Result of FASTA (ccds) for pF1KSDA1133
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA1133, 836 aa
  1>>>pF1KSDA1133 836 - 836 aa - 836 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.0319+/-0.000859; mu= 10.0631+/- 0.052
 mean_var=201.1327+/-39.745, 0's: 0 Z-trim(114.7): 59  B-trim: 72 in 1/53
 Lambda= 0.090434
 statistics sampled from 15172 (15231) to 15172 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.785), E-opt: 0.2 (0.468), width:  16
 Scan time:  5.150

The best scores are:                                      opt bits E(32554)
CCDS42999.1 ZNRF3 gene_id:84133|Hs108|chr22        ( 836) 5876 779.6       0
CCDS56225.1 ZNRF3 gene_id:84133|Hs108|chr22        ( 936) 5876 779.7       0
CCDS11607.1 RNF43 gene_id:54894|Hs108|chr17        ( 783)  662 99.3 2.7e-20
CCDS82172.1 RNF43 gene_id:54894|Hs108|chr17        ( 656)  507 79.0 2.9e-14


>>CCDS42999.1 ZNRF3 gene_id:84133|Hs108|chr22             (836 aa)
 initn: 5876 init1: 5876 opt: 5876  Z-score: 4154.0  bits: 779.6 E(32554):    0
Smith-Waterman score: 5876; 100.0% identity (100.0% similar) in 836 aa overlap (1-836:1-836)

               10        20        30        40        50        60
pF1KSD MHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD NPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHRPPRQPTEYFDMG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHRPPRQPTEYFDMG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD IFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 IFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD ALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD KGNPSAVCVETSNLSRGRQQRVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNPVTLLTMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KGNPSAVCVETSNLSRGRQQRVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNPVTLLTMD
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD RHGEQSLYSPQTPAYIRSYPPLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RHGEQSLYSPQTPAYIRSYPPLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD CFSQYETMYQHYYFQGLSYPEQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 CFSQYETMYQHYYFQGLSYPEQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSH
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD LESGSTSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LESGSTSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD GSCSTFRSSLSSDYDPFIYRSRSPCRASEAGGSGSSGRGPALCFEGSPPPEELPAVHSHG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GSCSTFRSSLSSDYDPFIYRSRSPCRASEAGGSGSSGRGPALCFEGSPPPEELPAVHSHG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KSD AGRGEPWPGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 AGRGEPWPGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRT
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KSD WKGGHELPSCACCCEPQPSPAGPSAGAAGSSTLFLGPHLYEGSGPAGGEPQSGSSQGLYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 WKGGHELPSCACCCEPQPSPAGPSAGAAGSSTLFLGPHLYEGSGPAGGEPQSGSSQGLYG
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KSD LHPDHLPRTDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LHPDHLPRTDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCYP
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KSD GARDLSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTRGPDTPRPHRGLGATREEERAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GARDLSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTRGPDTPRPHRGLGATREEERAL
              730       740       750       760       770       780

              790       800       810       820       830      
pF1KSD CCQARALLRPGCPPEEAGAVRANFPSALQDTQESSTTATEAAGPRSHSADSSSPGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 CCQARALLRPGCPPEEAGAVRANFPSALQDTQESSTTATEAAGPRSHSADSSSPGA
              790       800       810       820       830      

>>CCDS56225.1 ZNRF3 gene_id:84133|Hs108|chr22             (936 aa)
 initn: 5876 init1: 5876 opt: 5876  Z-score: 4153.3  bits: 779.7 E(32554):    0
Smith-Waterman score: 5876; 100.0% identity (100.0% similar) in 836 aa overlap (1-836:101-936)

                                             10        20        30
pF1KSD                               MHPLGLCNNNDEEDLYEYGWVGVVKLEQPE
                                     ::::::::::::::::::::::::::::::
CCDS56 SGDYTTYTTGLTGRFSRAGATLSAEGEIVQMHPLGLCNNNDEEDLYEYGWVGVVKLEQPE
               80        90       100       110       120       130

               40        50        60        70        80        90
pF1KSD LDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIK
              140       150       160       170       180       190

              100       110       120       130       140       150
pF1KSD LMNIVNKQKVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LMNIVNKQKVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQNS
              200       210       220       230       240       250

              160       170       180       190       200       210
pF1KSD MNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIP
              260       270       280       290       300       310

              220       230       240       250       260       270
pF1KSD CTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQRVTLPVHYPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 CTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQRVTLPVHYPG
              320       330       340       350       360       370

              280       290       300       310       320       330
pF1KSD RVHRTNAIPAYPTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYPPLHLDHSLAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RVHRTNAIPAYPTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYPPLHLDHSLAA
              380       390       400       410       420       430

