Result of FASTA (ccds) for pF1KA0333
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0333, 1189 aa
  1>>>pF1KA0333 1189 - 1189 aa - 1189 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.7879+/-0.00101; mu= 3.8437+/- 0.060
 mean_var=285.6393+/-56.809, 0's: 0 Z-trim(113.7): 35  B-trim: 5 in 1/51
 Lambda= 0.075887
 statistics sampled from 14248 (14270) to 14248 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.745), E-opt: 0.2 (0.438), width:  16
 Scan time:  6.260

The best scores are:                                      opt bits E(32554)
CCDS13508.2 DIDO1 gene_id:11083|Hs108|chr20        (1189) 7977 887.8       0
CCDS33506.1 DIDO1 gene_id:11083|Hs108|chr20        (2240) 7917 881.4       0
CCDS13509.1 DIDO1 gene_id:11083|Hs108|chr20        ( 562) 3608 409.2 1.5e-113
CCDS4966.1 PHF3 gene_id:23469|Hs108|chr6           (2039)  644 85.2 1.8e-15


>>CCDS13508.2 DIDO1 gene_id:11083|Hs108|chr20             (1189 aa)
 initn: 7977 init1: 7977 opt: 7977  Z-score: 4733.0  bits: 887.8 E(32554):    0
Smith-Waterman score: 7977; 100.0% identity (100.0% similar) in 1189 aa overlap (1-1189:1-1189)

               10        20        30        40        50        60
pF1KA0 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKSTKEDRRSEEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKSTKEDRRSEEK
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 AAAMAASKKTAPPGSAVGKQPAPRNLVPKKSSFANVAAATPAIKKPPSGFKGTIPKRPWL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AAAMAASKKTAPPGSAVGKQPAPRNLVPKKSSFANVAAATPAIKKPPSGFKGTIPKRPWL
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 SATPSSGASAARQAGPAPAAATAASKKFPGSAALVGAVRKPVVPSVPMASPAPGRLGAMS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SATPSSGASAARQAGPAPAAATAASKKFPGSAALVGAVRKPVVPSVPMASPAPGRLGAMS
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 AAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVTDNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVTDNR
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 YKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVME
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVME
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 SRTKLHNESKKTAPRQEAIPDLEDSPPVSDSEEQQESARAVPEKSTAPLLDVFSSMLKDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SRTKLHNESKKTAPRQEAIPDLEDSPPVSDSEEQQESARAVPEKSTAPLLDVFSSMLKDT
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 TSQHRAHLFDLNCKICTGQVPSAEDEPAPKKQKLSASVKKEDLKSKHDSSAPDPAPDSAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TSQHRAHLFDLNCKICTGQVPSAEDEPAPKKQKLSASVKKEDLKSKHDSSAPDPAPDSAD
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA0 EVMPEAVPEVASEPGLESASHPNVDRTYFPGPPGDGHPEPSPLEDLSPCPASCGSGVVTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EVMPEAVPEVASEPGLESASHPNVDRTYFPGPPGDGHPEPSPLEDLSPCPASCGSGVVTT
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA0 VTVSGRDPRTAPSSSCTAVASAASRPDSTHMVEARQDVPKPVLTSVMVPKSILAKPSSSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VTVSGRDPRTAPSSSCTAVASAASRPDSTHMVEARQDVPKPVLTSVMVPKSILAKPSSSP
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA0 DPRYLSVPPSPNISTSESRSPPEGDTTLFLSRLSTIWKGFINMQSVAKFVTKAYPVSGCF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DPRYLSVPPSPNISTSESRSPPEGDTTLFLSRLSTIWKGFINMQSVAKFVTKAYPVSGCF
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA0 DYLSEDLPDTIHIGGRIAPKTVWDYVGKLKSSVSKELCLIRFHPATEEEEVAYISLYSYF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DYLSEDLPDTIHIGGRIAPKTVWDYVGKLKSSVSKELCLIRFHPATEEEEVAYISLYSYF
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180         
pF1KA0 SSRGRFGVVANNNRHVKDLYLIPLSAQDPVPSKLLPFEGPGKRRLSGWR
       :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SSRGRFGVVANNNRHVKDLYLIPLSAQDPVPSKLLPFEGPGKRRLSGWR
             1150      1160      1170      1180         

>>CCDS33506.1 DIDO1 gene_id:11083|Hs108|chr20             (2240 aa)
 initn: 7917 init1: 7917 opt: 7917  Z-score: 4693.9  bits: 881.4 E(32554):    0
Smith-Waterman score: 7917; 100.0% identity (100.0% similar) in 1181 aa overlap (1-1181:1-1181)

