GENSCAN 1.0	Date run:  3-Nov-116	Time: 03:45:49

Sequence gi568815595f:45603438_45843666 : 240229 bp : 43.56% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1335   1400   66  2  0   98   80    16 0.140   1.64
 1.02 Intr +  14067  14216  150  2  0   80  107    55 0.350   6.96
 1.03 Term +  22003  22068   66  0  0   68   54    64 0.107  -1.06
 1.04 PlyA +  22387  22392    6                               1.05

 2.06 PlyA -  25294  25289    6                               1.05
 2.05 Term -  28157  28066   92  0  2  123   47    56 0.063   2.88
 2.04 Intr -  39570  39512   59  2  2  101   35    63 0.566   0.83
 2.03 Intr -  41102  41051   52  0  1   80  115    43 0.710   4.17
 2.02 Intr -  44165  43913  253  2  1   20   95    93 0.308   0.21
 2.01 Init -  44540  44466   75  2  0   86   87    28 0.406   3.60
 2.00 Prom -  47384  47345   40                              -2.06

 3.00 Prom +  47679  47718   40                              -6.46
 3.01 Init +  50709  50721   13  2  1  119   75    -8 0.230   1.40
 3.02 Intr +  62213  62280   68  0  2   96  105    91 0.987  10.22
 3.03 Intr +  64857  64919   63  2  0  115  101    27 0.947   5.61
 3.04 Intr +  69253  69383  131  0  2   91   71   186 0.992  16.69
 3.05 Intr +  70017  70068   52  0  1  110   94    -8 0.991   0.91
 3.06 Intr +  70906  70974   69  0  0  109   59    96 0.600   8.18
 3.07 Term +  73485  73622  138  2  0  103   42   135 0.204   8.36
 3.08 PlyA +  77974  77979    6                               1.05

 4.00 Prom +  81816  81855   40                              -3.96
 4.01 Init +  86029  86060   32  0  2   84   68    86 0.035   5.42
 4.02 Intr + 100001 100098   98  2  2   61   68    94 0.543   4.35
 4.03 Intr + 101698 101772   75  2  0   81  110    28 0.667   3.79
 4.04 Intr + 103343 103470  128  0  2  105  110   -14 0.782   2.90
 4.05 Intr + 106061 106210  150  1  0   92   98    17 0.662   3.46
 4.06 Intr + 120038 120106   69  1  0  111   84   -10 0.175   0.28
 4.07 Intr + 127864 127943   80  0  2   54   67    44 0.217  -2.75
 4.08 Intr + 128616 128714   99  0  0   75  121    43 0.496   5.53
 4.09 Intr + 135141 135234   94  0  1   70  108    21 0.612   2.27
 4.10 Intr + 135344 135436   93  1  0  121   50     5 0.380   0.16
 4.11 Intr + 136150 136207   58  0  1  107  119   -27 0.612   0.76
 4.12 Term + 140096 140232  137  0  2   60   38    85 0.513  -1.12
 4.13 PlyA + 140925 140930    6                               1.05

 5.00 Prom + 142198 142237   40                              -4.96
 5.01 Init + 143560 143640   81  0  0  103   75    87 0.524   8.05
 5.02 Intr + 144271 144442  172  0  1   -4   77   151 0.658   4.32
 5.03 Intr + 144594 144743  150  1  0   83   70    70 0.875   4.83
 5.04 Intr + 148341 148390   50  1  2  110   96   -18 0.245  -0.40
 5.05 Intr + 150385 150521  137  0  2   98  103   -14 0.135   0.47
 5.06 Term + 150950 150992   43  2  1  130   49    41 0.172   1.03
 5.07 PlyA + 153161 153166    6                               1.05