              340       350       360       370       380       390
pF1KSD HRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQGLSYPEQEGQSPPSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 HRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQGLSYPEQEGQSPPSL
              440       450       460       470       480       490

              400       410       420       430       440       450
pF1KSD APRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCSGYLADCPGSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 APRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCSGYLADCPGSD
              500       510       520       530       540       550

              460       470       480       490       500       510
pF1KSD SSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYRSRSPCRASEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYRSRSPCRASEA
              560       570       580       590       600       610

              520       530       540       550       560       570
pF1KSD GGSGSSGRGPALCFEGSPPPEELPAVHSHGAGRGEPWPGPASPSGDQVSTCSLEMNYSSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GGSGSSGRGPALCFEGSPPPEELPAVHSHGAGRGEPWPGPASPSGDQVSTCSLEMNYSSN
              620       630       640       650       660       670

              580       590       600       610       620       630
pF1KSD SSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCACCCEPQPSPAGPSAGAAGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCACCCEPQPSPAGPSAGAAGS
              680       690       700       710       720       730

              640       650       660       670       680       690
pF1KSD STLFLGPHLYEGSGPAGGEPQSGSSQGLYGLHPDHLPRTDGVKYEGLPCCFYEEKQVARG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 STLFLGPHLYEGSGPAGGEPQSGSSQGLYGLHPDHLPRTDGVKYEGLPCCFYEEKQVARG
              740       750       760       770       780       790

              700       710       720       730       740       750
pF1KSD GGGGSGCYTEDYSVSVQYTLTEEPPPGCYPGARDLSQRIPIIPEDVDCDLGLPSDCQGTH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GGGGSGCYTEDYSVSVQYTLTEEPPPGCYPGARDLSQRIPIIPEDVDCDLGLPSDCQGTH
              800       810       820       830       840       850

              760       770       780       790       800       810
pF1KSD SLGSWGGTRGPDTPRPHRGLGATREEERALCCQARALLRPGCPPEEAGAVRANFPSALQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SLGSWGGTRGPDTPRPHRGLGATREEERALCCQARALLRPGCPPEEAGAVRANFPSALQD
              860       870       880       890       900       910

              820       830      
pF1KSD TQESSTTATEAAGPRSHSADSSSPGA
       ::::::::::::::::::::::::::
CCDS56 TQESSTTATEAAGPRSHSADSSSPGA
              920       930      

>>CCDS11607.1 RNF43 gene_id:54894|Hs108|chr17             (783 aa)
 initn: 845 init1: 266 opt: 662  Z-score: 477.9  bits: 99.3 E(32554): 2.7e-20
Smith-Waterman score: 919; 31.7% identity (52.9% similar) in 823 aa overlap (2-784:86-782)

                                            10        20        30 
pF1KSD                              MHPLGLCNNNDEEDLYEYGWVGVVKLEQPEL
                                     ::: ::: .:...: : :....::::.:. 
CCDS11 DPTGKLNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNL-EPGFISIVKLESPRR
          60        70        80        90        100       110    

              40        50        60        70        80        90 
pF1KSD DPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIKL
        :.:::.. .::. : .:::.::.::..:.  : .::.:     :  ::: . : :: ::
CCDS11 APRPCLSLASKARMAGERGASAVLFDITEDRAAAEQLQQ--PLGLTWPVVLIWGNDAEKL
          120       130       140       150         160       170  

             100        110       120       130       140          
pF1KSD MNIVNKQKVARARIQHR-PPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQ-N
       :..: :.. :..::. . ::  :   .:. :...   .. .. :  ...:. . :.:. .
CCDS11 MEFVYKNQKAHVRIELKEPPAWPD--YDVWILMTVVGTIFVIILASVLRIRCRPRHSRPD
            180       190         200       210       220       230

     150       160       170       180        190        200       
pF1KSD SMNRLAVQALEKMETRKFNSKSKGRREGSCGAL-DTLSSSSTSD-CAICLEKYIDGEELR
        ... .. :. .. ::..... .  :    :   :. :: :..  ::::::.. .:.:::
CCDS11 PLQQRTAWAISQLATRRYQASCRQAR----GEWPDSGSSCSSAPVCAICLEEFSEGQELR
              240       250           260       270       280      

       210       220       230       240       250       260       
pF1KSD VIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQRVTLPVH
       :: : :.:::.:::::: ::.::: :  :: :  .  ...    :    ::  :. :  .
CCDS11 VISCLHEFHRNCVDPWLHQHRTCPLCMFNITEGDSFSQSLGPSRSYQEPGR--RLHLIRQ
        290       300       310       320       330         340    

