Result of GENSCAN for pF1KB9390
GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:24:13

Sequence gi568815583f:62948576_63169940 : 221365 bp : 44.42% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4598   4934  337  1  1  100   45   306 0.279  24.94
 1.02 Term +   5201   5583  383  0  2   24   38   227 0.318   6.30
 1.03 PlyA +   5879   5884    6                               1.05

 2.00 Prom +   6604   6643   40                              -4.26
 2.01 Init +   6660   6737   78  2  0   74  100    -1 0.186   0.77
 2.02 Intr +  13456  13615  160  0  1   25   77    90 0.276   1.16
 2.03 Intr +  13724  13771   48  0  0  104   77    30 0.143   2.15
 2.04 Intr +  20205  20317  113  1  2  105   56    74 0.729   6.00
 2.05 Intr +  27087  27190  104  2  2   96   72    50 0.381   3.17
 2.06 Intr +  36293  36343   51  2  0   36   75    91 0.014   0.62
 2.07 Intr +  41387  41508  122  2  2  147   28    29 0.059   2.94
 2.08 Intr +  46965  47016   52  1  1  105   55    32 0.010  -0.43
 2.09 Intr +  58414  58485   72  1  0   29   99    69 0.007   0.62
 2.10 Intr +  62774  62911  138  2  0   16   55   147 0.044   3.78
 2.11 Intr +  68410  68531  122  1  2   56   76    78 0.070   3.54
 2.12 Intr +  71630  71730  101  0  2  102   72   -12 0.047  -1.57
 2.13 Term +  72519  72635  117  2  0   61   41   132 0.321   4.34
 2.14 PlyA +  73091  73096    6                               1.05

 3.00 Prom +  74390  74429   40                              -7.86
 3.01 Init +  77884  77947   64  0  1   92  103    20 0.848   5.21
 3.02 Term +  83754  83833   80  1  2   94   42    96 0.513   3.53
 3.03 PlyA +  84317  84322    6                               1.05

 4.00 Prom +  89714  89753   40                              -3.76
 4.01 Init +  93595  93667   73  0  1   66   13   147 0.908   4.32
 4.02 Intr +  94229  94368  140  0  2   81   46   293 0.938  24.58
 4.03 Intr +  95131  95256  126  0  0   71   75   345 0.994  32.38
 4.04 Intr +  95452  95577  126  0  0   66   95   222 0.999  21.58
 4.05 Intr +  98952  99064  113  2  2   32   61    46 0.112  -4.52
 4.06 Intr +  99823 100132  310  1  1   62   75   267 0.245  19.12
 4.07 Intr + 104076 104144   69  2  0   86   50    71 0.520   2.48
 4.08 Intr + 108410 108543  134  1  2   92   78   194 0.999  18.24
 4.09 Intr + 110988 111105  118  0  1  104   55   226 0.998  21.37
 4.10 Intr + 112294 112364   71  0  2  104   98   133 0.999  13.88
 4.11 Intr + 112623 112698   76  0  1   69   79    69 0.934   3.62
 4.12 Intr + 113640 113702   63  2  0   69   75   110 0.986   6.71
 4.13 Intr + 114001 114070   70  0  1   50  116    25 0.996   0.25
 4.14 Term + 115489 115571   83  2  2   69   41   204 0.999  11.66
 4.15 PlyA + 115618 115623    6                               1.05

 5.00 Prom + 119895 119934   40                              -4.66
 5.01 Init + 127728 127733    6  2  0   72  115     8 0.074   2.35
 5.02 Intr + 133214 133319  106  1  1   61   80    56 0.010   1.89
 5.03 Term + 156166 156269  104  2  2   86   54    97 0.184   4.54
 5.04 PlyA + 159272 159277    6                               1.05