 6.14 PlyA - 153328 153323    6                               1.05
 6.13 Term - 155690 155541  150  2  0  114   50   197 0.996  16.41
 6.12 Intr - 156400 156320   81  1  0   77   69    47 0.619   1.53
 6.11 Intr - 156585 156420  166  2  1   86   70   191 0.948  17.06
 6.10 Intr - 159635 159476  160  0  1   61   78   385 0.958  33.85
 6.09 Intr - 162304 162100  205  1  1   89   76   311 0.999  28.77
 6.08 Intr - 166934 166772  163  1  1   71  107   225 0.955  22.68
 6.07 Intr - 168021 167780  242  0  2   88   74   502 0.675  45.15
 6.06 Intr - 169178 169068  111  2  0  104  102   142 0.998  17.78
 6.05 Intr - 172551 172324  228  0  0  101   81   243 0.933  22.97
 6.04 Intr - 176663 176572   92  0  2  104   99   140 0.421  16.41
 6.03 Intr - 178786 178646  141  2  0   68   96   243 0.990  23.42
 6.02 Intr - 190155 190105   51  1  0  102   81    13 0.215   0.88
 6.01 Init - 192982 192862  121  1  1  106  105   247 0.998  28.55
 6.00 Prom - 193351 193312   40                              -7.06

 7.09 PlyA - 195247 195242    6                               1.05
 7.08 Term - 203939 203759  181  1  1   48   49   101 0.038  -0.72
 7.07 Intr - 224022 223919  104  0  2   26   72   121 0.504   3.27
 7.06 Intr - 225178 225002  177  1  0   63   77   104 0.974   6.92
 7.05 Intr - 229684 229613   72  1  0   93   85    32 0.887   3.00
 7.04 Intr - 230861 230801   61  1  1   88   88    54 0.999   4.14
 7.03 Intr - 232347 232153  195  2  0   79   47   260 0.983  19.53
 7.02 Intr - 234614 234490  125  2  2  125   69    42 0.839   5.38
 7.01 Init - 238554 238480   75  0  0  114   51    88 0.538   6.79

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:45603438_45843666|GENSCAN_predicted_peptide_1|93_aa
MDSHSVCLSRHAFSLESSLLGMAHDCMSSTVVPGVYLLHFSSSQQPCKVPANFLSCFEDA
KTKAESHKVTHLNTFLLTLVFECVQCLFGIYCV

>gi568815595f:45603438_45843666|GENSCAN_predicted_CDS_1|282_bp
atggattcccacagcgtctgcctgtcccgtcatgctttctctctggagtcctccctcctt
ggtatggctcatgactgcatgtcaagcacagttgtgccaggtgtctacctgctccatttc
tcctcctcccagcagccctgcaaagtgcccgccaattttctctcctgttttgaagatgcg
aaaactaaagcagagagccacaaggtcactcacctgaacaccttcctgctgactctggtt
tttgaatgtgttcagtgcttatttggcatctactgtgtgtga

>gi568815595f:45603438_45843666|GENSCAN_predicted_peptide_2|176_aa
MEMAMEDTEGRVIFTWVVMEAKGDKGIWDPAGIQMPPMVTIAGLLRMWRGSCHPAPEHRE
GPASSGQALDLPDPQADPCPAMHLVLENLATGSTLSQPQYSWEESGSSHGFSAPPWVEEG
YAVSGPRVCQQLPESVQCQWGGMAAWAESFGLLTSFLSTVTSDHLAQIQNKEATCV

>gi568815595f:45603438_45843666|GENSCAN_predicted_CDS_2|531_bp
atggagatggcaatggaagacactgaagggagagtgatattcacctgggtggtgatggag
gctaagggtgacaagggcatatgggaccctgctggcatccaaatgccaccaatggtgacc
attgcagggctgctgcggatgtggagaggcagctgtcaccctgcccctgaacacagggaa
gggcctgcatcctctggccaggcattggatttgccggacccccaggctgacccgtgccct
gctatgcatctggtccttgaaaacctggccacaggatccacactcagccagcctcagtac
tcctgggaagagtctgggagctcccatggatttagtgcgccgccatgggtggaggagggt
tatgcggtgtcaggcccacgggtgtgccaacagcttcctgagagtgtccagtgccagtgg
gggggcatggccgcctgggctgagtccttcgggctgctgacatcctttctctccaccgtg
accagtgaccacctagcacagatacaaaacaaggaagccacctgtgtttga

>gi568815595f:45603438_45843666|GENSCAN_predicted_peptide_3|177_aa
MDSTGRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDMILQALGKSYHPG
CFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPPEGSDETIRVVSM
DRDYHVECYHCEDCGLELNDEDGHRCYPLEDHLFCHSCHVKRLEKRPSSTALHQHHF