       270       280           290       300       310       320   
pF1KSD YPGRVHRTNAIPAY----PTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYPPLH
       .::..:    .::     :.:...     :               .:  :.   .. : :
CCDS11 HPGHAHYH--LPAAYLLGPSRSAVARPPRP---------------GPFLPSQEPGMGPRH
          350         360       370                      380       

           330       340       350       360       370         380 
pF1KSD LDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQG--LSYPE
              ::     ::  :  : .. .:.:                :: : ::  ::. .
CCDS11 -------HRFP---RAAHPRAPGEQQRLAGA---------------QHPYAQGWGLSHLQ
              390          400                      410       420  

             390       400       410       420       430       440 
pF1KSD QEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCSG
       . .: : .  :    :: ::..:::                 : .     :  .::   :
CCDS11 STSQHPAA-CPVPLRRARPPDSSGS-----------------GES-----YCTERS---G
            430        440                             450         

             450       460       470       480       490       500 
pF1KSD YLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYRS
       :::: :.:::::    : :: :::::::.::..: :::.:: ::: ::::::.::..: :
CCDS11 YLADGPASDSSS----GPCHGSSSDSVVNCTDISLQGVHGSSSTFCSSLSSDFDPLVYCS
        460           470       480       490       500       510  

               510            520       530       540         550  
pF1KSD RS--PCRASEAGGSGSSGRG-----PALCFEGSPPPEELPAVHSHGAGRGEPWPG--PAS
        .  : :..   .  :  :.     :.   . :   .     : :   : . : :  :. 
CCDS11 PKGDPQRVDMQPSVTSRPRSLDSVVPTGETQVSSHVHYHRHRHHHYKKRFQ-WHGRKPGP
            520       530       540       550       560        570 

            560       570       580       590       600       610  
pF1KSD PSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRTWKGGHELPSCAC
        .:   :   .     .. . :  .:......     : .:::. : .       :.:  
CCDS11 ETGVPQSRPPIP---RTQPQPEPPSPDQQVTR-----SNSAAPSGRLSN------PQCPR
             580          590       600            610             

             620       630                640       650       660  
pF1KSD CC-EPQPSPAGPSAGAAGSSTLF------LG---PHLYEGSGPAGGEPQSGSSQGLYGLH
          :: :.:.  :.   ..:.::      :.   :.  . .::.  ::  ::      .:
CCDS11 ALPEPAPGPVDASSICPSTSSLFNLQKSSLSARHPQRKRRGGPS--EPTPGSRPQDATVH
       620       630       640       650       660         670     

               670       680       690       700       710         
pF1KSD P--DHLPR-TDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCY
       :  . .:. : .: :   :    : . .  :  : .           .  : : : : ::
CCDS11 PACQIFPHYTPSVAYPWSP----EAHPLICGPPGLD-----------KRLLPETPGP-CY
         680       690           700                  710          

     720           730       740       750       760        770    
pF1KSD PGARD----LSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTRGPDTPRPH-RGLGA--
        ...     :. : :. :.        :..  :    .:   ..:   : :: . :.:  
CCDS11 SNSQPVWLCLTPRQPLEPHP-------PGE--GPSEWSS-DTAEGRPCPYPHCQVLSAQP
     720       730              740          750       760         

             780       790       800       810       820       830 
pF1KSD -TREEERALCCQARALLRPGCPPEEAGAVRANFPSALQDTQESSTTATEAAGPRSHSADS
        ..:: . :: ::                                               
CCDS11 GSEEELEELCEQAV                                              
     770       780                                                 

>>CCDS82172.1 RNF43 gene_id:54894|Hs108|chr17             (656 aa)
 initn: 709 init1: 266 opt: 507  Z-score: 369.6  bits: 79.0 E(32554): 2.9e-14
Smith-Waterman score: 764; 30.8% identity (51.2% similar) in 779 aa overlap (46-784:2-655)

          20        30        40        50        60        70     
pF1KSD YEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDP
                                     : .:::.::.::..:.  : .::.:     
CCDS82                              MAGERGASAVLFDITEDRAAAEQLQQ--PLG
                                            10        20           

          80        90       100        110       120       130    
pF1KSD LKRPVVYVKGADAIKLMNIVNKQKVARARIQHR-PPRQPTEYFDMGIFLAFFVVVSLVCL
       :  ::: . : :: :::..: :.. :..::. . ::  :   .:. :...   .. .. :
CCDS82 LTWPVVLIWGNDAEKLMEFVYKNQKAHVRIELKEPPAWPD--YDVWILMTVVGTIFVIIL
      30        40        50        60          70        80       

