GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:39:22

Sequence gi568815588r:101686454_101918022 : 231569 bp : 45.69% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   3021   3112   92  1  2   84   42    91 0.568   1.98
 1.02 PlyA +   3312   3317    6                               1.05

 2.02 PlyA -   3910   3905    6                               1.05
 2.01 Sngl -   8730   7924  807  0  0   94   47   641 0.937  54.41
 2.00 Prom -  16392  16353   40                              -3.66

 3.00 Prom +  21057  21096   40                              -2.96
 3.01 Init +  40718  40769   52  1  1   79   71    64 0.821   5.14
 3.02 Intr +  46531  46657  127  2  1  109   38    88 0.179   5.64
 3.03 Term +  62937  62988   52  0  1  115   39    36 0.010  -1.70
 3.04 PlyA +  65522  65527    6                               1.05

 4.05 PlyA -  66906  66901    6                               1.05
 4.04 Term -  73107  72980  128  1  2  100   53   127 0.987   8.84
 4.03 Intr -  73508  73294  215  1  2   59   77   115 0.865   5.86
 4.02 Intr -  80249  80125  125  2  2  106   90    80 0.625   9.38
 4.01 Init -  80550  80542    9  0  0   69   65     4 0.313  -3.43
 4.00 Prom -  80616  80577   40                              -9.26

 5.06 PlyA -  82022  82017    6                              -1.75
 5.05 Term -  84166  83876  291  1  0   90   43   720 0.999  63.04
 5.04 Intr -  85116  85010  107  1  2   58  100   167 0.857  14.83
 5.03 Intr -  88426  88279  148  1  1   55   99   333 0.814  30.91
 5.02 Intr -  89659  89416  244  0  1   38   76   171 0.356   8.40
 5.01 Init -  91051  91035   17  1  2   94   81    -3 0.539  -0.52
 5.00 Prom -  92888  92849   40                             -10.84

 6.23 PlyA -  94896  94891    6                               1.05
 6.22 Term -  95401  95283  119  2  2   73   41   155 0.992   8.00
 6.21 Intr -  95898  95805   94  0  1   87   77   103 0.999   8.64
 6.20 Intr -  96144  96025  120  0  0   58  101   169 0.994  15.89
 6.19 Intr -  96471  96386   86  1  2   59   77   146 0.972  10.14
 6.18 Intr -  97033  96928  106  1  1  101   41    54 0.494   1.79
 6.17 Intr - 104585 104443  143  0  2   76   75    76 0.451   5.17
 6.16 Intr - 111701 111527  175  2  1   49   82   104 0.881   5.41
 6.15 Intr - 113002 112389  614  2  2   96   87   539 0.916  46.70
 6.14 Intr - 113947 113789  159  2  0   81   73   128 0.867  10.56
 6.13 Intr - 117566 117282  285  0  0  103   80   180 0.981  16.01
 6.12 Intr - 119690 119592   99  0  0   87  111   -19 0.565   0.38
 6.11 Intr - 121448 121277  172  2  1  130   72    -3 0.991   1.82
 6.10 Intr - 123861 123731  131  1  2   42   93   100 0.967   6.31
 6.09 Intr - 131848 131371  478  1  1   65  105   120 0.005   4.02
 6.08 Intr - 141298 141236   63  1  0   71   87    53 0.727   2.41
 6.07 Intr - 141540 141436  105  0  0   63   80   125 0.993   9.61
 6.06 Intr - 141805 141698  108  1  0   92   46   154 0.999  12.08
 6.05 Intr - 142006 141936   71  2  2   58   83    99 0.738   5.30
 6.04 Intr - 142243 142174   70  1  1  123   78    67 0.932   7.95
 6.03 Intr - 142746 142622  125  1  2   98   92   221 0.999  23.80
 6.02 Intr - 144714 144574  141  1  0  110   28    65 0.792   3.02
 6.01 Init - 147916 147814  103  1  1  100   84   153 0.966  14.70
 6.00 Prom - 152757 152718   40                              -5.26

 7.03 PlyA - 153745 153740    6                               1.05
 7.02 Term - 154593 154418  176  1  2   63   48    69 0.427  -1.68
 7.01 Init - 157115 157043   73  2  1   93  100   134 0.995  16.33
 7.00 Prom - 161616 161577   40                              -9.16

 8.04 PlyA - 163017 163012    6                               1.05
 8.03 Term - 163173 163036  138  0  0   53   37   151 0.424   4.46
 8.02 Intr - 163439 163323  117  2  0  110  105   250 0.235  29.56
 8.01 Init - 168816 168814    3  0  0   98   53     0 0.101  -2.50
 8.00 Prom - 169470 169431   40                              -4.06

