FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3410, 310 aa 1>>>pF1KE3410 310 - 310 aa - 310 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0907+/-0.000842; mu= 8.8085+/- 0.051 mean_var=127.3817+/-25.579, 0's: 0 Z-trim(111.1): 6 B-trim: 30 in 1/52 Lambda= 0.113637 statistics sampled from 12099 (12102) to 12099 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.372), width: 16 Scan time: 2.510 The best scores are: opt bits E(32554) CCDS43462.1 TAF8 gene_id:129685|Hs108|chr6 ( 310) 1995 337.8 6.6e-93 >>CCDS43462.1 TAF8 gene_id:129685|Hs108|chr6 (310 aa) initn: 1995 init1: 1995 opt: 1995 Z-score: 1781.5 bits: 337.8 E(32554): 6.6e-93 Smith-Waterman score: 1995; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310) 10 20 30 40 50 60 pF1KE3 MADAAATAGAGGSGTRSGSKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MADAAATAGAGGSGTRSGSKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVET 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNVDTLPAYAKRSQRMVIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNVDTLPAYAKRSQRMVIT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 APPVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 APPVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIPYLTALLPSELEMQQMEET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 SQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIPYLTALLPSELEMQQMEET 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 DSSEQDEQTDTENLALHISMEDSGAEKENTSVLQQNPSLSGSRNGEENIIDNPYLRPVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DSSEQDEQTDTENLALHISMEDSGAEKENTSVLQQNPSLSGSRNGEENIIDNPYLRPVKK 250 260 270 280 290 300 310 pF1KE3 PKIRRKKSLS :::::::::: CCDS43 PKIRRKKSLS 310 310 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:08:27 2016 done: Sun Nov 6 05:08:27 2016 Total Scan time: 2.510 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]