FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5640, 565 aa 1>>>pF1KE5640 565 - 565 aa - 565 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8202+/-0.000463; mu= 12.2777+/- 0.029 mean_var=134.7300+/-28.448, 0's: 0 Z-trim(114.0): 148 B-trim: 371 in 1/53 Lambda= 0.110495 statistics sampled from 23516 (23686) to 23516 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.278), width: 16 Scan time: 8.990 The best scores are: opt bits E(85289) NP_006581 (OMIM: 611594) U4/U6.U5 tri-snRNP-associ ( 565) 3760 611.5 2.3e-174 NP_001243654 (OMIM: 611594) U4/U6.U5 tri-snRNP-ass ( 565) 3760 611.5 2.3e-174 NP_001243656 (OMIM: 611594) U4/U6.U5 tri-snRNP-ass ( 487) 3193 521.1 3.3e-147 NP_001243655 (OMIM: 611594) U4/U6.U5 tri-snRNP-ass ( 488) 3164 516.4 8.1e-146 NP_001243657 (OMIM: 611594) U4/U6.U5 tri-snRNP-ass ( 462) 2805 459.2 1.3e-128 XP_011530790 (OMIM: 611594) PREDICTED: U4/U6.U5 tr ( 296) 1975 326.7 6.3e-89 XP_016858671 (OMIM: 611594) PREDICTED: U4/U6.U5 tr ( 296) 1975 326.7 6.3e-89 XP_006711986 (OMIM: 611594) PREDICTED: U4/U6.U5 tr ( 296) 1975 326.7 6.3e-89 XP_006711985 (OMIM: 611594) PREDICTED: U4/U6.U5 tr ( 296) 1975 326.7 6.3e-89 XP_011530789 (OMIM: 611594) PREDICTED: U4/U6.U5 tr ( 296) 1975 326.7 6.3e-89 XP_016878210 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 334 65.5 8.3e-10 XP_016878211 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 334 65.5 8.3e-10 NP_001269978 (OMIM: 603158) ubiquitin carboxyl-ter (1012) 334 65.6 8.9e-10 XP_016878207 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 334 65.6 9.4e-10 XP_016878209 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 334 65.6 9.4e-10 XP_006720825 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 334 65.6 9.4e-10 XP_016878208 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 334 65.6 9.4e-10 NP_001122082 (OMIM: 603158) ubiquitin carboxyl-ter (1118) 334 65.6 9.6e-10 XP_006720824 (OMIM: 603158) PREDICTED: ubiquitin c (1118) 334 65.6 9.6e-10 NP_005145 (OMIM: 603158) ubiquitin carboxyl-termin (1118) 334 65.6 9.6e-10 XP_011520495 (OMIM: 603158) PREDICTED: ubiquitin c (1118) 334 65.6 9.6e-10 XP_005271779 (OMIM: 604725) PREDICTED: ubiquitin c ( 605) 310 61.6 8.6e-09 XP_005271778 (OMIM: 604725) PREDICTED: ubiquitin c ( 605) 310 61.6 8.6e-09 NP_004196 (OMIM: 604725) ubiquitin carboxyl-termin ( 605) 310 61.6 8.6e-09 NP_001230688 (OMIM: 604725) ubiquitin carboxyl-ter ( 362) 306 60.7 9.1e-09 XP_016874028 (OMIM: 604725) PREDICTED: ubiquitin c ( 352) 304 60.4 1.1e-08 NP_741994 (OMIM: 604725) ubiquitin carboxyl-termin ( 396) 304 60.5 1.2e-08 XP_016878257 (OMIM: 604728) PREDICTED: ubiquitin c ( 351) 246 51.2 6.7e-06 XP_016878256 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 246 51.2 7.9e-06 XP_016878255 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 246 51.2 7.9e-06 NP_001243631 (OMIM: 604728) ubiquitin carboxyl-ter ( 476) 246 51.3 8.4e-06 XP_016878252 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 246 51.3 8.7e-06 XP_016878254 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 246 51.3 8.7e-06 XP_016878253 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 246 51.3 8.7e-06 NP_006528 (OMIM: 604728) ubiquitin carboxyl-termin ( 520) 246 51.3 9e-06 NP_955475 (OMIM: 603486) ubiquitin carboxyl-termin ( 916) 227 48.5 0.00011 NP_003354 (OMIM: 603486) ubiquitin carboxyl-termin ( 963) 227 48.5 0.00012 XP_005251723 (OMIM: 615143) PREDICTED: ubiquitin c ( 675) 224 47.9 0.00012 XP_016869710 (OMIM: 615143) PREDICTED: ubiquitin c ( 675) 224 47.9 0.00012 NP_001103773 (OMIM: 615143) ubiquitin carboxyl-ter ( 