 6.00 Prom + 164507 164546   40                              -0.06
 6.01 Init + 173297 173653  357  1  0   79   86   349 0.921  28.91
 6.02 Intr + 174061 174127   67  0  1   95   98     6 0.945   0.78
 6.03 Intr + 178284 178474  191  1  2  117   79   184 0.989  19.70
 6.04 Intr + 178778 179114  337  1  1   58  105   236 0.966  17.39
 6.05 Intr + 180910 181075  166  2  1   35   94    63 0.754   0.62
 6.06 Term + 192705 193230  526  0  1  103   44   190 0.924   9.84
 6.07 PlyA + 193313 193318    6                               1.05

 7.00 Prom + 199324 199363   40                              -2.76
 7.01 Init + 209157 209249   93  2  0   87   45   112 0.766   5.18
 7.02 Term + 209538 209591   54  2  0   76   47    96 0.795   1.86
 7.03 PlyA + 210420 210425    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:62948576_63169940|GENSCAN_predicted_peptide_1|239_aa
MSSEAETQQPPPAPALSSTYTKPGTTGSGAGNGVLGGLTPTAPAGGDKKVIATKVLGTVK
WFNVRNRYGFINRNDTKEDVFVPQTAIENNPRKYLPRVDRETMEFDVVEGEKAFQPVQGE
VMEGAGNQGAGEQRRPMRQNMCWGYRPRFRRGPPRPKQPREDGNEEDKENQGGDTQGQQP
PQRRYLRNFNYRRRRPENPKPQDGKETKAADPPVENSSTPEAEQGRLSKCRLHLYQHTV

>gi568815583f:62948576_63169940|GENSCAN_predicted_CDS_1|720_bp
atgagcagcgaggcggagacccagcagccgccgcccgcccccgccctcagctccacctac
accaagcccggcactacgggcagcggcgcagggaacggtgtcctgggcggcctcacaccg
acggcgcctgccggcggggacaagaaagtcatcgcaacgaaggttttgggaacagtaaaa
tggttcaatgtaaggaacagatatggtttcatcaacaggaatgacaccaaggaagatgta
tttgtaccccagactgccatagagaataaccccaggaagtaccttcccagggtagatagg
gagactatggagtttgatgttgttgaaggagaaaaggcattccaacctgtgcagggagaa
gtgatggagggtgctggcaaccagggtgcaggagaacaacgtagaccaatgaggcagaat
atgtgttggggatatagaccacggttccgcaggggccctcctcgcccaaaacagcctaga
gaggacggcaatgaagaagataaagaaaatcaaggaggtgacacccaaggtcagcagcca
cctcaacgtcggtacctccgcaacttcaattaccgacgcagacgcccagaaaaccctaaa
ccacaagatggcaaagagacaaaagcagcagatccaccagttgagaattcgtccactccg
gaggctgagcagggcaggctgagtaaatgccggcttcatctctaccaacatacagtttag

>gi568815583f:62948576_63169940|GENSCAN_predicted_peptide_2|425_aa
MGETTPMIQLPPPGPALYMWGSLQFKALEAAGGFVGSCLLLENGFAVSSDLVWGVHSHLS
DILAEAKEQFTLGANIPWQGLALAEPTGLVLQGGSGLPGKPRDPEQFRTREEKSLENYTS
VTRDSSYASICENASPWQTAPPFSALPRPLFLPLYDCLVFLEMAFCDGSIEHKWISEEDG
EDTSRALSPLPPGPSHPYSLGPRYHPFHTHSSPHREGRDQCVGIKVNIYLFIVCSMEQHA
LLCSPAKREARLGNATYPSTSKSQCDCLPMKRKLSEACVEPALKQSRKTERLCTREYPIR
YPSQGTKAMFGFHVVTGFPRNYLSRKPRKKPQCLSDLALEVTRHHIYCPIVHTGSKSCKS
STHSVPLLSLEIDLTIMPPCNVLASGLDSELSIGTAQPITLNTTRMSNTIQAPEKRFSVS
LVLCL

