Result of FASTA (omim) for pF1KB5302
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5302, 309 aa
  1>>>pF1KB5302 309 - 309 aa - 309 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2251+/-0.000354; mu= 16.0973+/- 0.022
 mean_var=61.9292+/-12.197, 0's: 0 Z-trim(114.1): 49  B-trim: 170 in 1/52
 Lambda= 0.162977
 statistics sampled from 23670 (23721) to 23670 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.668), E-opt: 0.2 (0.278), width:  16
 Scan time:  6.740

The best scores are:                                      opt bits E(85289)
NP_002706 (OMIM: 176915) serine/threonine-protein  ( 309) 2157 515.6 5.1e-146
NP_001009552 (OMIM: 176916) serine/threonine-prote ( 309) 2123 507.6 1.3e-143
NP_001290432 (OMIM: 602035) serine/threonine-prote ( 307) 1465 352.9 4.9e-97
NP_002711 (OMIM: 602035) serine/threonine-protein  ( 307) 1465 352.9 4.9e-97
NP_002712 (OMIM: 612725) serine/threonine-protein  ( 305) 1241 300.2 3.5e-81
XP_011517149 (OMIM: 612725) PREDICTED: serine/thre ( 293) 1186 287.2 2.6e-77
NP_001116827 (OMIM: 612725) serine/threonine-prote ( 342) 1186 287.3   3e-77
XP_016878893 (OMIM: 602035) PREDICTED: serine/thre ( 228) 1117 271.0 1.6e-72
XP_016878892 (OMIM: 602035) PREDICTED: serine/thre ( 228) 1117 271.0 1.6e-72
NP_001290435 (OMIM: 602035) serine/threonine-prote ( 228) 1117 271.0 1.6e-72
NP_001290436 (OMIM: 602035) serine/threonine-prote ( 228) 1117 271.0 1.6e-72
NP_001290433 (OMIM: 602035) serine/threonine-prote ( 273) 1008 245.4 9.8e-65
XP_006721124 (OMIM: 602035) PREDICTED: serine/thre ( 273) 1008 245.4 9.8e-65
NP_002701 (OMIM: 176914) serine/threonine-protein  ( 323) 1002 244.0   3e-64
XP_011536807 (OMIM: 176914) PREDICTED: serine/thre ( 330) 1002 244.0 3.1e-64
NP_001231903 (OMIM: 176914) serine/threonine-prote ( 337) 1002 244.0 3.1e-64
XP_011536806 (OMIM: 176914) PREDICTED: serine/thre ( 362) 1002 244.0 3.3e-64
NP_002699 (OMIM: 176875) serine/threonine-protein  ( 330)  991 241.4 1.8e-63
NP_001008709 (OMIM: 176875) serine/threonine-prote ( 341)  991 241.4 1.9e-63
NP_996759 (OMIM: 600590) serine/threonine-protein  ( 327)  967 235.8 9.1e-62
NP_002700 (OMIM: 600590) serine/threonine-protein  ( 327)  967 235.8 9.1e-62
NP_001116841 (OMIM: 612725) serine/threonine-prote ( 283)  930 227.0 3.4e-59
NP_996756 (OMIM: 176875) serine/threonine-protein  ( 286)  895 218.8   1e-56
NP_006238 (OMIM: 600658) serine/threonine-protein  ( 499)  783 192.6 1.4e-48
XP_016882424 (OMIM: 600658) PREDICTED: serine/thre ( 551)  775 190.7 5.5e-48
NP_001191213 (OMIM: 600658) serine/threonine-prote ( 477)  739 182.2 1.7e-45
NP_001124164 (OMIM: 114105) serine/threonine-prote ( 469)  697 172.4 1.6e-42
XP_016863854 (OMIM: 114105) PREDICTED: serine/thre ( 509)  697 172.4 1.7e-42
NP_001124163 (OMIM: 114105) serine/threonine-prote ( 511)  697 172.4 1.7e-42
NP_000935 (OMIM: 114105) serine/threonine-protein  ( 521)  697 172.4 1.8e-42
XP_016871868 (OMIM: 114106) PREDICTED: serine/thre ( 426)  677 167.6 3.8e-41
XP_005270001 (OMIM: 114106) PREDICTED: serine/thre ( 514)  677 167.7 4.5e-41
NP_001135826 (OMIM: 114106) serine/threonine-prote ( 515)  677 167.7 4.5e-41
NP_066955 (OMIM: 114106) serine/threonine-protein  ( 524)  677 167.7 4.6e-41
NP_001135825 (OMIM: 114106) serine/threonine-prote ( 525)  677 167.7 4.6e-41
NP_001276898 (OMIM: 114106) serine/threonine-prote ( 410)  661 163.9   5e-40
XP_016869100 (OMIM: 114107) PREDICTED: serine/thre ( 418)  661 163.9 5.1e-40
NP_001230904 (OMIM: 114107) serine/threonine-prote ( 502)  661 163.9   6e-40
NP_005596 (OMIM: 114107) serine/threonine-protein  ( 512)  661 163.9 6.1e-40
NP_001230903 (OMIM: 114107) serine/threonine-prote ( 521)  661 163.9 6.2e-40
XP_016869099 (OMIM: 114107) PREDICTED: serine/thre ( 439)  644 159.9 8.5e-39
XP_011530341 (OMIM: 602256) PREDICTED: serine/thre ( 753)  367 94.9 5.5e-19
NP_006230 (OMIM: 602256) serine/threonine-protein  ( 753)  367 94.9 5.5e-19
NP_689412 (OMIM: 300109) serine/threonine-protein  ( 591)  322 84.2 6.8e-16
NP_001276897 (OMIM: 114106) serine/threonine-prote ( 514)  279 74.1 6.7e-13
XP_016885101 (OMIM: 300109) PREDICTED: serine/thre ( 563)  225 61.4 4.8e-09
NP_006231 (OMIM: 300109) serine/threonine-protein  ( 653)  225 61.5 5.4e-09
XP_005274610 (OMIM: 300109) PREDICTED: serine/thre ( 653)  225 61.5 5.4e-09
NP_689410 (OMIM: 300109) serine/threonine-protein  ( 625)  218 59.8 1.6e-08


