcaccaaggcactgcctagtggagctgtgggaaagggacagctgccttcc
agacccaagaatggtagaggcaccagcagtttgcagcctcagtgtggaaaggccataggc
accaagctccgacccatgagagcatacacaggagctgtaccctgcaatgccacaggggtg
gagctgcccaaggccttgagagtccacccctcacagtaa

>gi568815596r:174974612_175230209|GENSCAN_predicted_peptide_3|458_aa
MSLERDPFRDTKAQQLEVEVLEALAWAIRQENNIKSIQIGKEEVKLSLFADDMILYLENP
IISAPKLLELTSNFSKVSGYKINVQKSQAFLYTNNRQAESQIMNELPFTIATKRIKYLGI
QLTRDVKDLFKENYKPLIKEIRENTNKWKKIPSSWIGRINIMKTTILPKKKILGNTIQDI
GMGKAFMTKTPKATATKAKIDKWDPIKLKSFCTAKKAIIRVNRQPTEWEKIFAIYQSDKG
VLLTLVFNHWSRGVIETVLSGSVVTEGKAPSPRSLQSHQGSPGDEKAKVQRGRDLPKARE
QGHTKHFSTEEQNFCDSETGCTIDTRALRGLHLILRAKTADRQLLKLWPCEALLGLWVTL
PPSFPQPSSMDYVSREAAWAALLSLLCLLRPLTTASLLPNTWAGPRLLPRPSMAMATGIS
NTESRLNFDHVGTILKVRPVGNNLSWETVMPLSTPTGL

>gi568815596r:174974612_175230209|GENSCAN_predicted_CDS_3|1377_bp
atgagcctagaaagagaccctttcagagacacaaaagcacagcagcttgaagttgaagta
ttggaagcgctggcctgggcaatcaggcaagagaacaacataaagagtattcaaatagga
aaagaggaagttaagttgtctctgtttgcagatgacatgattttatatttagaaaacccc
atcatctcagccccaaaactccttgaactgacaagcaacttcagcaaagtctcaggatac
aaaatcaatgtgcaaaaatcacaagcattcctttacaccaacaataggcaagcagagagc
caaatcatgaatgaacttccattcacaatcgctacaaagagaataaaatacctaggaata
cagctaacaagggatgtgaaggacctcttcaaggagaactacaaaccactgatcaaggaa
ataagagagaacacaaacaaatggaaaaagattccatcctcatggataggaagaatcaat
atcatgaaaacgaccatattgcccaagaaaaaaatcctaggcaataccattcaggacata
ggcatgggcaaagccttcatgacaaaaacgccaaaagcaactgcaacaaaagccaaaatt
gacaaatgggatccaattaaactaaagagcttctgcacagcaaaaaaagctatcatcaga
gtgaacaggcaacctacagaatgggagaaaatttttgcaatctaccaatctgacaaaggg
gtgctgttgacgttggtatttaatcattggtccagaggagttattgaaactgtgctaagt
ggcagtgtggtcacagaaggaaaagccccaagtccacgaagtttgcagtctcatcaagga
agccctggggatgaaaaagccaaggttcagagaggtagagacttgcccaaggccagagag
cagggacacacaaaacacttcagcactgaggaacagaatttctgtgattctgagactgga
tgcacaattgacaccagggctcttaggggtctccacctcatccttagggccaagacagca
gacagacagctgctaaagctgtggccctgtgaagctcttcttggcctgtgggtcactctt
cctccctctttcccacaaccgtcttctatggactatgtcagcagagaggctgcctgggca
gctctgctgtccttgctgtgtctcttacggcctttgaccacagcttctctcttgcccaac
acttgggcaggaccacggcttcttccacgtccttccatggctatggccacaggcatcagc
aatacggaaagtagactcaactttgaccacgtgggcacaatcctgaaagtgagaccagtt
gggaacaatctgtcctgggaaacagtcatgcctctttccactcccacgggactttag

>gi568815596r:174974612_175230209|GENSCAN_predicted_peptide_4|272_aa
MAAAQSSFGSASEGDRGKRGRGRPWGEGEGDRGEREREREPQNRLKAALTQQHPPVTNGD
TVKGHGSGLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGRRRRAANEDPDE
KRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLL
AHKDCPVTAMQKKSGYHTADKDDSSEDISVPSSPHTEAIQHSSVSTSNGVSSTSKAEAVA
TSVLTQMADQSTEPALSQIVMAPSSQSQPSGS

>gi568815596r:174974612_175230209|GENSCAN_predicted_CDS_4|819_bp
atggcggcagcacagtccagctttggctcggcatcagagggagaccgtggaaagagaggg
agagggagaccatggggagagggagagggagaccgtggggagagggagagggagagggag
ccacaaaacagattaaaagctgctttgacccagcaacatcctccagttaccaatggtgat
actgtcaaaggtcatggtagcggattggttaggactcagtcagaggaatctcgaccgcag
tcattacaacagccagccacatccactacagaaactccggcttctccagctcacacaact
ccacagacccaaagtacaagtggtcgtcggagaagagcagctaacgaagatcctgatgaa
aaaaggagaaagtttttagagcgaaatagagcagcagcttcaagatgccgacaaaaaagg
aaagtctgggttcagtctttagagaagaaagctgaagacttgagttcattaaatggtcag
ctgcagagtgaagtcaccctgctgagaaatgaagtggcacagctgaaacagcttcttctg
gctcataaagattgccctgtaaccgccatgcagaagaaatctggctatcatactgctgat
aaagatgatagttcagaagacatttcagtgccgagtagtccacatacagaagctatacag
catagttcggtcagcacatccaatggagtcagttcaacctccaaggcagaagctgtagcc
acttcagtcctcacccagatggcggaccagagtacagagcctgctctttcacagatcgtt
atggctccttcctcccagtcacagccctcaggaagttga

