Result of FASTA (ccds) for pF1KA0583
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0583, 1919 aa
  1>>>pF1KA0583 1919 - 1919 aa - 1919 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 13.7939+/-0.00127; mu= -15.2139+/- 0.076
 mean_var=442.9989+/-90.428, 0's: 0 Z-trim(112.1): 58  B-trim: 11 in 1/54
 Lambda= 0.060936
 statistics sampled from 12840 (12887) to 12840 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.396), width:  16
 Scan time:  5.700

The best scores are:                                      opt bits E(32554)
CCDS7353.2 DLG5 gene_id:9231|Hs108|chr10           (1919) 12665 1129.6       0


>>CCDS7353.2 DLG5 gene_id:9231|Hs108|chr10                (1919 aa)
 initn: 12665 init1: 12665 opt: 12665  Z-score: 6032.2  bits: 1129.6 E(32554):    0
Smith-Waterman score: 12665; 99.9% identity (100.0% similar) in 1919 aa overlap (1-1919:1-1919)

               10        20        30        40        50        60
pF1KA0 MEPQRRELLAQCQQSLAQAMTEVEAVLGLLEAAGALSPGERRQLDEEAGGAKAELLLKLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MEPQRRELLAQCQQSLAQAMTEVEAVLGLLEAAGALSPGERRQLDEEAGGAKAELLLKLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 LAKERDHFQDLRAALEKTQPHLLPILYLNGVVGPPQPAEGAGSTYSVLSTMPSDSESSSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LAKERDHFQDLRAALEKTQPHLLPILYLNGVVGPPQPAEGAGSTYSVLSTMPSDSESSSS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 LSSVGTTGKAPSPPPLLTDRQVNEKVENLSIQLRLMTRERNELRKRLAFATHGTAFDKRP
       :::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
CCDS73 LSSVGTTGKAPSPPPLLTDQQVNEKVENLSIQLRLMTRERNELRKRLAFATHGTAFDKRP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 YHRLNPDYERLKIQCVRAMSDLQSLQNQHTNALKRCEEVAKETDFYHTLHSRLLSDQTRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YHRLNPDYERLKIQCVRAMSDLQSLQNQHTNALKRCEEVAKETDFYHTLHSRLLSDQTRL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 KDDVDMLRRENGQLLRERNLLQQSWEDMKRLHEEDQKEIGDLRAQQQQVLKHNGSSEILN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KDDVDMLRRENGQLLRERNLLQQSWEDMKRLHEEDQKEIGDLRAQQQQVLKHNGSSEILN
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 KLYDTAMDKLEVVKKDYDALRKRYSEKVAIHNADLSRLEQLGEENQRLLKQTEMLTQQRD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KLYDTAMDKLEVVKKDYDALRKRYSEKVAIHNADLSRLEQLGEENQRLLKQTEMLTQQRD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 TAIQLQHQCALSLRRFEAIHHELNKATAQNKDLQWEMELLQSELTELRTTQVKTAKESEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TAIQLQHQCALSLRRFEAIHHELNKATAQNKDLQWEMELLQSELTELRTTQVKTAKESEK
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 YREERDAVYSEYKLIMSERDQVISELDKLQTEVELAESKLKSSTSEKKAANEEMEALRQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YREERDAVYSEYKLIMSERDQVISELDKLQTEVELAESKLKSSTSEKKAANEEMEALRQI
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 KDTVTMDAGRANKEVEILRKQCKALCQELKEALQEADVAKCRRDWAFQERDKIVAERDSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KDTVTMDAGRANKEVEILRKQCKALCQELKEALQEADVAKCRRDWAFQERDKIVAERDSI
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 RTLCDNLRRERDRAVSELAEALRSLDDTRKQKNDVSRELKELKEQMESQLEKEARFRQLM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RTLCDNLRRERDRAVSELAEALRSLDDTRKQKNDVSRELKELKEQMESQLEKEARFRQLM
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 AHSSHDSAIDTDSMEWETEVVEFERETEDIDLKALGFDMAEGVNEPCFPGDCGIFVTKVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AHSSHDSAIDTDSMEWETEVVEFERETEDIDLKALGFDMAEGVNEPCFPGDCGIFVTKVD
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 KGSIADGRLRVNDWLLRINDVDLINKDKKQAIKALLNGEGAINMVVRRRKSLGGKVVTPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KGSIADGRLRVNDWLLRINDVDLINKDKKQAIKALLNGEGAINMVVRRRKSLGGKVVTPL
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 HINLSGQKDSGISLENGVYAAAVLPGSPAAKEGSLAVGDRIVAINGIALDNKSLNECESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HINLSGQKDSGISLENGVYAAAVLPGSPAAKEGSLAVGDRIVAINGIALDNKSLNECESL
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 LRSCQDSLTLSLLKVFPQSSSWSGQNIFENIKDSDKMLSFRAHGPEVQAHNKRNLIQHNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LRSCQDSLTLSLLKVFPQSSSWSGQNIFENIKDSDKMLSFRAHGPEVQAHNKRNLIQHNN
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 STQTDIFYTDRLEDRKEPGPPGGSSSFLHKPFPGGPLQVCPQACPSASERSLSSFRSDAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 STQTDIFYTDRLEDRKEPGPPGGSSSFLHKPFPGGPLQVCPQACPSASERSLSSFRSDAS
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA0 GDRGFGLVDVRGRRPLLPFETEVGPCGVGEASLDKADSEGSNSGGTWPKAMLSSTAVPEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GDRGFGLVDVRGRRPLLPFETEVGPCGVGEASLDKADSEGSNSGGTWPKAMLSSTAVPEK
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA0 LSVYKKPKQRKSIFDPNTFKRPQTPPKIDYLLPGPGPAHSPQPSKRAGPLTPPKPPRRSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LSVYKKPKQRKSIFDPNTFKRPQTPPKIDYLLPGPGPAHSPQPSKRAGPLTPPKPPRRSD
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA0 SIKFQHRLETSSESEATLVGSSPSTSPPSALPPDVDPGEPMHASPPRKARVRIASSYYPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SIKFQHRLETSSESEATLVGSSPSTSPPSALPPDVDPGEPMHASPPRKARVRIASSYYPE
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA0 GDGDSSHLPAKKSCDEDLTSQKVDELGQKRRRPKSAPSFRPKLAPVVIPAQFLEEQKCVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GDGDSSHLPAKKSCDEDLTSQKVDELGQKRRRPKSAPSFRPKLAPVVIPAQFLEEQKCVP
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KA0 ASGELSPELQEWAPYSPGHSSRHSNPPLYPSRPSVGTVPRSLTPSTTVSSILRNPIYTVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ASGELSPELQEWAPYSPGHSSRHSNPPLYPSRPSVGTVPRSLTPSTTVSSILRNPIYTVR
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KA0 SHRVGPCSSPPAARDAGPQGLHPSVQHQGRLSLDLSHRTCSDYSEMRATHGSNSLPSSAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SHRVGPCSSPPAARDAGPQGLHPSVQHQGRLSLDLSHRTCSDYSEMRATHGSNSLPSSAR
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KA0 LGSSSNLQFKAERIKIPSTPRYPRSVVGSERGSVSHSECSTPPQSPLNIDTLSSCSQSQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LGSSSNLQFKAERIKIPSTPRYPRSVVGSERGSVSHSECSTPPQSPLNIDTLSSCSQSQT
             1270      1280      1290      1300      1310      1320