>>NP_002706 (OMIM: 176915) serine/threonine-protein phos  (309 aa)
 initn: 2157 init1: 2157 opt: 2157  Z-score: 2742.4  bits: 515.6 E(85289): 5.1e-146
Smith-Waterman score: 2157; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:1-309)

               10        20        30        40        50        60
pF1KB5 MDEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MDEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 HQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 HQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHV
              250       260       270       280       290       300

                
pF1KB5 TRRTPDYFL
       :::::::::
NP_002 TRRTPDYFL
                

>>NP_001009552 (OMIM: 176916) serine/threonine-protein p  (309 aa)
 initn: 2123 init1: 2123 opt: 2123  Z-score: 2699.2  bits: 507.6 E(85289): 1.3e-143
Smith-Waterman score: 2123; 97.4% identity (99.7% similar) in 309 aa overlap (1-309:1-309)

               10        20        30        40        50        60
pF1KB5 MDEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHG
       ::.:.::::::::.:::::::::.:.::..::::::::::::::::::::::::::::::
NP_001 MDDKAFTKELDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES
       ::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
NP_001 QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHES
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 HQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHV
              250       260       270       280       290       300

                
pF1KB5 TRRTPDYFL
       :::::::::
NP_001 TRRTPDYFL
                

>>NP_001290432 (OMIM: 602035) serine/threonine-protein p  (307 aa)
 initn: 1464 init1: 1442 opt: 1465  Z-score: 1863.1  bits: 352.9 E(85289): 4.9e-97
Smith-Waterman score: 1465; 66.7% identity (86.8% similar) in 303 aa overlap (9-309:6-307)

               10        20        30        40        50        60
pF1KB5 MDEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHG
               .::. :::: .:. ..::.::.:: ::.:::..:::::.:  :::::::.::
NP_001    MAEISDLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHG
                  10        20        30        40        50       