>gi568815583f:62948576_63169940|GENSCAN_predicted_CDS_2|1278_bp
atgggtgaaacgacccccatgatccaattacctccacctggtcccgccctttacatgtgg
ggatcattacaattcaaggccctggaagctgctggaggttttgtgggcagctgcctcctc
ctagaaaatggctttgctgtcagttctgacctggtgtggggagtacactcacacctatca
gacatcttagcagaggctaaggagcaatttactctgggcgccaacattccctggcaagga
ctagctctggccgagcccacaggactggtgttgcagggaggaagtggtctccctggaaag
ccacgtgatccagagcagtttcgaaccagagaagagaaaagcctggagaattacaccagt
gtaactagagattcttcttatgcatcaatatgcgaaaatgcctctccctggcagacggcc
ccgcccttctccgcactccctaggcctttgttcctacctctgtacgactgcctcgtcttc
ctggagatggcattctgtgatgggtcaattgagcacaaatggatctccgaggaagatggt
gaagacacatcaagggccctgtcacccctaccgcctgggccctctcacccctacagcctg
ggccctcgttaccaccccttccacactcacagcagcccacaccgggaaggaagagatcag
tgtgtcggcattaaggtgaacatttatttattcatcgtctgcagcatggagcagcatgcc
ctgctctgtagtccagcaaagagagaggcccgactagggaatgccacatacccatcaact
tccaagagccagtgcgactgtcttcccatgaaaagaaaactcagtgaagcttgtgtggag
ccagccctgaagcagtcacgaaaaactgagagactttgcaccagggagtacccaatacga
taccccagtcaaggaacaaaggccatgtttggcttccatgtggtgacaggcttcccccgc
aactacctatccaggaaaccaaggaagaagccgcaatgcctctccgacctagctctggaa
gtcacgcgtcatcacatctactgtcccattgttcacacaggctcaaagagttgcaaatct
tccacacactcggtaccccttttaagtttagaaattgacctaacaataatgcctccttgc
aatgtccttgcaagtggcctggattcagaactcagcatcggcacagcacaaccaataacc
ctaaacaccactcggatgagtaacaccattcaggccccagagaaacgcttctccgtgtct
cttgtcctgtgtctgtga

>gi568815583f:62948576_63169940|GENSCAN_predicted_peptide_3|47_aa
MGVGDKIEETSIGGLGGQCRNAEKILAAGFPIAVNNVQLQDIVTVLF

>gi568815583f:62948576_63169940|GENSCAN_predicted_CDS_3|144_bp
atgggcgtgggggacaagatagaggagaccagtattggaggattaggaggtcaatgtaga
aatgctgagaagatcctggctgctggctttcctattgctgttaacaatgtacaactacaa
gatatcgtgactgtacttttttaa

>gi568815583f:62948576_63169940|GENSCAN_predicted_peptide_4|523_aa
MTPGWLRAAGEALAGAESALTLTRAPGPLAAATMDAIKKKMQMLKLDKENALDRAEQAEA
DKKAAEDRSKQLEEDIAAKEKLLRVSEDERDRVLEELHKAEDSLLAAEEAAAKLEDELVS
LQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDASQSSPGLTGFQEISEAGLTPKKAV
KRRDHLDDCFHGNPGGCDFRTAPGRRGRRHRTERPGRGGPALGSQDSRGSRVRRAAAGLS
HCSPPARLPSGAMAGSSSLEAVRRKIRSLQEQADAAEERAGTLQRELDHERKLRETITDG
HVSMGLYRQRQQQVLKTPQAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAAD
ESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEE
RAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVLSDKLKEAETRAEF
AERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM

