FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6778, 152 aa 1>>>pF1KB6778 152 - 152 aa - 152 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1586+/-0.000276; mu= 12.3341+/- 0.017 mean_var=59.7415+/-11.473, 0's: 0 Z-trim(118.2): 19 B-trim: 47 in 1/56 Lambda= 0.165934 statistics sampled from 30922 (30935) to 30922 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.363), width: 16 Scan time: 5.400 The best scores are: opt bits E(85289) NP_000579 (OMIM: 147740) interleukin-3 precursor [ ( 152) 998 246.5 1.2e-65 >>NP_000579 (OMIM: 147740) interleukin-3 precursor [Homo (152 aa) initn: 998 init1: 998 opt: 998 Z-score: 1299.6 bits: 246.5 E(85289): 1.2e-65 Smith-Waterman score: 998; 100.0% identity (100.0% similar) in 152 aa overlap (1-152:1-152) 10 20 30 40 50 60 pF1KB6 MSRLPVLLLLQLLVRPGLQAPMTQTTPLKTSWVNCSNMIDEIITHLKQPPLPLLDFNNLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MSRLPVLLLLQLLVRPGLQAPMTQTTPLKTSWVNCSNMIDEIITHLKQPPLPLLDFNNLN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 GEDQDILMENNLRRPNLEAFNRAVKSLQNASAIESILKNLLPCLPLATAAPTRHPIHIKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 GEDQDILMENNLRRPNLEAFNRAVKSLQNASAIESILKNLLPCLPLATAAPTRHPIHIKD 70 80 90 100 110 120 130 140 150 pF1KB6 GDWNEFRRKLTFYLKTLENAQAQQTTLSLAIF :::::::::::::::::::::::::::::::: NP_000 GDWNEFRRKLTFYLKTLENAQAQQTTLSLAIF 130 140 150 152 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:37:54 2016 done: Sun Nov 6 04:37:54 2016 Total Scan time: 5.400 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]