             1330      1340      1350      1360      1370      1380
pF1KA0 SASTLPRIAVNPASLGERRKDRPYVEEPRHVKVQKGSEPLGISIVSGEKGGIYVSKVTVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SASTLPRIAVNPASLGERRKDRPYVEEPRHVKVQKGSEPLGISIVSGEKGGIYVSKVTVG
             1330      1340      1350      1360      1370      1380

             1390      1400      1410      1420      1430      1440
pF1KA0 SIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNPHVHQLSSHSRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNPHVHQLSSHSRS
             1390      1400      1410      1420      1430      1440

             1450      1460      1470      1480      1490      1500
pF1KA0 SSHLDPAGTHSTLQGSGTTTPEHPSVIDPLMEQDEGPSTPPAKQSSSRIAGDANKKTLEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SSHLDPAGTHSTLQGSGTTTPEHPSVIDPLMEQDEGPSTPPAKQSSSRIAGDANKKTLEP
             1450      1460      1470      1480      1490      1500

             1510      1520      1530      1540      1550      1560
pF1KA0 RVVFIKKSQLELGVHLCGGNLHGVFVAEVEDDSPAKGPDGLVPGDLILEYGSLDVRNKTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RVVFIKKSQLELGVHLCGGNLHGVFVAEVEDDSPAKGPDGLVPGDLILEYGSLDVRNKTV
             1510      1520      1530      1540      1550      1560

             1570      1580      1590      1600      1610      1620
pF1KA0 EEVYVEMLKPRDGVRLKVQYRPEEFTKAKGLPGDSFYIRALYDRLADVEQELSFKKDDIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EEVYVEMLKPRDGVRLKVQYRPEEFTKAKGLPGDSFYIRALYDRLADVEQELSFKKDDIL
             1570      1580      1590      1600      1610      1620

             1630      1640      1650      1660      1670      1680
pF1KA0 YVDDTLPQGTFGSWMAWQLDENAQKIQRGQIPSKYVMDQEFSRRLSMSEVKDDNSATKTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YVDDTLPQGTFGSWMAWQLDENAQKIQRGQIPSKYVMDQEFSRRLSMSEVKDDNSATKTL
             1630      1640      1650      1660      1670      1680

             1690      1700      1710      1720      1730      1740
pF1KA0 SAAARRSFFRRKHKHKRSGSKDGKDLLALDAFSSDSIPLFEDSVSLAYQRVQKVDCTALR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SAAARRSFFRRKHKHKRSGSKDGKDLLALDAFSSDSIPLFEDSVSLAYQRVQKVDCTALR
             1690      1700      1710      1720      1730      1740

             1750      1760      1770      1780      1790      1800
pF1KA0 PVLILGPLLDVVKEMLVNEAPGKFCRCPLEVMKASQQAIERGVKDCLFVDYKRRSGHFDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PVLILGPLLDVVKEMLVNEAPGKFCRCPLEVMKASQQAIERGVKDCLFVDYKRRSGHFDV
             1750      1760      1770      1780      1790      1800

             1810      1820      1830      1840      1850      1860
pF1KA0 TTVASIKEITEKNRHCLLDIAPHAIERLHHMHIYPIVIFIHYKSAKHIKEQRDPIYLRDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TTVASIKEITEKNRHCLLDIAPHAIERLHHMHIYPIVIFIHYKSAKHIKEQRDPIYLRDK
             1810      1820      1830      1840      1850      1860

             1870      1880      1890      1900      1910         
pF1KA0 VTQRHSKEQFEAAQKLEQEYSRYFTGVIQGGALSSICTQILAMVNQEQNKVLWIPACPL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VTQRHSKEQFEAAQKLEQEYSRYFTGVIQGGALSSICTQILAMVNQEQNKVLWIPACPL
             1870      1880      1890      1900      1910         




1919 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 09:47:38 2016 done: Thu Nov  3 09:47:39 2016
 Total Scan time:  5.700 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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