(Linear) (Six-base) MAPSORT of: KIEE3690.seq Check: 5259 from: 1 to: 3024 KIEE3690.orf With 182 enzymes: SgfI * March 22, 2012 16:39 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 337 2728 3024 Size: 337 2391 296 Fragments arranged by size: 2391 337 296 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1003 2228 2717 2831 3024 Size: 1003 1225 489 114 193 Fragments arranged by size: 1225 1003 489 193 114 AflII C'TTAA_G Cuts at: 0 2529 3024 Size: 2529 495 AflIII A'CryG_T Cuts at: 0 2325 3024 Size: 2325 699 AhdI GACnn_n'nnGTC Cuts at: 0 1785 3024 Size: 1785 1239 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 2393 3024 Size: 2393 631 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 2475 2507 3024 Size: 2475 32 517 Fragments arranged by size: 2475 517 32 AlwNI CAG_nnn'CTG Cuts at: 0 2305 3024 Size: 2305 719 ApaLI G'TGCA_C Cuts at: 0 2321 3024 Size: 2321 703 ApoI r'AATT_y Cuts at: 0 69 112 637 828 869 1509 1767 2138 Size: 69 43 525 191 41 640 258 371 Cuts at: 2138 2872 3024 Size: 734 152 Fragments arranged by size: 734 640 525 371 258 191 152 69 43 41 AseI AT'TA_AT Cuts at: 0 2501 2996 3013 3024 Size: 2501 495 17 11 Fragments arranged by size: 2501 495 17 11 AvaI C'yCGr_G Cuts at: 0 2771 3024 Size: 2771 253 BamHI G'GATC_C Cuts at: 0 21 2787 3024 Size: 21 2766 237 Fragments arranged by size: 2766 237 21 BanII G_rGCy'C Cuts at: 0 562 2257 3024 Size: 562 1695 767 Fragments arranged by size: 1695 767 562 BbsI GAAGACnn'nnnn_ Cuts at: 0 2168 3024 Size: 2168 856 BbvCI CC'TCA_GC Cuts at: 0 698 3024 Size: 698 2326 BclI T'GATC_A Cuts at: 0 1433 3024 Size: 1433 1591 BlpI GC'TnA_GC Cuts at: 0 1697 3024 Size: 1697 1327 Bme1580I G_kGCm'C Cuts at: 0 2325 3024 Size: 2325 699 BmrI ACTGGGnnnn_n' Cuts at: 0 1085 3024 Size: 1085 1939 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 116 2420 3024 Size: 116 2304 604 Fragments arranged by size: 2304 604 116 Bpu10I CC'TnA_GC Cuts at: 0 698 2256 3024 Size: 698 1558 768 Fragments arranged by size: 1558 768 698 BsaI GGTCTCn'nnnn_ Cuts at: 0 1410 1793 3024 Size: 1410 383 1231 Fragments arranged by size: 1410 1231 383 BsaAI yAC'GTr Cuts at: 0 1586 2452 3024 Size: 1586 866 572 Fragments arranged by size: 1586 866 572 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 1740 1770 3024 Size: 1740 30 1254 Fragments arranged by size: 1740 1254 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 1426 3024 Size: 1426 1598 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 503 1400 3024 Size: 503 897 1624 Fragments arranged by size: 1624 897 503 BsiHKAI G_wGCw'C Cuts at: 0 2257 2325 3024 Size: 2257 68 699 Fragments arranged by size: 2257 699 68 BsmI GAATG_Cn' Cuts at: 0 291 3024 Size: 291 2733 Bsp1286I G_dGCh'C Cuts at: 0 562 2257 2325 3024 Size: 562 1695 68 699 Fragments arranged by size: 1695 699 562 68 BspHI T'CATG_A Cuts at: 0 1602 3024 Size: 1602 1422 