Result of FASTA (omim) for pF1KB3715
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3715, 208 aa
  1>>>pF1KB3715 208 - 208 aa - 208 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6184+/-0.000401; mu= 17.6237+/- 0.025
 mean_var=82.7919+/-16.806, 0's: 0 Z-trim(113.8): 438  B-trim: 1184 in 2/52
 Lambda= 0.140955
 statistics sampled from 22769 (23303) to 22769 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.273), width:  16
 Scan time:  5.650

The best scores are:                                      opt bits E(85289)
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 1348 283.6 1.5e-76
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 1257 265.1 5.7e-71
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 1246 262.9 2.7e-70
XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195) 1193 252.1 4.5e-67
NP_115520 (OMIM: 612909) ras-related protein Rab-6 ( 254) 1130 239.4 3.9e-63
NP_001230648 (OMIM: 179513) ras-related protein Ra ( 175) 1037 220.3 1.5e-57
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215)  559 123.2 3.1e-28
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216)  556 122.6 4.8e-28
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216)  556 122.6 4.8e-28
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216)  556 122.6 4.8e-28
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216)  556 122.6 4.8e-28
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249)  556 122.7 5.2e-28
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215)  522 115.7 5.7e-26
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215)  522 115.7 5.7e-26
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215)  522 115.7 5.7e-26
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215)  522 115.7 5.7e-26
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207)  490 109.2 5.1e-24
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219)  490 109.2 5.3e-24
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225)  489 109.0 6.2e-24
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227)  489 109.0 6.2e-24
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215)  488 108.8 6.9e-24
NP_006859 (OMIM: 605694) ras-related protein Rab-3 ( 195)  486 108.3 8.6e-24
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200)  485 108.1   1e-23
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220)  485 108.2 1.1e-23
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220)  485 108.2 1.1e-23
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212)  483 107.7 1.4e-23
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207)  482 107.5 1.6e-23
NP_065724 (OMIM: 612966) ras-related protein Rab-2 ( 194)  478 106.7 2.7e-23
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201)  474 105.9 4.8e-23
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216)  473 105.7 5.8e-23
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216)  468 104.7 1.2e-22
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219)  468 104.7 1.2e-22
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219)  468 104.7 1.2e-22
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203)  467 104.5 1.3e-22
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205)  464 103.9   2e-22
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228)  461 103.3 3.2e-22
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196)  460 103.0 3.4e-22
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256)  461 103.4 3.5e-22
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223)  460 103.1 3.7e-22
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206)  458 102.6 4.6e-22
XP_016881018 (OMIM: 605694) PREDICTED: ras-related ( 244)  455 102.1 7.9e-22
XP_016881017 (OMIM: 605694) PREDICTED: ras-related ( 248)  455 102.1   8e-22
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215)  453 101.6 9.6e-22
NP_071894 (OMIM: 602206) ras-related protein Rab-1 ( 212)  451 101.2 1.3e-21
NP_055814 (OMIM: 612398) ras-related protein Rab-2 ( 225)  449 100.9 1.7e-21
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190)  442 99.3 4.2e-21
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203)  439 98.8 6.7e-21
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203)  439 98.8 6.7e-21
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203)  439 98.8 6.7e-21
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203)  439 98.8 6.7e-21


>>NP_057661 (OMIM: 615852) ras-related protein Rab-6B [H  (208 aa)
 initn: 1348 init1: 1348 opt: 1348  Z-score: 1495.1  bits: 283.6 E(85289): 1.5e-76
Smith-Waterman score: 1348; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)

               10        20        30        40        50        60
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
              130       140       150       160       170       180

              190       200        
pF1KB3 QEKSKEGMIDIKLDKPQEPPASEGGCSC
       ::::::::::::::::::::::::::::
NP_057 QEKSKEGMIDIKLDKPQEPPASEGGCSC
              190       200        

>>NP_942599 (OMIM: 179513) ras-related protein Rab-6A is  (208 aa)
 initn: 1257 init1: 1257 opt: 1257  Z-score: 1395.1  bits: 265.1 E(85289): 5.7e-71
Smith-Waterman score: 1257; 90.9% identity (99.0% similar) in 208 aa overlap (1-208:1-208)

               10        20        30        40        50        60
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
       ::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
       :::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::::
NP_942 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
       :::::::::::::::..:::::..::::.:::::::::.::::::::::::.::::::..
NP_942 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
              130       140       150       160       170       180

              190       200        
pF1KB3 QEKSKEGMIDIKLDKPQEPPASEGGCSC
       :..:.: ::::::.:::: :.:::::::
NP_942 QDRSREDMIDIKLEKPQEQPVSEGGCSC
              190       200        