          140        150       160       170       180        190  
pF1KSD ILLVKIKLKQRRSQ-NSMNRLAVQALEKMETRKFNSKSKGRREGSCGAL-DTLSSSSTSD
         ...:. . :.:. . ... .. :. .. ::..... .  :    :   :. :: :.. 
CCDS82 ASVLRIRCRPRHSRPDPLQQRTAWAISQLATRRYQASCRQAR----GEWPDSGSSCSSAP
        90       100       110       120           130       140   

             200       210       220       230       240       250 
pF1KSD -CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVET
        ::::::.. .:.::::: : :.:::.:::::: ::.::: :  :: :  .  ...    
CCDS82 VCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNITEGDSFSQSLGPSR
           150       160       170       180       190       200   

             260       270       280           290       300       
pF1KSD SNLSRGRQQRVTLPVHYPGRVHRTNAIPAY----PTRTSMDSHGNPVTLLTMDRHGEQSL
       :    ::  :. :  ..::..:    .::     :.:...     :              
CCDS82 SYQEPGR--RLHLIRQHPGHAHYH--LPAAYLLGPSRSAVARPPRP--------------
           210         220         230       240                   

       310       320       330       340       350       360       
pF1KSD YSPQTPAYIRSYPPLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYET
        .:  :.   .. : :       ::     ::  :  : .. .:.:              
CCDS82 -GPFLPSQEPGMGPRH-------HRFP---RAAHPRAPGEQQRLAGA-------------
          250       260                 270       280              

       370         380       390       400       410       420     
pF1KSD MYQHYYFQG--LSYPEQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGS
         :: : ::  ::. .. .: : .  :    :: ::..:::                 : 
CCDS82 --QHPYAQGWGLSHLQSTSQHPAA-CPVPLRRARPPDSSGS-----------------GE
               290       300        310                        320 

         430       440       450       460       470       480     
pF1KSD TSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVYGSCST
       .     :  .::   ::::: :.:::    ::: :: :::::::.::..: :::.:: ::
CCDS82 S-----YCTERS---GYLADGPASDS----SSGPCHGSSSDSVVNCTDISLQGVHGSSST
                     330           340       350       360         

         490       500         510            520       530        
pF1KSD FRSSLSSDYDPFIYRSRS--PCRASEAGGSGSSGRG-----PALCFEGSPPPEELPAVHS
       : ::::::.::..: : .  : :..   .  :  :.     :.   . :   .     : 
CCDS82 FCSSLSSDFDPLVYCSPKGDPQRVDMQPSVTSRPRSLDSVVPTGETQVSSHVHYHRHRHH
     370       380       390       400       410       420         

      540         550       560       570       580       590      
pF1KSD HGAGRGEPWPG--PASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPD
       :   : . : :  :.  .:   :   .     .. . :  .:......     : .:::.
CCDS82 HYKKRFQ-WHGRKPGPETGVPQSRPPIP---RTQPQPEPPSPDQQVTR-----SNSAAPS
     430        440       450          460       470            480

        600       610        620       630                640      
pF1KSD LRRTWKGGHELPSCACCC-EPQPSPAGPSAGAAGSSTLF------LG---PHLYEGSGPA
        : .       :.:     :: :.:.  :.   ..:.::      :.   :.  . .::.
CCDS82 GRLSN------PQCPRALPEPAPGPVDASSICPSTSSLFNLQKSSLSARHPQRKRRGGPS
                    490       500       510       520       530    

        650       660          670       680       690       700   
pF1KSD GGEPQSGSSQGLYGLHP--DHLPR-TDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYS
         ::  ::      .::  . .:. : .: :   :    : . .  :  : .        
CCDS82 --EPTPGSRPQDATVHPACQIFPHYTPSVAYPWSP----EAHPLICGPPGLD--------
            540       550       560           570       580        

           710       720           730       740       750         
pF1KSD VSVQYTLTEEPPPGCYPGARD----LSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTR
          .  : : : : :: ...     :. : :. :.        :.  .:    .:   ..
CCDS82 ---KRLLPETPGP-CYSNSQPVWLCLTPRQPLEPHP-------PG--EGPSEWSS-DTAE
                 590        600       610                620       

     760        770          780       790       800       810     
pF1KSD GPDTPRPH-RGLGA---TREEERALCCQARALLRPGCPPEEAGAVRANFPSALQDTQESS
       :   : :: . :.:   ..:: . :: ::                               
CCDS82 GRPCPYPHCQVLSAQPGSEEELEELCEQAV                              
        630       640       650                                    




836 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 05:06:50 2016 done: Thu Nov  3 05:06:51 2016
 Total Scan time:  5.150 Total Display time:  0.100

Function used was FASTA [36.3.4 Apr, 2011]
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