 9.00 Prom + 177968 178007   40                              -2.46
 9.01 Init + 180903 181103  201  2  0   95   46   155 0.785  10.88
 9.02 Term + 182143 182202   60  0  0  124   39    86 0.996   5.10
 9.03 PlyA + 182925 182930    6                               1.05

10.04 PlyA - 184967 184962    6                               1.05
10.03 Term - 194433 194270  164  1  2   48   43    94 0.134  -1.00
10.02 Intr - 196657 196609   49  1  1   74   75    33 0.159  -1.15
10.01 Intr - 203037 202959   79  2  1   54  115    90 0.481   7.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:101686454_101918022|GENSCAN_predicted_peptide_1|30_aa
XTIKNKAFPNAEDNKYIHIRNHSVNYRTNK

>gi568815588r:101686454_101918022|GENSCAN_predicted_CDS_1|93_bp
naaaccattaaaaataaggcctttccaaacgccgaagacaataaatacatccatattcga
aatcattccgtgaattacagaacaaataagtga

>gi568815588r:101686454_101918022|GENSCAN_predicted_peptide_2|268_aa
MVSPPPGAAAVAARAGLRVGPAPRPLMGSQGRSGPPGNGGPGEGEGGEARKLQEGRVARG
KRRKGKGKGKARAGQGGRGSGAEGKPGPQTAKEAAGPGADAGARACPREEAEGGRSVEEG
ARGIVKGVEGSAGAGKEAQGREYGKKEEWRVRARRREGARPGRAQGRGGQAWADIAGTGV
AMAAAAGEEEEEEEAARESAARPAAGPALWRLPEELLLLICSYLDMRALGRLAQVCRWLR
RFTSCDLLWRRIARASLNSGFTRLGTDL

>gi568815588r:101686454_101918022|GENSCAN_predicted_CDS_2|807_bp
atggtgtcgcctcctcccggggcggcggcggtggcggctcgggctgggctccgcgtcggg
ccggccccgcggccgctcatgggcagccagggccgctcggggccccccgggaacggcggg
cccggcgagggcgagggcggagaggcgaggaagctgcaggaagggagggtggcgaggggg
aagcgaaggaaggggaaggggaagggaaaagcgagagcggggcaaggcggaagaggaagc
ggggcggaagggaagcccgggccgcagacggcgaaggaggcagccgggccgggggctgac
gcgggagcgagggcatgcccaagggaggaagcagagggaggcagaagcgtggaggaaggg
gcgagaggcatcgtcaagggagtcgaggggagcgcaggggccgggaaggaggcacaagga
agagagtatgggaagaaggaggaatggagggtcagggctaggcggcgggagggcgccagg
ccgggaagagcacagggacgagggggtcaggcttgggccgacatcgcggggacaggggtg
gccatggcggcggcggccggggaggaggaggaggaggaggaggcggctcgggagtcggct
gcccgcccggccgcggggcctgcgctctggcgcctgccggaggagctgctgctgctcatc
tgctcctacctggacatgcgggccctcggccgcctggcccaggtgtgccgctggctgcgg
cgcttcaccagctgcgatctgctctggcgccggatagcccgggcctcgctcaactccggc
ttcacgcggctcggcaccgacctgtaa

>gi568815588r:101686454_101918022|GENSCAN_predicted_peptide_3|76_aa
MGIAFLRESNAATDLMGGCVFRLRKKQIPPSSMKMQEAAVACSKHNVIVTGPHGPWCMER
FSLTLMFFPLLHNKPF

>gi568815588r:101686454_101918022|GENSCAN_predicted_CDS_3|231_bp
atggggatcgcattcctacgagaatctaatgccgccactgatctgatgggaggctgtgtc
ttcaggcttaggaaaaagcagatacctcccagtagcatgaagatgcaagaagctgcagtt
gcctgtagcaaacacaacgtgattgtaacaggtccccatggcccttggtgcatggaaagg
ttttccttgactctgatgtttttccccctgctgcacaacaagcccttctga

>gi568815588r:101686454_101918022|GENSCAN_predicted_peptide_4|158_aa
MARTLTSSHLNIPEKRMSVKGGGDFKQGDQEDLVDNFGSEHTPSGDYPNQKLPFGTKLPG
MKPELPLRGSQANWEVAGKGRENLQSTGSLREAVKPEDKRPASGLVLRSCHRLLQKAAST
YSNGLLEQSVMGPPAAMGACTRSAKGGQRRGIAMVTMY

