FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6784, 153 aa 1>>>pF1KB6784 153 - 153 aa - 153 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0720+/-0.000721; mu= 12.5849+/- 0.043 mean_var=58.3514+/-11.635, 0's: 0 Z-trim(108.1): 17 B-trim: 2 in 1/49 Lambda= 0.167899 statistics sampled from 9995 (10003) to 9995 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.307), width: 16 Scan time: 1.650 The best scores are: opt bits E(32554) CCDS4158.1 IL4 gene_id:3565|Hs108|chr5 ( 153) 1013 253.2 4.6e-68 CCDS4159.1 IL4 gene_id:3565|Hs108|chr5 ( 137) 625 159.2 8.2e-40 >>CCDS4158.1 IL4 gene_id:3565|Hs108|chr5 (153 aa) initn: 1013 init1: 1013 opt: 1013 Z-score: 1335.4 bits: 253.2 E(32554): 4.6e-68 Smith-Waterman score: 1013; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KB6 MGLTSQLLPPLFFLLACAGNFVHGHKCDITLQEIIKTLNSLTEQKTLCTELTVTDIFAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MGLTSQLLPPLFFLLACAGNFVHGHKCDITLQEIIKTLNSLTEQKTLCTELTVTDIFAAS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 KNTTEKETFCRAATVLRQFYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KNTTEKETFCRAATVLRQFYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAGL 70 80 90 100 110 120 130 140 150 pF1KB6 NSCPVKEANQSTLENFLERLKTIMREKYSKCSS ::::::::::::::::::::::::::::::::: CCDS41 NSCPVKEANQSTLENFLERLKTIMREKYSKCSS 130 140 150 >>CCDS4159.1 IL4 gene_id:3565|Hs108|chr5 (137 aa) initn: 625 init1: 625 opt: 625 Z-score: 828.2 bits: 159.2 E(32554): 8.2e-40 Smith-Waterman score: 875; 89.5% identity (89.5% similar) in 153 aa overlap (1-153:1-137) 10 20 30 40 50 60 pF1KB6 MGLTSQLLPPLFFLLACAGNFVHGHKCDITLQEIIKTLNSLTEQKTLCTELTVTDIFAAS ::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MGLTSQLLPPLFFLLACAGNFVHGHKCDITLQEIIKTLNSLTEQK--------------- 10 20 30 40 70 80 90 100 110 120 pF1KB6 KNTTEKETFCRAATVLRQFYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAGL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 -NTTEKETFCRAATVLRQFYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAGL 50 60 70 80 90 100 130 140 150 pF1KB6 NSCPVKEANQSTLENFLERLKTIMREKYSKCSS ::::::::::::::::::::::::::::::::: CCDS41 NSCPVKEANQSTLENFLERLKTIMREKYSKCSS 110 120 130 153 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:29:47 2016 done: Sat Nov 5 22:29:47 2016 Total Scan time: 1.650 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]