914) 224 48.0 0.00016 NP_006667 (OMIM: 615143) ubiquitin carboxyl-termin ( 914) 224 48.0 0.00016 XP_011516463 (OMIM: 615143) PREDICTED: ubiquitin c ( 914) 224 48.0 0.00016 XP_011516464 (OMIM: 615143) PREDICTED: ubiquitin c ( 914) 224 48.0 0.00016 NP_001008563 (OMIM: 615143) ubiquitin carboxyl-ter ( 914) 224 48.0 0.00016 XP_005251722 (OMIM: 615143) PREDICTED: ubiquitin c ( 914) 224 48.0 0.00016 XP_005269318 (OMIM: 604731) PREDICTED: ubiquitin c ( 648) 219 47.1 0.00021 XP_016875774 (OMIM: 604731) PREDICTED: ubiquitin c ( 860) 219 47.2 0.00026 XP_016875773 (OMIM: 604731) PREDICTED: ubiquitin c ( 860) 219 47.2 0.00026 NP_006304 (OMIM: 604731) ubiquitin carboxyl-termin ( 952) 219 47.2 0.00028 NP_001239007 (OMIM: 604731) ubiquitin carboxyl-ter ( 981) 219 47.2 0.00029 >>NP_006581 (OMIM: 611594) U4/U6.U5 tri-snRNP-associated (565 aa) initn: 3760 init1: 3760 opt: 3760 Z-score: 3251.5 bits: 611.5 E(85289): 2.3e-174 Smith-Waterman score: 3760; 100.0% identity (100.0% similar) in 565 aa overlap (1-565:1-565) 10 20 30 40 50 60 pF1KE5 MSGRSKRESRGSTRGKRESESRGSSGRVKRERDREREPEAASSRGSPVRVKREFEPASAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MSGRSKRESRGSTRGKRESESRGSSGRVKRERDREREPEAASSRGSPVRVKREFEPASAR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EAPASVVPFVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EAPASVVPFVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ 490 500 510 520 530 540 550 560 pF1KE5 MITLSEAYIQIWKRRDNDETNQQGA ::::::::::::::::::::::::: NP_006 MITLSEAYIQIWKRRDNDETNQQGA 550 560 >>NP_001243654 (OMIM: 611594) U4/U6.U5 tri-snRNP-associa (565 aa) initn: 3760 init1: 3760 opt: 3760 Z-score: 3251.5 bits: 611.5 E(85289): 2.3e-174 Smith-Waterman score: 3760; 100.0% identity (100.0% similar) in 565 aa overlap (1-565:1-565) 10 20 30 40 50 60 pF1KE5 MSGRSKRESRGSTRGKRESESRGSSGRVKRERDREREPEAASSRGSPVRVKREFEPASAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSGRSKRESRGSTRGKRESESRGSSGRVKRERDREREPEAASSRGSPVRVKREFEPASAR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EAPASVVPFVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EAPASVVPFVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ 490 500 510 520 530 540 550 560 pF1KE5 MITLSEAYIQIWKRRDNDETNQQGA ::::::::::::::::::::::::: NP_001 MITLSEAYIQIWKRRDNDETNQQGA 550 560 >>NP_001243656 (OMIM: 611594) U4/U6.U5 tri-snRNP-associa (487 aa) initn: 3189 init1: 3189 opt: 3193 Z-score: 2763.9 bits: 521.1 E(85289): 3.3e-147 Smith-Waterman score: 3193; 99.0% identity (99.2% similar) in 482 aa overlap (84-565:6-487) 60 70 80 90 100 110 pF1KE5 FEPASAREAPASVVPFVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINR : . :::::::::::::::::::::::: NP_001 MLTAVPSHLFSAKNGRVDSEDRRSRHCPYLDTINR 10 20 30 120 130 140 150 160 170 pF1KE5 SVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFY 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE5 CLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKAN 100 110 120 130 140 150 240 250 260 270 280 290 pF1KE5 DYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAH 160 170 180 190 200 210 300 310 320 330 340 350 pF1KE5 VSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSM 220 230 240 250 260 270 360 370 380 390 400 410 pF1KE5 RIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQV 280 290 300 310 320 330 420 430 440 450 460 470 pF1KE5 PLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNF 340 350 360 370 380 390 480 490 500 510 520 530 pF1KE5 PITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQ 400 410 420 430 440 450 540 550 560 pF1KE5 VTDILPQMITLSEAYIQIWKRRDNDETNQQGA :::::::::::::::::::::::::::::::: NP_001 