>>NP_002860 (OMIM: 179513) ras-related protein Rab-6A is  (208 aa)
 initn: 1246 init1: 1246 opt: 1246  Z-score: 1383.0  bits: 262.9 E(85289): 2.7e-70
Smith-Waterman score: 1246; 89.4% identity (99.0% similar) in 208 aa overlap (1-208:1-208)

               10        20        30        40        50        60
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
       ::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
       :.::::::::::::::::::::::::..:::::::::.::::::.:::::::::::::::
NP_002 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
       :::::::::::::::..:::::..::::.:::::::::.::::::::::::.::::::..
NP_002 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST
              130       140       150       160       170       180

              190       200        
pF1KB3 QEKSKEGMIDIKLDKPQEPPASEGGCSC
       :..:.: ::::::.:::: :.:::::::
NP_002 QDRSREDMIDIKLEKPQEQPVSEGGCSC
              190       200        

>>XP_011511195 (OMIM: 615852) PREDICTED: ras-related pro  (195 aa)
 initn: 1193 init1: 1193 opt: 1193  Z-score: 1325.1  bits: 252.1 E(85289): 4.5e-67
Smith-Waterman score: 1193; 100.0% identity (100.0% similar) in 185 aa overlap (24-208:11-195)

               10        20        30        40        50        60
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
                              :::::::::::::::::::::::::::::::::::::
XP_011              MWHMTRNWPLVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
                            10        20        30        40       

               70        80        90       100       110       120
pF1KB3 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
        50        60        70        80        90       100       

              130       140       150       160       170       180
pF1KB3 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
       110       120       130       140       150       160       

              190       200        
pF1KB3 QEKSKEGMIDIKLDKPQEPPASEGGCSC
       ::::::::::::::::::::::::::::
XP_011 QEKSKEGMIDIKLDKPQEPPASEGGCSC
       170       180       190     

>>NP_115520 (OMIM: 612909) ras-related protein Rab-6C [H  (254 aa)
 initn: 1130 init1: 1130 opt: 1130  Z-score: 1254.5  bits: 239.4 E(85289): 3.9e-63
Smith-Waterman score: 1130; 82.2% identity (93.3% similar) in 208 aa overlap (1-208:1-208)

               10        20        30        40        50        60
pF1KB3 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
       ::::::::::::::::::::::::.:::::::: :::::::::: :::::::::::::: 
NP_115 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
       :. :.:::::::::.::::: :::::..:::::::::.::::::.:::::::::::::::
NP_115 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
       : ::::.::::::::...::::..:: :.: :::: ::.::::::::::::.::::::..
NP_115 ITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST
              130       140       150       160       170       180

              190       200                                        
pF1KB3 QEKSKEGMIDIKLDKPQEPPASEGGCSC                                
       :. :.: : ::::.::::  .:::::::                                
NP_115 QDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKPPYSFIDCSVNIGLNLFPSL
              190       200       210       220       230       240

>>NP_001230648 (OMIM: 179513) ras-related protein Rab-6A  (175 aa)
 initn: 1037 init1: 1037 opt: 1037  Z-score: 1154.2  bits: 220.3 E(85289): 1.5e-57
Smith-Waterman score: 1037; 88.0% identity (98.9% similar) in 175 aa overlap (34-208:1-175)

            10        20        30        40        50        60   
pF1KB3 GGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR
                                     ::::::::::::::::::::::::::::.:
NP_001                               MYDSFDNTYQATIGIDFLSKTMYLEDRTIR
                                             10        20        30

            70        80        90       100       110       120   
pF1KB3 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIML
       :::::::::::::::::::::::..:::::::::.::::::.::::::::::::::::::
NP_001 LQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIML
               40        50        60        70        80        90

           130       140       150       160       170       180   
pF1KB3 VGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEK
       ::::::::::::..:::::..::::.:::::::::.::::::::::::.::::::..:..
NP_001 VGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDR
              100       110       120       130       140       150

           190       200        
pF1KB3 SKEGMIDIKLDKPQEPPASEGGCSC
       :.: ::::::.:::: :.:::::::
NP_001 SREDMIDIKLEKPQEQPVSEGGCSC
              160       170     

>>NP_004153 (OMIM: 179512) ras-related protein Rab-5A is  (215 aa)
 initn: 563 init1: 543 opt: 559  Z-score: 627.8  bits: 123.2 E(85289): 3.1e-28
Smith-Waterman score: 559; 42.2% identity (74.3% similar) in 206 aa overlap (4-207:11-214)