>gi568815588r:101686454_101918022|GENSCAN_predicted_CDS_4|477_bp
atggctaggactctgacatccagccatctcaatattccagagaagaggatgagtgtgaag
ggtggtggcgattttaaacaaggtgatcaggaagaccttgtggataacttcgggtctgag
cacactccatcaggggattatcccaaccagaaacttccatttggaacaaagctcccagga
atgaaacccgagctgccactaagaggctcccaggctaactgggaagtggctgggaaaggg
agggaaaacttgcaaagcactgggagcctcagggaggctgtgaaacctgaagacaaacga
ccagccagcggactggtgctgcggagctgccaccgccttctgcagaaagctgcttccact
tactccaatgggctgctggagcagtcagtcatggggccgccagcagcaatgggggcctgc
acccgctcagccaagggagggcagaggagaggaatagccatggtgaccatgtactga

>gi568815588r:101686454_101918022|GENSCAN_predicted_peptide_5|268_aa
MGHRESQRPPAPAAAHSDSVRRGEHDVPRDPRSRVVIAAGLPHPHPLRSRPAQRVLPRRP
AGRRDPPGSRCPGAARHGQPPLRAELPHVREQSLVTDQLSRRLIRTYQLYSRTSGKHVQV
LANKRINAMAEDGDPFAKLIVETDTFGSRVRVRGAETGLYICMNKKGKLIAKSNGKGKDC
VFTEIVLENNYTALQNAKYEGWYMAFTRKGRPRKGSKTRQHQREVHFMKRLPRGHHTTEQ
SLRFEFLNYPPFTRSLRGSQRTWAPEPR

>gi568815588r:101686454_101918022|GENSCAN_predicted_CDS_5|807_bp
atggggcacagggaaagccagcggccaccggctccggcagcggcgcacagcgattcggtg
cggcgcggcgagcacgacgttccacgggacccgcggagccgcgtcgtgatcgccgccggc
ctcccgcacccgcaccctctccgctcgcgccctgctcagcgcgtcctcccgcggcggccc
gcgggacggcgtgacccgccgggctctcggtgccccggggccgcgcgccatgggcagccc
ccgctccgcgctgagctgcctcatgtgagggagcagagcctggtgacggatcagctcagc
cgccgcctcatccggacctaccaactctacagccgcaccagcgggaagcacgtgcaggtc
ctggccaacaagcgcatcaacgccatggcagaggacggcgaccccttcgcaaagctcatc
gtggagacggacacctttggaagcagagttcgagtccgaggagccgagacgggcctctac
atctgcatgaacaagaaggggaagctgatcgccaagagcaacggcaaaggcaaggactgc
gtcttcacggagattgtgctggagaacaactacacagcgctgcagaatgccaagtacgag
ggctggtacatggccttcacccgcaagggccggccccgcaagggctccaagacgcggcag
caccagcgtgaggtccacttcatgaagcggctgccccggggccaccacaccaccgagcag
agcctgcgcttcgagttcctcaactacccgcccttcacgcgcagcctgcgcggcagccag
aggacttgggcccccgagccccgatag

>gi568815588r:101686454_101918022|GENSCAN_predicted_peptide_6|1188_aa
MNLEGLEMVAVLVVLALFVKVLEQFGLFEPVSLEGHPPGPTKKALKQRFLKLLPCCGPQA
LPSVSESKCLSCASGGGARCVHSVDDEFELSTVCHRPEGLEQLQEQTKFTRKELQVLYRG
FKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDFVAGLSVIL
RGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFF
QKMDRNKDGVVTIEEFIESCQKGTRGHSLALRLGFWRPSLKPRLRLTKGSRRCRRPSHPG
IRVPAEREGEGQRGRGRSRRGAHLELKPSPGLRAGAPTDRGRGGPAEVAAAGGRRMVQKE
SQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRFLCGVV
EEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDD
IDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLR
TVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGP
YKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSI
QIKLENEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGT
PLVAAPSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEET
DHKNDNQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNK
EQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVN
CKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVK
SFVQWLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEDCASPL
MGGAGTGRGSPALCVSGAEFEEGSYSMAAGCELSGHTRSFTFKVEEEDDAEHVLALTMLC
LTEGAKDECNVVEVVARNHDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSGP
VRITGRHQIVTMSNDVSEEESEEEEEDSDEEEVELCPILPAKKQGGRP