>gi568815583f:62948576_63169940|GENSCAN_predicted_CDS_4|1572_bp
atgacacctggctggctgagagctgccggggaggcgctggcgggtgccgagagcgcactg
accctgacgcgggccccagggcccctcgccgccgccaccatggacgccatcaagaagaag
atgcagatgctgaagctcgacaaggagaacgccttggatcgagctgagcaggcggaggcc
gacaagaaggcggcggaagacaggagcaagcagctcgaggaggacatcgcggccaaggag
aagttgctgcgggtgtcggaggacgagcgggaccgggtgctggaggagctgcacaaggcg
gaggacagcctcctggccgccgaagaggccgccgccaagctggaagatgagctggtgtca
ctgcaaaagaaactcaagggcaccgaagatgaactggacaaatactctgaggctctcaaa
gatgcccaggagaagctggagctggcagagaaaaaggccaccgatgcatcccagtccagc
ccaggactgactggattccaggagatctcagaggctggtctgacaccaaagaaggctgta
aagagaagagaccatttggatgactgttttcatggaaaccctggaggctgcgacttccgg
actgctcctggccgcagggggcgccgccatcgcacagagaggcctgggcggggcggaccg
gcgctgggcagccaggacagccgcggcagccgggtccgcagggcagcagccggcctctcc
cactgcagccctcccgcccgcctaccgtccggcgcgatggcggggagtagctcgctggag
gcggtgcgcaggaagatccggagcctgcaggagcaggcggacgccgctgaggagcgcgcg
ggcaccctgcagcgcgagctggaccacgagaggaagctgagggagaccataacagatggt
catgtgtctatgggcttgtaccggcagaggcaacagcaggtccttaagactccccaggct
gaagccgacgtagcttctctgaacagacgcatccagctggttgaggaagagttggatcgt
gcccaggagcgtctggcaacagctttgcagaagctggaggaagctgagaaggcagcagat
gagagtgagagaggcatgaaagtcattgagagtcgagcccaaaaagatgaagaaaaaatg
gaaattcaggagatccaactgaaagaggccaagcacattgctgaagatgccgaccgcaaa
tatgaagaggtggcccgtaagctggtcatcattgagagcgacctggaacgtgcagaggag
cgggctgagctctcagaaggccaagtccgacagctggaagaacaattaagaataatggat
cagaccttgaaagcattaatggctgcagaggataagtactcgcagaaggaagacagatat
gaggaagagatcaaggtcctttccgacaagctgaaggaggctgagactcgggctgagttt
gcggagaggtcagtaactaaattggagaaaagcattgatgacttagaagacgagctgtac
gctcagaaactgaagtacaaagccatcagcgaggagctggaccacgctctcaacgatatg
acttccatgtaa

>gi568815583f:62948576_63169940|GENSCAN_predicted_peptide_5|71_aa
MMATTPPFPTLRAISITTTIDRMKTCRPLLYCMCFVAGYSKVVAVHKPGKRALILVDYTG
TLIPDFKPPEP

>gi568815583f:62948576_63169940|GENSCAN_predicted_CDS_5|216_bp
atgatggccaccaccccacctttccccacactcagagccatcagcatcaccaccaccatt
gatcgtatgaagacatgcagaccacttttatactgcatgtgctttgttgcaggatacagc
aaggtggtggctgtccacaagcctggaaagagagcgctcatattagttgactacactggc
actcttatcccagacttcaagcctccagaaccgtga

>gi568815583f:62948576_63169940|GENSCAN_predicted_peptide_6|547_aa
MYRLMSAVTARAAAPGGLASSCGRRGVHQRAGLPPLGHGWVGGLGLGLGLALGVKLAGGL
RGAAPAQSPAAPDPEASPLAEPPQEQSLAPWSPQTPAPPCSRCFARAIESSRDLLHRIKD
EVGAPGIVVGVSVDGKEVWSEGLGYADVENRVPCKPETVMRIASISKSLTMVALAKLWEA
GKLDLDIPVQHYVPEFPEKEYEGEKVSVTTRLLISHLSGIRHYEKDIKKVKEEKAYKALK
MMKENVAFEQEKEGKSNEKNDFTKFKTEQENEAKCRNSKPGKKKNDFEQGELYLREKFEN
SIESLRLFKNDPLFFKPGSQFLYSTFGYTLLAAIVERASGCKYLDYMQKIFHDLDMLTTV
QEENEPVIYNRARFYVYNKKKRLVNTPYVDNSYKWAGGGFLSTVGDLLKFGNAMLYGYQV
GLFKNSNENLLPGYLKPETMVMMWTPVPNTEMSWDKEGKYAMAWGVVERKQTYGSCRKQR
HYASHTGGAVGASSVLLVLPEELDTETINNKVPPRGIIVSIICNMQSVGLNSTALKIALE
FDKDRSD

