FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6778, 152 aa 1>>>pF1KB6778 152 - 152 aa - 152 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0426+/-0.000593; mu= 13.2113+/- 0.036 mean_var=59.0972+/-11.450, 0's: 0 Z-trim(111.1): 8 B-trim: 0 in 0/52 Lambda= 0.166836 statistics sampled from 12122 (12125) to 12122 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.76), E-opt: 0.2 (0.372), width: 16 Scan time: 1.890 The best scores are: opt bits E(32554) CCDS4149.1 IL3 gene_id:3562|Hs108|chr5 ( 152) 998 247.7 2.1e-66 >>CCDS4149.1 IL3 gene_id:3562|Hs108|chr5 (152 aa) initn: 998 init1: 998 opt: 998 Z-score: 1305.8 bits: 247.7 E(32554): 2.1e-66 Smith-Waterman score: 998; 100.0% identity (100.0% similar) in 152 aa overlap (1-152:1-152) 10 20 30 40 50 60 pF1KB6 MSRLPVLLLLQLLVRPGLQAPMTQTTPLKTSWVNCSNMIDEIITHLKQPPLPLLDFNNLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MSRLPVLLLLQLLVRPGLQAPMTQTTPLKTSWVNCSNMIDEIITHLKQPPLPLLDFNNLN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 GEDQDILMENNLRRPNLEAFNRAVKSLQNASAIESILKNLLPCLPLATAAPTRHPIHIKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 GEDQDILMENNLRRPNLEAFNRAVKSLQNASAIESILKNLLPCLPLATAAPTRHPIHIKD 70 80 90 100 110 120 130 140 150 pF1KB6 GDWNEFRRKLTFYLKTLENAQAQQTTLSLAIF :::::::::::::::::::::::::::::::: CCDS41 GDWNEFRRKLTFYLKTLENAQAQQTTLSLAIF 130 140 150 152 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:37:53 2016 done: Sun Nov 6 04:37:53 2016 Total Scan time: 1.890 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]