>gi568815588r:101686454_101918022|GENSCAN_predicted_CDS_6|3567_bp
atgaacctggaagggctggagatggttgctgtgctcgtggtcctcgctctgtttgtcaag
gtcctggagcagtttggcctctttgagcctgtctccttggaaggccaccctccagggccc
actaaaaaagcgctgaagcagcgattcctcaagctgctgccgtgctgcgggccccaagcc
ctgccctcagtcagtgaaagcaagtgcctctcatgtgcttccgggggcggggctcgatgt
gtgcacagcgtggacgatgaatttgaattgtccaccgtgtgtcaccggcctgagggtctg
gagcagctgcaggagcaaaccaaattcacgcgcaaggagttgcaggtcctgtaccggggc
ttcaagaacgaatgtcccagcggaattgtcaatgaggagaacttcaagcagatttactcc
cagttctttcctcaaggagactccagcacctatgccacttttctcttcaatgcctttgac
accaaccatgatggctcggtcagttttgaggactttgtggctggtttgtccgtgattctt
cggggaactgtagatgacaggcttaattgggccttcaacctgtatgaccttaacaaggac
ggctgcatcaccaaggaggaaatgcttgacatcatgaagtccatctatgacatgatgggc
aagtacacgtaccctgcactccgggaggaggccccaagggaacacgtggagagcttcttc
cagaagatggacagaaacaaggatggtgtggtgaccattgaggaattcattgagtcttgt
caaaagggaacgagaggtcacagcctcgctctccgcttaggcttctggcgccccagctta
aagccgaggctgcggctgacaaagggctcgcgccggtgccgccgcccttctcatccgggc
attcgggtccctgcggagagggagggggaagggcagagggggaggggaaggagccggagg
ggcgcacacttggagctgaagccctctccagggctccgggccggtgccccaacggacaga
ggtcgaggaggacccgcagaggtggcagcggccgggggcaggaggatggtgcagaaggag
agtcaagcgacgttggaggagcgggagagcgagctcagctccaaccctgccgcctctgcg
ggggcatcgctggagccgccggcagctccggcacccggagaagacaaccccgccggggct
gggggagcggcggtggccggggctgcaggaggggctcggcggttcctctgcggtgtggtg
gaagagcaacttatgactctcatctctgctgcacgagaatatgagatagagttcatctat
gcgatctcacctggattggatatcactttttctaaccccaaggaagtatccacattgaaa
cgtaaattggaccaggtttctcagtttgggtgcagatcatttgctttgctttttgatgat
atagaccataatatgtgtgcagcagacaaagaggtattcagttcttttgctcatgcccaa
gtctccatcacaaatgaaatctatcagtacctaggagagccagaaactttcctcttctgt
cccacagaatactgtggcactttctgttatccaaatgtgtctcagtctccatatttaagg
actgtgggtgaaaagcttctacctggaattgaagtgctttggacaggtcccaaagttgtt
tctaaagaaattccagtagagtccatcgaagaggtttctaagattattaagagagctcca
gtaatctgggataacattcatgctaatgattatgatcagaagagactgtttctgggcccg
tacaaaggaagatccacagaactcatcccacggttaaaaggagtcctcactaatccaaat
tgtgaatttgaagccaactacgttgctatccacacccttgccacctggtacaaatcaaac
atgaatggagtgagaaaagatgtagtgatgactgacagtgaagatagtactgtgtccatc
cagataaaattagaaaatgaaggcagtgatgaagatattgaaactgatgtactctatagt
ccacagatggctctaaagctagcattaacagaatggttgcaagagtttggtgtgcctcat
caatacagcagtaggcaagttgcacacagtggagctaaagcaagtgtagttgatgggact
cctttagttgcagcaccctctttaaatgccacaaccgtagtaacaacagtttatcaggag
cccattatgagccagggagcagccttgagtggtgagcctactactctgaccaaggaagaa
gaaaagaaacagcctgatgaagaacccatggacatggtggtggaaaaacaagaagaaacg
gaccacaagaatgacaatcaaatactgagtgaaattgttgaagcgaaaatggcagaggaa
ttgaaaccaatggacactgataaagagagcatagctgaatcaaaatccccagagatgtcc
atgcaagaagattgtattagtgacattgcccccatgcaaactgatgaacagacaaacaag
gagcagtttgtgccaggtccaaatgaaaagcctttgtacactgcggaaccagtgaccctg
gaggatttgcagttacttgctgatctattctaccttccttacgagcatggacccaaagga
gcacagatgttacgggaatttcaatggcttcgagcaaatagtagtgttgtcagtgtcaat
tgcaaaggaaaagactctgaaaaaattgaagaatggcggtcacgagcagccaagtttgaa
gagatgtgtggactagtgatgggaatgttcactcggctctccaattgtgccaacaggaca
attctttatgacatgtactcctatgtttgggatatcaagagtataatgtctatggtgaag
tcttttgtacagtggttagaagatgaagatggcatatgtggttatgccttgggcactgta
gatgtgaccccctttattaaaaaatgtaaaatttcctggatccccttcatgcaggagaag
tataccaagccaaatggtgacaaggaactctctgaggctgaggactgtgcgtctccttta
atgggcggggccggaactggccgagggtccccggctttgtgcgtgtcgggggcggagttt
gaagaaggctcttacagcatggccgccggctgtgagctctccggccacacccgctccttc
acctttaaggtagaggaagaggatgatgcggagcacgtgctggcactaaccatgctctgc
ctcaccgagggagccaaagacgagtgtaatgtggtagaagttgtggcccggaaccatgac
catcaggagatcgcagtccctgtggccaacctcaagctgtcctgccaacccatgctcagt
ctggatgacttccagctccaaccacctgtaaccttccgcctgaagtcgggctctggccct
gtgcggatcactgggcggcaccagattgttacgatgagcaatgatgtttctgaggaggag
agcgaggaagaggaagaggacagtgatgaggaagaagttgagctgtgccccatccttcct
gccaaaaagcaggggggcaggccctag