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 337 2728 3024 Size: 337 2391 296 Fragments arranged by size: 2391 337 296 BsrDI GCAATG_nn' Cuts at: 0 911 3024 Size: 911 2113 BsrFI r'CCGG_y Cuts at: 0 1548 3024 Size: 1548 1476 BsrGI T'GTAC_A Cuts at: 0 1254 1500 3024 Size: 1254 246 1524 Fragments arranged by size: 1524 1254 246 BstAPI GCAn_nnn'nTGC Cuts at: 0 418 2101 3024 Size: 418 1683 923 Fragments arranged by size: 1683 923 418 BstXI CCAn_nnnn'nTGG Cuts at: 0 788 2842 3024 Size: 788 2054 182 Fragments arranged by size: 2054 788 182 BstYI r'GATC_y Cuts at: 0 21 261 1285 2704 2787 3024 Size: 21 240 1024 1419 83 237 Fragments arranged by size: 1419 1024 240 237 83 21 Bsu36I CC'TnA_GG Cuts at: 0 2190 3024 Size: 2190 834 BtgI C'CryG_G Cuts at: 0 861 2648 3024 Size: 861 1787 376 Fragments arranged by size: 1787 861 376 BtsI GCAGTG_nn' Cuts at: 0 715 1197 1388 2177 3024 Size: 715 482 191 789 847 Fragments arranged by size: 847 789 715 482 191 DraI TTT'AAA Cuts at: 0 332 507 662 1775 1805 3024 Size: 332 175 155 1113 30 1219 Fragments arranged by size: 1219 1113 332 175 155 30 DraIII CAC_nnn'GTG Cuts at: 0 2320 3024 Size: 2320 704 EaeI y'GGCC_r Cuts at: 0 324 3024 Size: 324 2700 EarI CTCTTCn'nnn_ Cuts at: 0 561 956 1108 1796 2009 3024 Size: 561 395 152 688 213 1015 Fragments arranged by size: 1015 688 561 395 213 152 EcoICRI GAG'CTC Cuts at: 0 2255 3024 Size: 2255 769 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 116 1003 2228 2420 2717 2831 3024 Size: 116 887 1225 192 297 114 193 Fragments arranged by size: 1225 887 297 193 192 116 114 EcoO109I rG'GnC_Cy Cuts at: 0 514 3024 Size: 514 2510 EcoRI G'AATT_C Cuts at: 0 112 1767 3024 Size: 112 1655 1257 Fragments arranged by size: 1655 1257 112 EcoRV GAT'ATC Cuts at: 0 1104 3024 Size: 1104 1920 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 1732 1900 3024 Size: 1732 168 1124 Fragments arranged by size: 1732 1124 168 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 1425 1457 1711 1740 1743 1771 1772 1803 Size: 1425 32 254 29 3 28 1 31 Cuts at: 1803 2452 2484 3024 Size: 649 32 540 Fragments arranged by size: 1425 649 540 254 32 32 31 29 28 3 1 HincII GTy'rAC Cuts at: 0 1002 3024 Size: 1002 2022 HpaI GTT'AAC Cuts at: 0 1002 3024 Size: 1002 2022 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 115 183 2734 3024 Size: 115 68 2551 290 Fragments arranged by size: 2551 290 115 68 MscI TGG'CCA Cuts at: 0 326 3024 Size: 326 2698 MslI CAynn'nnrTG Cuts at: 0 1074 1317 1607 3024 Size: 1074 243 290 1417 Fragments arranged by size: 1417 1074 290 243 MspA1I CmG'CkG Cuts at: 0 697 3024 Size: 697 2327 NcoI C'CATG_G Cuts at: 0 861 2648 3024 Size: 861 1787 376 Fragments arranged by size: 1787 861 376 NdeI CA'TA_TG Cuts at: 0 440 3024 Size: 440 2584 NspI r_CATG'y Cuts at: 0 601 1131 1322 1678 2329 2380 3024 Size: 601 530 191 356 651 51 644 Fragments arranged by size: 651 644 