               70        80        90       100       110       120
pF1KB5 QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES
       ::.:: ::::.::  :.::::::::.::::.:::::  ::.:::::: .:::..::::::
NP_001 QFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHES
        60        70        80        90       100       110       

              130       140       150       160       170       180
pF1KB5 RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHI
       ::::::::::::::::::...::.: :..:::: :.:..::.:::.::::::::.:::.:
NP_001 RQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQI
       120       130       140       150       160       170       

              190       200       210       220       230       240
pF1KB5 RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
       :..:: :::::.:::::::::::.:  :::.::::::: ::.:.   :: :: . .. ::
NP_001 RTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRA
       180       190       200       210       220       230       

              250       260       270       280       290          
pF1KB5 HQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPR--RGEP
       ::::::::.:  ...:.:..::::::::::: :::.:::. :. .:. :. ::.  :: :
NP_001 HQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETRGIP
       240       250       260       270       280       290       

      300         
pF1KB5 HVTRRTPDYFL
          . . ::::
NP_001 S-KKPVADYFL
        300       

>>NP_002711 (OMIM: 602035) serine/threonine-protein phos  (307 aa)
 initn: 1464 init1: 1442 opt: 1465  Z-score: 1863.1  bits: 352.9 E(85289): 4.9e-97
Smith-Waterman score: 1465; 66.7% identity (86.8% similar) in 303 aa overlap (9-309:6-307)

               10        20        30        40        50        60
pF1KB5 MDEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHG
               .::. :::: .:. ..::.::.:: ::.:::..:::::.:  :::::::.::
NP_002    MAEISDLDRQIEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHG
                  10        20        30        40        50       

               70        80        90       100       110       120
pF1KB5 QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES
       ::.:: ::::.::  :.::::::::.::::.:::::  ::.:::::: .:::..::::::
NP_002 QFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHES
        60        70        80        90       100       110       

              130       140       150       160       170       180
pF1KB5 RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHI
       ::::::::::::::::::...::.: :..:::: :.:..::.:::.::::::::.:::.:
NP_002 RQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQI
       120       130       140       150       160       170       

              190       200       210       220       230       240
pF1KB5 RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
       :..:: :::::.:::::::::::.:  :::.::::::: ::.:.   :: :: . .. ::
NP_002 RTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRA
       180       190       200       210       220       230       

              250       260       270       280       290          
pF1KB5 HQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPR--RGEP
       ::::::::.:  ...:.:..::::::::::: :::.:::. :. .:. :. ::.  :: :
NP_002 HQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETRGIP
       240       250       260       270       280       290       

      300         
pF1KB5 HVTRRTPDYFL
          . . ::::
NP_002 S-KKPVADYFL
        300       

>>NP_002712 (OMIM: 612725) serine/threonine-protein phos  (305 aa)
 initn: 1240 init1: 1240 opt: 1241  Z-score: 1578.5  bits: 300.2 E(85289): 3.5e-81
Smith-Waterman score: 1241; 58.4% identity (79.9% similar) in 303 aa overlap (9-309:5-305)

               10        20        30        40        50        60
pF1KB5 MDEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHG
               .::...:    :: : :...: ::. . ..: .::::: :  :::::::.::
NP_002     MAPLDLDKYVEIARLCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHG
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KB5 QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES
       ::.:: :::: ::. :::::.::::.:::::::.:: : :.:::... .:::.:::::::
NP_002 QFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHES
         60        70        80        90       100       110      

              130       140       150       160       170       180
pF1KB5 RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHI
       :::::::::::::  ::::::.:.: : .::.: ..::.: ::.:.::::::.: :::.:
NP_002 RQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQI
        120       130       140       150       160       170      

              190       200       210       220       230       240
pF1KB5 RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
       :...: ::.::.: .:::.::::.:   :.:::::::. ::  ... : : :.: :. ::
NP_002 RTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRA
        180       190       200       210       220       230      

              250       260       270       280         290        
pF1KB5 HQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDD--TLKYSFLQFDPAPRRGEP
       :::: :::..  :...::..::::::::::: :.:: . :  : . ....  :  .:  :
NP_002 HQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIP
        240       250       260       270       280       290      