>gi568815583f:62948576_63169940|GENSCAN_predicted_CDS_6|1644_bp
atgtaccggctcatgtcagcagtgactgcccgggctgccgcccccgggggcttggcctca
agctgcggacgacgcggggtccatcagcgcgccgggctgccgcctctcggccacggctgg
gtcgggggcctcgggctggggctggggctggcgctcggggtgaagctggcaggtgggctg
aggggcgcggccccggcgcagtcccccgcggcccccgaccctgaggcgtcgcctctggcc
gagccgccacaggagcagtccctcgccccgtggtctccgcagaccccggcgccgccctgc
tccaggtgcttcgccagagccatcgagagcagccgcgacctgctgcacaggatcaaggat
gaggtgggcgcaccgggcatagtggttggagtttctgtagatggaaaagaagtctggtca
gaaggtttaggttatgctgatgttgagaaccgtgtaccatgtaaaccagagacagttatg
cgaattgctagcatcagcaaaagtctcaccatggttgctcttgccaaattgtgggaagca
gggaaactggatcttgatattccagtacaacattatgttcccgaattcccagaaaaagaa
tatgaaggtgaaaaggtttctgtcacaacaagattactgatttcccatttaagtggaatt
cgtcattatgaaaaggacataaaaaaggtgaaagaagagaaagcttataaagccttgaag
atgatgaaagagaatgttgcatttgagcaagaaaaagaaggcaaaagtaatgaaaagaat
gattttactaaatttaaaacagagcaggagaatgaagccaaatgccggaattcaaaacct
ggcaagaaaaagaatgattttgaacaaggcgaattatatttgagagaaaagtttgaaaat
tcaattgaatccctaagattatttaaaaatgatcctttgttcttcaaacctggtagtcag
tttttgtattcaacttttggctataccctactggcagccatagtagagagagcttcagga
tgtaaatatttggactatatgcagaaaatattccatgacttggatatgctgacgactgtg
caggaagaaaacgagccagtgatttacaatagagcaagattttatgtttacaataaaaag
aaacgtcttgtcaacacaccttacgtggataactcctataaatgggctggtggtggattt
ctgtctacagtgggtgaccttctgaaatttgggaatgcaatgctttatggttaccaagtt
gggctgtttaagaactcaaatgaaaatcttttacctggatacctcaaaccagaaacaatg
gttatgatgtggaccccagtccctaacacagagatgtcttgggataaagagggtaaatat
gcaatggcgtggggtgttgtggaaaggaaacaaacgtatggttcgtgtagaaagcaacgg
cattatgcttcacatactggaggggcagtgggtgccagtagtgtcctgctggtccttcct
gaagaactggatacagagactataaataacaaggttcccccaagaggaatcattgtttct
atcatatgtaacatgcaatctgttggcctcaatagcaccgctttgaagattgcccttgaa
tttgataaagacagatcagactga

>gi568815583f:62948576_63169940|GENSCAN_predicted_peptide_7|48_aa
MARERPRPPGPAPPRNPAGRSAPGPLARPLSSGQLGGLRKANVTDDRT

>gi568815583f:62948576_63169940|GENSCAN_predicted_CDS_7|147_bp
atggcgagggagcgcccgcggccaccggggccggcgccaccccggaacccggcgggccgc
tcagcccccggccccctggcccggccgctctcgagtggacaactagggggcctgagaaag
gcgaatgtcaccgatgaccgaacatga
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