601 530 356 191 51 PciI A'CATG_T Cuts at: 0 2325 3024 Size: 2325 699 PfoI T'CCnGG_A Cuts at: 0 4 1661 3024 Size: 4 1657 1363 Fragments arranged by size: 1657 1363 4 PmlI CAC'GTG Cuts at: 0 2452 3024 Size: 2452 572 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 2244 2276 3024 Size: 2244 32 748 Fragments arranged by size: 2244 748 32 PpuMI rG'GwC_Cy Cuts at: 0 514 3024 Size: 514 2510 PsrI GAACnnnnnnTACnnnnnnn_nnnnn' Cuts at: 0 1538 1570 3024 Size: 1538 32 1454 Fragments arranged by size: 1538 1454 32 PstI C_TGCA'G Cuts at: 0 606 2766 3024 Size: 606 2160 258 Fragments arranged by size: 2160 606 258 PvuII CAG'CTG Cuts at: 0 697 3024 Size: 697 2327 SacI G_AGCT'C Cuts at: 0 2257 3024 Size: 2257 767 SapI GCTCTTCn'nnn_ Cuts at: 0 561 3024 Size: 561 2463 ScaI AGT'ACT Cuts at: 0 37 3024 Size: 37 2987 SfcI C'TryA_G Cuts at: 0 582 602 2762 3024 Size: 582 20 2160 262 Fragments arranged by size: 2160 582 262 20 SmlI C'TyrA_G Cuts at: 0 2529 2771 3024 Size: 2529 242 253 Fragments arranged by size: 2529 253 242 SnaBI TAC'GTA Cuts at: 0 1586 3024 Size: 1586 1438 SpeI A'CTAG_T Cuts at: 0 148 3024 Size: 148 2876 SphI G_CATG'C Cuts at: 0 601 3024 Size: 601 2423 SspI AAT'ATT Cuts at: 0 1593 1914 3024 Size: 1593 321 1110 Fragments arranged by size: 1593 1110 321 StyI C'CwwG_G Cuts at: 0 861 2648 3024 Size: 861 1787 376 Fragments arranged by size: 1787 861 376 SwaI ATTT'AAAT Cuts at: 0 507 3024 Size: 507 2517 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 860 3024 Size: 860 2164 TatI w'GTAC_w Cuts at: 0 35 606 1178 1254 1500 1713 3024 Size: 35 571 572 76 246 213 1311 Fragments arranged by size: 1311 572 571 246 213 76 35 Tth111I GACn'n_nGTC Cuts at: 0 2843 3024 Size: 2843 181 XbaI T'CTAG_A Cuts at: 0 1072 3024 Size: 1072 1952 XhoI C'TCGA_G Cuts at: 0 2771 3024 Size: 2771 253 XmnI GAAnn'nnTTC Cuts at: 0 2675 3024 Size: 2675 349 Enzymes that do cut: AarI AcuI AflII AflIII AhdI AlfI AloI AlwNI ApaLI ApoI AseI AvaI BamHI BanII BbsI BbvCI BclI BlpI Bme1580I BmrI BpmI Bpu10I BsaI BsaAI BsaXI BseRI BsgI BsiHKAI BsmI Bsp1286I BspHI BspMI BsrDI BsrFI BsrGI BstAPI BstXI BstYI Bsu36I BtgI BtsI DraI DraIII EaeI EarI EcoICRI Eco57MI EcoO109I EcoRI EcoRV FalI Hin4I HincII HpaI MmeI MscI MslI MspA1I NcoI NdeI NspI PciI PfoI PmlI PpiI PpuMI PsrI PstI PvuII SacI SapI ScaI SfcI SmlI SnaBI SpeI SphI SspI StyI SwaI TaqII TatI Tth111I XbaI XhoI XmnI Enzymes that do not cut: AatII AccI Acc65I AclI AfeI AgeI AleI ApaI AscI AsiSI AvrII BaeI BanI BbeI BcgI BciVI BfrBI BglI BglII BmgBI BmtI BplI BpuEI BsaBI BsaHI BsaWI BseYI BsiEI BsiWI BsmBI BspEI BsrBI BssHII BssSI BstBI BstEII BstZ17I BtgZI ClaI CspCI DrdI EagI EciI EcoNI FseI FspI FspAI HaeII HindIII KasI KpnI MfeI MluI NaeI NarI NgoMIV NheI NotI NruI NsiI PacI PasI PflMI PmeI PshAI PsiI PspOMI PspXI PvuI RsrII SacII SalI SanDI SbfI SexAI SfiI SfoI SgfI SgrAI SmaI SrfI StuI TstI XcmI XmaI ZraI