               10        20        30        40        50        60
pF1KA0 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKSTKEDRRSEEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKSTKEDRRSEEK
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 AAAMAASKKTAPPGSAVGKQPAPRNLVPKKSSFANVAAATPAIKKPPSGFKGTIPKRPWL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 AAAMAASKKTAPPGSAVGKQPAPRNLVPKKSSFANVAAATPAIKKPPSGFKGTIPKRPWL
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 SATPSSGASAARQAGPAPAAATAASKKFPGSAALVGAVRKPVVPSVPMASPAPGRLGAMS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SATPSSGASAARQAGPAPAAATAASKKFPGSAALVGAVRKPVVPSVPMASPAPGRLGAMS
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 AAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVTDNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 AAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVTDNR
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 YKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVME
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 YKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVME
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 SRTKLHNESKKTAPRQEAIPDLEDSPPVSDSEEQQESARAVPEKSTAPLLDVFSSMLKDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SRTKLHNESKKTAPRQEAIPDLEDSPPVSDSEEQQESARAVPEKSTAPLLDVFSSMLKDT
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 TSQHRAHLFDLNCKICTGQVPSAEDEPAPKKQKLSASVKKEDLKSKHDSSAPDPAPDSAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TSQHRAHLFDLNCKICTGQVPSAEDEPAPKKQKLSASVKKEDLKSKHDSSAPDPAPDSAD
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA0 EVMPEAVPEVASEPGLESASHPNVDRTYFPGPPGDGHPEPSPLEDLSPCPASCGSGVVTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EVMPEAVPEVASEPGLESASHPNVDRTYFPGPPGDGHPEPSPLEDLSPCPASCGSGVVTT
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA0 VTVSGRDPRTAPSSSCTAVASAASRPDSTHMVEARQDVPKPVLTSVMVPKSILAKPSSSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VTVSGRDPRTAPSSSCTAVASAASRPDSTHMVEARQDVPKPVLTSVMVPKSILAKPSSSP
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA0 DPRYLSVPPSPNISTSESRSPPEGDTTLFLSRLSTIWKGFINMQSVAKFVTKAYPVSGCF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DPRYLSVPPSPNISTSESRSPPEGDTTLFLSRLSTIWKGFINMQSVAKFVTKAYPVSGCF
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA0 DYLSEDLPDTIHIGGRIAPKTVWDYVGKLKSSVSKELCLIRFHPATEEEEVAYISLYSYF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 DYLSEDLPDTIHIGGRIAPKTVWDYVGKLKSSVSKELCLIRFHPATEEEEVAYISLYSYF
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180                    
pF1KA0 SSRGRFGVVANNNRHVKDLYLIPLSAQDPVPSKLLPFEGPGKRRLSGWR           
       :::::::::::::::::::::::::::::::::::::::::                   
CCDS33 SSRGRFGVVANNNRHVKDLYLIPLSAQDPVPSKLLPFEGPGLESPRPNIILGLVICQKIK
             1150      1160      1170      1180      1190      1200

CCDS33 RPANSGELDKMDEKRTRLQPEEADVPAYPKVATVPQSEKKPSKYPLCSADAAVSTTPPGS
             1210      1220      1230      1240      1250      1260

>>CCDS13509.1 DIDO1 gene_id:11083|Hs108|chr20             (562 aa)
 initn: 3608 init1: 3608 opt: 3608  Z-score: 2152.3  bits: 409.2 E(32554): 1.5e-113
Smith-Waterman score: 3608; 100.0% identity (100.0% similar) in 529 aa overlap (1-529:1-529)

               10        20        30        40        50        60
pF1KA0 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKSTKEDRRSEEK
       :::::::::::::::::::::::::::::::::::::::::::::::::           
CCDS13 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 AAAMAASKKTAPPGSAVGKQPAPRNLVPKKSSFANVAAATPAIKKPPSGFKGTIPKRPWL
                                                                   
CCDS13 PSRSFWIAIPWACPGLGVAALC                                      
              550       560                                        

>>CCDS4966.1 PHF3 gene_id:23469|Hs108|chr6                (2039 aa)
 initn: 1390 init1: 636 opt: 644  Z-score: 391.1  bits: 85.2 E(32554): 1.8e-15
Smith-Waterman score: 1068; 37.4% identity (59.3% similar) in 599 aa overlap (594-1181:864-1333)