                      10        20        30        40        50   
pF1KB3        MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSK
                 : . :: . .::::.:::..:::.::. ::.  .: .  ..:::  ::..
NP_004 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB3 TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRT
       :. :.: ::....::::::::..:: : : : . .:.::::::: .:: ....:. ... 
NP_004 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KB3 ERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASA
       . . ...: : :::.:::.:: . ..:... : . :..:.::::::..::...:  .:. 
NP_004 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
              130       140       150       160       170       180

             180       190       200        
pF1KB3 LPGME--NVQEKSKEGMIDIKLDKPQEPPASEGGCSC
       ::  :  :   .: .:   . : .: .:  ..  :: 
NP_004 LPKNEPQNPGANSARGR-GVDLTEPTQPTRNQC-CSN
              190        200       210      

>>NP_004574 (OMIM: 604037) ras-related protein Rab-5C is  (216 aa)
 initn: 554 init1: 537 opt: 556  Z-score: 624.5  bits: 122.6 E(85289): 4.8e-28
Smith-Waterman score: 556; 41.5% identity (74.1% similar) in 205 aa overlap (4-208:12-214)

                       10        20        30        40        50  
pF1KB3         MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLS
                  :   :: . .::::.:::..:::.::. ::.  .: .  ..:::  ::.
NP_004 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
               10        20        30        40        50        60

             60        70        80        90       100       110  
pF1KB3 KTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVR
       .:. :.: ::....::::::::..:: : : : . .:.::::::: ..: ....:. ...
NP_004 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
               70        80        90       100       110       120

            120       130       140       150       160       170  
pF1KB3 TERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAS
        . . ...: :.:::.:::.:: . ..:..  : . :..:.::::::..::...:  .:.
NP_004 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
              130       140       150       160       170       180

            180       190       200          
pF1KB3 ALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC  
        ::  :  .  .  :  .  .:  .. :::.. : :  
NP_004 KLPKNEPQNATGAPGR-NRGVDLQENNPASRSQC-CSN
              190        200       210       

>>NP_958842 (OMIM: 604037) ras-related protein Rab-5C is  (216 aa)
 initn: 554 init1: 537 opt: 556  Z-score: 624.5  bits: 122.6 E(85289): 4.8e-28
Smith-Waterman score: 556; 41.5% identity (74.1% similar) in 205 aa overlap (4-208:12-214)

                       10        20        30        40        50  
pF1KB3         MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLS
                  :   :: . .::::.:::..:::.::. ::.  .: .  ..:::  ::.
NP_958 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
               10        20        30        40        50        60

             60        70        80        90       100       110  
pF1KB3 KTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVR
       .:. :.: ::....::::::::..:: : : : . .:.::::::: ..: ....:. ...
NP_958 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
               70        80        90       100       110       120

            120       130       140       150       160       170  
pF1KB3 TERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAS
        . . ...: :.:::.:::.:: . ..:..  : . :..:.::::::..::...:  .:.
NP_958 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
              130       140       150       160       170       180

            180       190       200          
pF1KB3 ALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC  
        ::  :  .  .  :  .  .:  .. :::.. : :  
NP_958 KLPKNEPQNATGAPGR-NRGVDLQENNPASRSQC-CSN
              190        200       210       

>>XP_011523393 (OMIM: 604037) PREDICTED: ras-related pro  (216 aa)
 initn: 554 init1: 537 opt: 556  Z-score: 624.5  bits: 122.6 E(85289): 4.8e-28
Smith-Waterman score: 556; 41.5% identity (74.1% similar) in 205 aa overlap (4-208:12-214)

                       10        20        30        40        50  
pF1KB3         MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLS
                  :   :: . .::::.:::..:::.::. ::.  .: .  ..:::  ::.
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
               10        20        30        40        50        60

             60        70        80        90       100       110  
pF1KB3 KTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVR
       .:. :.: ::....::::::::..:: : : : . .:.::::::: ..: ....:. ...
XP_011 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
               70        80        90       100       110       120

            120       130       140       150       160       170  
pF1KB3 TERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAS
        . . ...: :.:::.:::.:: . ..:..  : . :..:.::::::..::...:  .:.
XP_011 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
              130       140       150       160       170       180

            180       190       200          
pF1KB3 ALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC  
        ::  :  .  .  :  .  .:  .. :::.. : :  
XP_011 KLPKNEPQNATGAPGR-NRGVDLQENNPASRSQC-CSN
              190        200       210       




208 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 21:10:11 2016 done: Thu Nov  3 21:10:12 2016
 Total Scan time:  5.650 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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