>gi568815595f:45603438_45843666|GENSCAN_predicted_CDS_3|534_bp
atggacagtacaggccggaagctgagaggaaaagccttttattttgtcaacggcaaagtg
ttttgtgaagaagacttcctgtactctggtttccagcagtcggctgacaggtgttttctt
tgtggacatctgatcatggacatgatcctgcaagccctggggaagtcctaccaccccggc
tgtttccgctgtgtcatctgtaatgagtgtttggatggggtgcccttcaccgtggactca
gagaacaagatctactgtgtccgagattaccacaaggtgctggcccccaagtgtgcagcc
tgtgggcttcccatccttccacctgagggctcagatgagaccatccgtgtcgtgtccatg
gacagagactaccacgtggagtgttaccactgcgaggactgtggtctggagctcaatgat
gaagatggccaccgctgttatccgctggaggaccacctgttctgtcactcctgccacgtg
aagaggctggagaagagaccctcatctacagcccttcaccagcaccacttctag

>gi568815595f:45603438_45843666|GENSCAN_predicted_peptide_4|370_aa
MATAAYEQLKLHITPEKFYVEACDDGADDVLTIDRVSTEVTLAVKKDVPPSAVTRPIFGI
LGTIHLVAGNYLIVITKKIKVGEFFSHVVWKATDFDVLSYKKTMLHLTDIQLQDNKTFLA
MLNHVLNVDGFYFSTTYDLTHTLQRLSNTSPEFQEMSLLERMDGFQRHFDSQVIIYGKQV
IINLINQKGSEKPLEQTFATMVSSLGSGMMRYIAFDFHKECKNMRWDRLSILLDQVAEMQ
DELRTGKRTHLGLIMDGWNSMIRYYKNNFSDGFRQDSIDLFLGNYSVDELESHSPLSVPR
DWKFLALPIIMVVAFSMCIICLLMAGDTWTETLAYVLFWGVASIGTFFIILYNGKDFVDA
PRLVQKEKID

>gi568815595f:45603438_45843666|GENSCAN_predicted_CDS_4|1113_bp
atggcgacggcggcctacgagcagctgaagctgcatatcacacctgaaaaattttatgtg
gaagcttgtgatgatggagcagatgacgtacttaccattgaccgtgtgtccacagaggtt
acccttgcagtcaagaaagatgttcctccttcagctgtcacaagaccaatatttggtata
ctgggcacaatccatctggtggcaggtaattatcttatagtcattaccaaaaagataaaa
gtaggtgaatttttcagtcatgtagtctggaaagcaacagattttgatgtcctttcttat
aagaagacaatgttgcacttaactgatattcagttacaagataataaaaccttcctagcg
atgctaaaccatgtcttgaatgtggatggattttacttttcaacaacatatgatttgacc
catactttgcagcggctatccaacactagtcctgaattccaagaaatgagtctcttggaa
aggatggacggtttccaaaggcattttgattcccaagtaattatttatggaaaacaagtt
ataatcaatctgattaaccagaagggctcggagaagccacttgagcagacatttgcaaca
atggtgtcttccttgggaagtggaatgatgagatacattgcctttgacttccataaggaa
tgtaaaaatatgagatgggatcgactaagtattttattggatcaggtagcagaaatgcaa
gatgaattaagaactggaaagagaactcatttgggacttataatggatggctggaactca
atgatacgatattataagaacaacttttccgatggatttagacaagattccatagactta
tttcttggaaactattcagtggatgaattagaatctcatagtcctttaagtgttccaagg
gactggaaattcctggctttgcctattatcatggttgttgccttttcaatgtgcattatc
tgtttgcttatggctggtgacacttggacagaaacactggcctatgtgctcttctgggga
gttgcaagcattggaacattttttatcattctttacaatggcaaagattttgtcgatgct
cccagactggtccagaaagaaaagatagactga

>gi568815595f:45603438_45843666|GENSCAN_predicted_peptide_5|210_aa
MGPARNLNPYPRLRGGMARAACTSMEQELNTYRNTLAAERRYSLQVSSELFYHSIKLLFI
LLILHLSTYFILPGHRTRTQDPPNVPSISKLLGTTVFRTGSRGSCLHACLVQLQPCREPA
PMPALGAAYPTAAAGPLYLWVLGLSILIYLPVTGYFHLIHRHLKLHMVKPLLIFTLQASS
VPHFPHLRKWHQHPPSRAFAVAVTSPGQAF