>gi568815588r:101686454_101918022|GENSCAN_predicted_peptide_7|82_aa
MRGQGRKESLSDSRDLDGSYDQLTARRGRWAVRFRGERPRLAAALSERKRERPREDAERV
GAWLASPELGPPTGISVESLRP

>gi568815588r:101686454_101918022|GENSCAN_predicted_CDS_7|249_bp
atgcggggccagggccgcaaggagagtttgtccgattcccgagacctggacggctcctac
gaccagctcacggcccggcggggccgctgggcagtgcggttccgaggggaaaggccgcgt
ttagcagcggccctgtctgagcggaagagagaaaggccaagagaagatgcggagagggtt
ggagcctggctggctagccctgagctcggtcccccgactgggatctcagtggagtccctc
cggccctga

>gi568815588r:101686454_101918022|GENSCAN_predicted_peptide_8|85_aa
MVLEVVRANYDTLTLKLQDGLDQYERYSEQHKEAAFFKELAVREDAIRGSIAYFSFAAME
TALAQLQLGLGFDVCSQQQIWLIIP

>gi568815588r:101686454_101918022|GENSCAN_predicted_CDS_8|258_bp
atggtgctggaggtggtgagagccaactatgacacgctcacgctgaagctgcaggatggc
ctggaccagtatgagcgctactcagagcagcacaaggaagctgccttcttcaaagagctg
gcagtaagagaagatgctattcgaggtagtattgcctacttctcctttgcagccatggag
acagcccttgcacagctccagctgggcctggggtttgacgtgtgttcccagcagcagatc
tggctcattattccttaa

>gi568815588r:101686454_101918022|GENSCAN_predicted_peptide_9|86_aa
MGAPKMSLIQPPNQRVIKTFKAHYIWYSMQRTVNAVGENPIGENIMKIWKDYNTEDAITV
TEKAMGEPTQHEDDEEDLYDPLPLNE

>gi568815588r:101686454_101918022|GENSCAN_predicted_CDS_9|261_bp
atgggtgccccaaagatgtctctaattcagcctccaaatcagagggtcataaagaccttt
aaggctcattacatatggtactctatgcaaaggactgtcaatgctgtgggagaaaaccca
attggagagaatatcatgaaaatctggaaggattacaacactgaagatgccatcactgtt
acagaaaaagccatgggcgagcctactcaacatgaagatgatgaggaagatctttatgac
ccacttccacttaatgaatag

>gi568815588r:101686454_101918022|GENSCAN_predicted_peptide_10|97_aa
XAIINHFNPKIESYAAVNHISQLSEEQEKDFDIISCIILEMHPQRIEALIRGEPQFVGNN
IVRGPGWHPLRENIQEKNRKILGKGPENTKTYEENGA

>gi568815588r:101686454_101918022|GENSCAN_predicted_CDS_10|294_bp
nnagccatcatcaaccactttaaccccaaaattgagtcctacgctgctgtgaatcacata
tcccaactgtcagaggagcaggaaaaagattttgatattatcagctgcatcatattagaa
atgcatccacaaaggatcgaagcactcataagaggagaaccccagtttgtggggaacaac
attgttaggggccctgggtggcatccattacgtgagaacatccaggagaagaacagaaag
atcttggggaaagggccagagaacacaaagacttatgaggaaaatggagcctga