           570       580       590       600       610       620   
pF1KA0 RNLVPKKSSFANVAAATPAIKKPPSGFKGTIPKRPWLSATPSSGASAARQAGPAPAAATA
                                     .:.:    ..  .. .  ...  .  ..  
CCDS49 SGEGRNSSDCRDNEIKKWQLAPLRKMGQPVLPRR----SSEEKSEKIPKESTTVTCTGEK
           840       850       860           870       880         

           630       640       650       660        670       680  
pF1KA0 ASKKFPGSAALVGAVRKPVVPSVPMASPAPGRLGAMSAAPSQPNS-QIRQNIRRSLKEIL
       :::  ::.       .: :  .:  . ::        :. :.:.. ::::..:.:::.::
CCDS49 ASK--PGTHEKQEMKKKKVEKGVLNVHPA--------ASASKPSADQIRQSVRHSLKDIL
     890         900       910               920       930         

            690       700       710       720       730       740  
pF1KA0 WKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFH
        ::..::. : . :....:.: .::::.:..:. :: .::.::::.:::::::::. ::.
CCDS49 MKRLTDSN-LKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFK
     940        950       960       970       980       990        

            750       760       770       780       790            
pF1KA0 RVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKLHNESKK---TAPRQEAI
       .::. :..  .:.:..::::.::::..:..:  : ..:   : . : ..   :   ... 
CCDS49 KVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGE
     1000      1010      1020      1030      1040      1050        

     800       810            820         830       840       850  
pF1KA0 PDLEDSPPVSDSE---EQQESA--RAV--PEKSTAPLLDVFSSMLKDTTSQHRAHLFDLN
        ..:.. :....:   : :: :  ...  :: :     .: .:: :::::::: ::::::
CCDS49 IEIESDAPMKEQEAAMEIQEPAANKSLEKPEGSEKQKEEV-DSMSKDTTSQHRQHLFDLN
     1060      1070      1080      1090       1100      1110       

            860       870       880       890       900       910  
pF1KA0 CKICTGQVPSAEDEPAPKKQKLSASVKKEDLKSKHDSSAPDPAPDSADEVMPEAVPEVAS
       :::: :..    :. .::: :. ..: .     ::.        :.  : . .:.     
CCDS49 CKICIGRMAPPVDDLSPKKVKVVVGVAR-----KHS--------DNEAESIADAL-----
      1120      1130      1140                   1150              

            920       930       940       950       960       970  
pF1KA0 EPGLESASHPNVDRTYFPGPPGDGHPEPSPLEDLSPCPASCGSGVVTTVTVSGRDPRTAP
                                                                   
CCDS49 ------------------------------------------------------------
                                                                   

            980       990      1000      1010      1020      1030  
pF1KA0 SSSCTAVASAASRPDSTHMVEARQDVPKPVLTSVMVPKSILAKPSSSPDPRYLSVPPSPN
       ::. . .::         . : .:. :: ..               :: ::    :  :.
CCDS49 SSTSNILAS-------EFFEEEKQESPKSTF---------------SPAPR----PEMPG
    1160             1170      1180                         1190   

           1040      1050      1060      1070      1080      1090  
pF1KA0 ISTSESRSPPEGDTTLFLSRLSTIWKGFINMQSVAKFVTKAYPVSGCFDYLSEDLPDTIH
           ::          ::.::. :::::::: ::::::::::::::  .::.:::::.:.
CCDS49 TVEVEST---------FLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQ
          1200               1210      1220      1230      1240    

           1100      1110      1120      1130      1140      1150  
pF1KA0 IGGRIAPKTVWDYVGKLKSSVSKELCLIRFHPATEEEEVAYISLYSYFSSRGRFGVVANN
       .::::.:.:::::: :.:.: .::.:..:: :.:::....:  :..::::: :.::.:::
CCDS49 VGGRISPQTVWDYVEKIKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKRYGVAANN
         1250      1260      1270      1280      1290      1300    

           1160      1170      1180                                
pF1KA0 NRHVKDLYLIPLSAQDPVPSKLLPFEGPGKRRLSGWR                       
        ..:::.:::::.: : .:  :.::.:::                               
CCDS49 MKQVKDMYLIPLGATDKIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRQHSACASTSHI
         1310      1320      1330      1340      1350      1360    




1189 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 09:21:51 2016 done: Thu Nov  3 09:21:52 2016
 Total Scan time:  6.260 Total Display time:  0.210

Function used was FASTA [36.3.4 Apr, 2011]
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