>gi568815595f:45603438_45843666|GENSCAN_predicted_CDS_5|633_bp
atgggcccagcaaggaacctgaacccctaccccagactgcgaggaggcatggccagagcc
gcctgcacgtccatggagcaggagctgaacacttatcggaacaccctggctgcggaaagg
aggtactccctgcaggtctcctctgagctgttctatcactcgataaagctcctcttcatc
ttgctcatcctccacttgtccacatacttcattcttcctggccacaggacaagaactcag
gacccgccaaatgttcctagcatctctaagcttctgggcactaccgtcttccgcactggc
agccgtggaagctgcttgcatgcatgcctggtccagctgcagccttgcagagagcccgca
cccatgccagcacttggagctgcctaccccactgcagcagctggtccgctctacttgtgg
gtgttggggctttctattctcatctatttgccggttactggatatttccacctaattcac
agacatctcaaacttcacatggtcaaaccactcttgatttttactctgcaggccagctct
gttccccactttcctcatctccggaaatggcaccagcatccccccagcagggcctttgca
gttgctgtcacctctcctggacaggccttctag

>gi568815595f:45603438_45843666|GENSCAN_predicted_peptide_6|636_aa
MEKARPLWANSLQFVFACISYAVGLGNVWRFPYLCQMYGGGQARPGMRNVNSEDYIPGSF
LVPYIIMLIVEGMPLLYLELAVGQRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYN
VINAWAFWYLFHSFQDPLPWSVCPLNGNHTGYDEECEKASSTQYFWYRKTLNISPSLQEN
GGVQWEPALCLLLAWLVVYLCILRGTESTGKVVYFTASLPYCVLIIYLIRGLTLHGATNG
LMYMFTPKIEQLANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSNNCQKHAIIVSLIN
SFTSIFASIVTFSIYGFKATFNYENCLKKVSLLLTNTFDLEDGFLTASNLEQVKGYLASA
YPSKYSEMFPQIKNCSLESELDTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLMLG
IGSMLGNTAAILTPLTDSKIISSHLPKEAISGLVCLVNCAIGMVFTMEAGNYWFDIFNDY
AATLSLLLIVLVETIAVCYVYGLRRFESDLKAMTGRAVSWYWKVMWAGVSPLLIVSLFVF
YLSDYILTGTLKYQAWDASQGWRWAPMATEKHGPFIFRNQGTISMVWGQLVTKDYPAYAL
AVIGLLVASSTMCIPLAALGTFVQRRLKRGDADPVA

>gi568815595f:45603438_45843666|GENSCAN_predicted_CDS_6|1911_bp
atggagaaagcgcggccgctgtgggccaactcgctacagttcgtgttcgcctgcatctcg
tacgccgtgggcctgggcaacgtgtggcgattcccgtacctgtgccagatgtacggcgga
ggccaggcccggcccggcatgaggaatgttaattctgaagattacattccaggtagtttc
ctggtcccctacatcatcatgcttatcgtggagggaatgccgctcttgtacctggaactg
gctgtggggcagcgcatgcggcagggcagcatcggcgcctggaggaccatcagcccgtac
ctcagtggtgtcggggtcgccagcgtggtggtctctttcttcctctccatgtactacaac
gtcatcaacgcctgggccttctggtacctcttccactccttccaggatcccctgccgtgg
tctgtctgcccactgaatggtaaccacacgggctacgatgaggagtgtgagaaggcgtcc
tccacacagtacttctggtacaggaaaaccctcaatatctcgccgtccctccaggagaac
gggggtgtgcagtgggagccggcgctgtgcctcctcctggcctggctggtggtgtacctg
tgcatcctgcgtggcaccgagtccactggcaaggtggtgtatttcacggcgtcactgccc
tattgcgtgctcatcatctacctcatcaggggcctcacgctccacggagccaccaatggc
ctcatgtacatgttcactcccaagatagagcagctggccaaccccaaggcctggatcaat
gcagccacccagatcttcttctcacttggcctgggcttcggcagcctgatcgccttcgcc
agctacaatgagccatccaacaactgccagaagcacgccatcatcgtgtccctcatcaac
agcttcacctccatatttgccagcattgtcaccttctccatctatggcttcaaggccacc
ttcaattatgaaaactgcttgaagaaggtgagtctgctgctgaccaacacttttgacctt
gaagatggctttttgacagccagcaacctggagcaggtgaagggctacctcgcatctgcc
tacccaagcaaatacagcgagatgttcccgcaaatcaaaaactgcagcttggaatcggag
ctagacacggccgtccagggcactggcctggcattcatcgtctacacagaggccattaaa
aacatggaggtgtcccagctgtggtcggtgctctacttcttcatgctgctgatgctgggc
attgggagcatgctggggaacacagcggccatcctcacccctctgacagacagcaagatc
atctccagccacctgcccaaggaggccatctcaggtctggtgtgccttgtcaactgtgcc
attggcatggtgttcacgatggaggctgggaactactggtttgacatattcaacgactac
gcggccacactgtccctgctgctcatcgtgctggtggagacgattgccgtgtgctacgtg
tacgggctgaggagatttgaaagtgaccttaaggccatgaccggccgagctgtgagctgg
tactggaaggtgatgtgggctggcgtaagcccactgctgattgtcagcctctttgtcttc
tacctgagcgactacatcctcacggggaccctgaagtatcaagcctgggacgcctcccag
ggctggcgctgggcccccatggccactgaaaagcatgggccattcattttccgaaaccag
gggactatttccatggtgtggggccagctcgtgaccaaagattacccggcctatgcactg
gctgtcatcgggctgcttgtggcctcctccaccatgtgcatccccctggcggccctgggg
acttttgttcagcgtcgcctcaagaggggagacgcagaccccgtggcctga