>gi568815596r:174974612_175230209|GENSCAN_predicted_peptide_5|662_aa
MAGLEITSAAALEIANTCPYQRACFSEKPDDDFGAQPNKNLGFASSFGIVDALESIRQDI
HVHHCGGTKRWRKEPNDNPFIALDTPQSYFTEEENDQQVNFYYREAATDKRPNLTREEAG
EEPTSPVTQYLQPRSPEECKMFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGE
GSTVFNGAQNGVSQLIQREFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLI
IGYARTKLGRCIMEQDRQRRGLQEVSCVCKEKTVKNFRTLGDIEECKKLLPALRAPCPIM
SARVLFDARPLYPPCRRPAFFSLSLTESPDSEALPQKEGKKGRVGEGEGRQKEALGAIVA
VLPPRRPARCGLWEPDWLGRTVRQYKDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHK
HEMTLKFGPARNDSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKMP
LDLSPLATPIIRSKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPAS
LQVPNVLLTSSDSSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQTMP
VAIPASITSSNVHVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMWKIGVLHLKLDV
II

>gi568815596r:174974612_175230209|GENSCAN_predicted_CDS_5|1989_bp
atggctggcctggagattacatcagcagcagcactggagatcgccaacacatgtccctac
caaagagcatgtttcagtgagaaaccagatgatgattttggagcacagcctaataagaac
ctggggtttgcctcttctttcggcattgttgatgctcttgagagcatcaggcaggacatt
catgtgcaccattgtggcggcacgaaaagatggcggaaagagccaaacgacaaccctttc
attgctcttgacaccccacagtcctatttcacagaggaagagaatgaccagcaagtcaac
ttctactacagagaagcagcaactgataaaaggccaaatcttacaagagaggaagcggga
gaggagcccacgtcgcctgtcacccaatatctccagccgcgcagtcccgaagagtgtaag
atgttcgcctgcgccaagctcgcctgcaccccctctctgatccgagctggatccagagtt
gcatacagaccaatttctgcatcagtgttatctcgaccagaggctagtaggactggagag
ggctctacggtatttaatggggcccagaatggtgtgtctcagctaatccaaagggagttt
cagaccagtgcaatcagcagagacattgatactgctgccaaatttattggtgcaggtgct
gcaacagtaggagtggctggttctggtgctggtattggaacagtctttggcagccttatc
attggttatgccagaactaagttgggtagatgcatcatggaacaagacaggcaaagaaga
ggtctacaagaagtttcctgcgtttgtaaagagaagactgtaaagaattttaggactctt
ggggatattgaggaatgcaaaaaactgcttcccgcccttcgggctccttgtccaatcatg
agcgcccgagtgctctttgatgcccgtcccctctacccgccctgccgaagacccgccttc
ttctccttaagcctgacggaatcacctgactcggaggcgctccctcagaaggaaggcaag
aaggggcgtgtgggtgaaggggaggggcgccagaaggaagcccttggggcgattgtggct
gtgctgccacctcggcggcccgcgcggtgtgggctttgggaacctgactggctgggccgg
accgttaggcaatacaaggacctgtggaatatgagtgatgacaaaccctttctatgtact
gcgcctggatgtggccagcgttttaccaacgaggatcatttggctgtccataaacataaa
catgagatgacactgaaatttggtccagcacgtaatgacagtgtcattgtggctgatcag
accccaacaccaacaagattcttgaaaaactgtgaagaagtgggtttgtttaatgagttg
gcgagtccatttgagaatgaattcaagaaagcttcagaagatgacattaaaaaaatgcct
ctagatttatcccctcttgcaacacctatcataagaagcaaaattgaggagccttctgtt
gtagaaacaactcaccaggatagtcctttacctcacccagagtctactaccagtgatgag
aaggaagtaccattggcacaaactgcacagcccacatcagctattgttcgtccagcatca
ttacaggttcccaatgtgctgcttacaagttctgactcaagtgtaattattcagcaggca
gtaccttcaccaacctcaagtactgtaatcacccaggcaccatcctctaacaggccaatt
gtccctgtaccaggcccatttcctcttctgttacatcttcctaatggacaaaccatgcct
gttgctattcctgcatcaattacaagttctaatgtgcatgttccagctgcagtcccactc
gttcgaccagtcaccatggtgcctagtgttccaggaatcccaggtccttcctctccccaa
ccagtacagtcagaagcaaaaatgtggaaaataggagtattacatctgaaactagatgtg
atcatctga
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