      300         
pF1KB5 HVTRRTPDYFL
          : :  :::
NP_002 --PRTTTPYFL
          300     

>>XP_011517149 (OMIM: 612725) PREDICTED: serine/threonin  (293 aa)
 initn: 1185 init1: 1185 opt: 1186  Z-score: 1508.9  bits: 287.2 E(85289): 2.6e-77
Smith-Waterman score: 1186; 60.1% identity (80.8% similar) in 281 aa overlap (31-309:15-293)

               10        20        30        40        50        60
pF1KB5 MDEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHG
                                     ::. . ..: .::::: :  :::::::.::
XP_011                 MFLLPRLQLLGQMRLCDYVCDLLLEESNVQPVSTPVTVCGDIHG
                               10        20        30        40    

               70        80        90       100       110       120
pF1KB5 QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES
       ::.:: :::: ::. :::::.::::.:::::::.:: : :.:::... .:::.:::::::
XP_011 QFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHES
           50        60        70        80        90       100    

              130       140       150       160       170       180
pF1KB5 RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHI
       :::::::::::::  ::::::.:.: : .::.: ..::.: ::.:.::::::.: :::.:
XP_011 RQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQI
          110       120       130       140       150       160    

              190       200       210       220       230       240
pF1KB5 RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
       :...: ::.::.: .:::.::::.:   :.:::::::. ::  ... : : :.: :. ::
XP_011 RTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRA
          170       180       190       200       210       220    

              250       260       270       280         290        
pF1KB5 HQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDD--TLKYSFLQFDPAPRRGEP
       :::: :::..  :...::..::::::::::: :.:: . :  : . ....  :  .:  :
XP_011 HQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIP
          230       240       250       260       270       280    

      300         
pF1KB5 HVTRRTPDYFL
          : :  :::
XP_011 --PRTTTPYFL
            290   

>>NP_001116827 (OMIM: 612725) serine/threonine-protein p  (342 aa)
 initn: 1225 init1: 1185 opt: 1186  Z-score: 1507.9  bits: 287.3 E(85289): 3e-77
Smith-Waterman score: 1186; 60.1% identity (80.8% similar) in 281 aa overlap (31-309:64-342)

               10        20        30        40        50        60
pF1KB5 MDEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHG
                                     ::. . ..: .::::: :  :::::::.::
NP_001 PSGCGAPAGRPFLSPGPPPVFHFLRFLKERLCDYVCDLLLEESNVQPVSTPVTVCGDIHG
            40        50        60        70        80        90   

               70        80        90       100       110       120
pF1KB5 QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES
       ::.:: :::: ::. :::::.::::.:::::::.:: : :.:::... .:::.:::::::
NP_001 QFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHES
           100       110       120       130       140       150   

              130       140       150       160       170       180
pF1KB5 RQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHI
       :::::::::::::  ::::::.:.: : .::.: ..::.: ::.:.::::::.: :::.:
NP_001 RQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQI
           160       170       180       190       200       210   

              190       200       210       220       230       240
pF1KB5 RALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRA
       :...: ::.::.: .:::.::::.:   :.:::::::. ::  ... : : :.: :. ::
NP_001 RTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRA
           220       230       240       250       260       270   

              250       260       270       280         290        
pF1KB5 HQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDD--TLKYSFLQFDPAPRRGEP
       :::: :::..  :...::..::::::::::: :.:: . :  : . ....  :  .:  :
NP_001 HQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIP
           280       290       300       310       320       330   

      300         
pF1KB5 HVTRRTPDYFL
          : :  :::
NP_001 --PRTTTPYFL
             340  

>>XP_016878893 (OMIM: 602035) PREDICTED: serine/threonin  (228 aa)
 initn: 1118 init1: 1096 opt: 1117  Z-score: 1422.9  bits: 271.0 E(85289): 1.6e-72
Smith-Waterman score: 1117; 66.8% identity (86.5% similar) in 229 aa overlap (83-309:1-228)