>gi568815595f:45603438_45843666|GENSCAN_predicted_peptide_7|329_aa
MVSNRPSGAAPRTGESAAGAGDTERAELGLNEHHQNEVINYMRFARSKRGLRLKTVDSCF
QDLKESRLVEDTFTIDEVSEVLNGLQAVVHSEVESELINTAYTNVLLLRQLFAQAEKWYL
KLQTDISELENRELLEQVAEFEKAEITSSNKKPILDVTKPKLAPLNEGGTAELLNKDFIK
AQDLSNLENTVAALKSEFQKTLNDKTENQKSLEENLATAKHDLLRVQEQLHMAEKELEKK
FQQTAAYRNMKEILTKKNDQIKDLRKRLAQSVARNRATATQSCSLQLPTQCQFCAAMLPS
ALASSSSDPGGSLRLVIFAKYSKLLGIAQ

>gi568815595f:45603438_45843666|GENSCAN_predicted_CDS_7|990_bp
atggtgagtaaccgaccctcaggcgccgcaccgcgcacaggagagagcgcggccggggct
ggagacactgagcgggcagagttgggcctaaatgagcaccatcaaaatgaagttattaat
tatatgcgttttgctcgttcaaagagaggcttgagactcaaaactgtagattcctgcttc
caagacctcaaggagagcaggctggtggaggacaccttcaccatagatgaagtctctgaa
gtcctcaatggattacaagctgtggttcatagtgaggtggaatctgagctcatcaacact
gcctataccaatgtgttacttctgcgacagctgtttgcacaagctgagaagtggtatctt
aagctacagacagacatctctgaacttgaaaaccgagaattattagaacaagttgcagaa
tttgaaaaagcagagattacatcttcaaacaaaaagcccatcttagatgtcacaaagcca
aaacttgctccacttaatgaaggtggaacagcagaactcctaaacaaggattttataaag
gcccaagacttaagtaacttagaaaacactgtcgctgccttaaagagtgagtttcagaag
acacttaatgacaagacagaaaaccagaagtcactggaggagaatctggcgacagccaag
cacgatctactcagggttcaggagcagctgcacatggctgaaaaggaattagaaaagaaa
tttcagcaaacagcagcttatcgaaacatgaaagagattcttaccaagaagaatgaccaa
atcaaagatctgaggaaaagactggcacaaagtgtagccagaaacagagccacagcaaca
cagagctgtagcctgcagctgccaacccagtgccagttctgtgcagccatgttgccttca
gctctggccagcagttcctccgatcctggaggctctctgcgtcttgttatatttgccaaa
tattctaaattgcttggaatagctcagtga