             60        70        80        90       100       110  
pF1KB5 TVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERIT
                                     :::.::::.:::::  ::.:::::: .:::
XP_016                               MGDFVDRGFYSVETFLLLLALKVRYPDRIT
                                             10        20        30

            120       130       140       150       160       170  
pF1KB5 ILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSP
       ..::::::::::::::::::::::::...::.: :..:::: :.:..::.:::.::::::
XP_016 LIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSP
               40        50        60        70        80        90

            180       190       200       210       220       230  
pF1KB5 SIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHAN
       ::.:::.::..:: :::::.:::::::::::.:  :::.::::::: ::.:.   :: ::
XP_016 SIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAAN
              100       110       120       130       140       150

            240       250       260       270       280       290  
pF1KB5 GLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA
        . .. ::::::::::.:  ...:.:..::::::::::: :::.:::. :. .:. :. :
XP_016 DIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAA
              160       170       180       190       200       210

              300         
pF1KB5 PR--RGEPHVTRRTPDYFL
       :.  :: :   . . ::::
XP_016 PQETRGIPS-KKPVADYFL
               220        

>>XP_016878892 (OMIM: 602035) PREDICTED: serine/threonin  (228 aa)
 initn: 1118 init1: 1096 opt: 1117  Z-score: 1422.9  bits: 271.0 E(85289): 1.6e-72
Smith-Waterman score: 1117; 66.8% identity (86.5% similar) in 229 aa overlap (83-309:1-228)

             60        70        80        90       100       110  
pF1KB5 TVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERIT
                                     :::.::::.:::::  ::.:::::: .:::
XP_016                               MGDFVDRGFYSVETFLLLLALKVRYPDRIT
                                             10        20        30

            120       130       140       150       160       170  
pF1KB5 ILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSP
       ..::::::::::::::::::::::::...::.: :..:::: :.:..::.:::.::::::
XP_016 LIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSP
               40        50        60        70        80        90

            180       190       200       210       220       230  
pF1KB5 SIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHAN
       ::.:::.::..:: :::::.:::::::::::.:  :::.::::::: ::.:.   :: ::
XP_016 SIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAAN
              100       110       120       130       140       150

            240       250       260       270       280       290  
pF1KB5 GLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA
        . .. ::::::::::.:  ...:.:..::::::::::: :::.:::. :. .:. :. :
XP_016 DIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAA
              160       170       180       190       200       210

              300         
pF1KB5 PR--RGEPHVTRRTPDYFL
       :.  :: :   . . ::::
XP_016 PQETRGIPS-KKPVADYFL
               220        

>>NP_001290435 (OMIM: 602035) serine/threonine-protein p  (228 aa)
 initn: 1118 init1: 1096 opt: 1117  Z-score: 1422.9  bits: 271.0 E(85289): 1.6e-72
Smith-Waterman score: 1117; 66.8% identity (86.5% similar) in 229 aa overlap (83-309:1-228)

             60        70        80        90       100       110  
pF1KB5 TVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERIT
                                     :::.::::.:::::  ::.:::::: .:::
NP_001                               MGDFVDRGFYSVETFLLLLALKVRYPDRIT
                                             10        20        30

            120       130       140       150       160       170  
pF1KB5 ILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSP
       ..::::::::::::::::::::::::...::.: :..:::: :.:..::.:::.::::::
NP_001 LIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSP
               40        50        60        70        80        90

            180       190       200       210       220       230  
pF1KB5 SIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHAN
       ::.:::.::..:: :::::.:::::::::::.:  :::.::::::: ::.:.   :: ::
NP_001 SIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAAN
              100       110       120       130       140       150

            240       250       260       270       280       290  
pF1KB5 GLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPA
        . .. ::::::::::.:  ...:.:..::::::::::: :::.:::. :. .:. :. :
NP_001 DIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAA
              160       170       180       190       200       210

              300         
pF1KB5 PR--RGEPHVTRRTPDYFL
       :.  :: :   . . ::::
NP_001 PQETRGIPS-KKPVADYFL
               220        




309 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 16:32:21 2016 done: Thu Nov  3 16:32:23 2016
 Total Scan time:  6.740 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com