VTDILPQMITLSEAYIQIWKRRDNDETNQQGA 460 470 480 >>NP_001243655 (OMIM: 611594) U4/U6.U5 tri-snRNP-associa (488 aa) initn: 3164 init1: 3164 opt: 3164 Z-score: 2738.9 bits: 516.4 E(85289): 8.1e-146 Smith-Waterman score: 3164; 100.0% identity (100.0% similar) in 476 aa overlap (1-476:1-476) 10 20 30 40 50 60 pF1KE5 MSGRSKRESRGSTRGKRESESRGSSGRVKRERDREREPEAASSRGSPVRVKREFEPASAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSGRSKRESRGSTRGKRESESRGSSGRVKRERDREREPEAASSRGSPVRVKREFEPASAR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EAPASVVPFVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EAPASVVPFVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITGQAN 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ NP_001 GMNYKTSR >>NP_001243657 (OMIM: 611594) U4/U6.U5 tri-snRNP-associa (462 aa) initn: 2953 init1: 2805 opt: 2805 Z-score: 2429.9 bits: 459.2 E(85289): 1.3e-128 Smith-Waterman score: 2910; 92.7% identity (93.4% similar) in 482 aa overlap (84-565:6-462) 60 70 80 90 100 110 pF1KE5 FEPASAREAPASVVPFVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINR : . ::::::::::::::::::::::: NP_001 MLTAVPSHLFSAKNGRVDSEDRRSRHCPYLDTIN- 10 20 30 120 130 140 150 160 170 pF1KE5 SVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFY :.: . ::::::::::::::::::::::::::::: NP_001 -------------SFS-----------PFPTGRGLKSHAYIHSVQFSHHVFLNLHTLKFY 40 50 60 70 180 190 200 210 220 230 pF1KE5 CLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKAN 80 90 100 110 120 130 240 250 260 270 280 290 pF1KE5 DYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAH 140 150 160 170 180 190 300 310 320 330 340 350 pF1KE5 VSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSM 200 210 220 230 240 250 360 370 380 390 400 410 pF1KE5 RIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQV 260 270 280 290 300 310 420 430 440 450 460 470 pF1KE5 PLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNF 320 330 340 350 360 370 480 490 500 510 520 530 pF1KE5 PITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQ 380 390 400 410 420 430 540 550 560 pF1KE5 VTDILPQMITLSEAYIQIWKRRDNDETNQQGA :::::::::::::::::::::::::::::::: NP_001 VTDILPQMITLSEAYIQIWKRRDNDETNQQGA 440 450 460 >>XP_011530790 (OMIM: 611594) PREDICTED: U4/U6.U5 tri-sn (296 aa) initn: 1975 init1: 1975 opt: 1975 Z-score: 1717.5 bits: 326.7 E(85289): 6.3e-89 Smith-Waterman score: 1975; 100.0% identity (100.0% similar) in 296 aa overlap (270-565:1-296) 240 250 260 270 280 290 pF1KE5 LQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEM :::::::::::::::::::::::::::::: XP_011 MFLLVQRFGELMRKLWNPRNFKAHVSPHEM 10 20 30 300 310 320 330 340 350 pF1KE5 LQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKK 40 50 60 70 80 90 360 370 380 390 400 410 pF1KE5 LPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNIL 100 110 120 130 140 150 420 430 440 450 460 470 pF1KE5 AKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVD 160 170 180 190 200 210 480 490 500 510 520 530 pF1KE5 LREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILP 220 230 240 250 260 270 540 550 560 pF1KE5 QMITLSEAYIQIWKRRDNDETNQQGA :::::::::::::::::::::::::: XP_011 QMITLSEAYIQIWKRRDNDETNQQGA 280 290 >>XP_016858671 (OMIM: 611594) PREDICTED: U4/U6.U5 tri-sn (296 aa) initn: 1975 init1: 1975 opt: 1975 Z-score: 1717.5 bits: 326.7 E(85289): 6.3e-89 Smith-Waterman score: 1975; 100.0% identity (100.0% similar) in 296 aa overlap (270-565:1-296) 240 250 260 270 280 290 pF1KE5 LQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEM :::::::::::::::::::::::::::::: XP_016 MFLLVQRFGELMRKLWNPRNFKAHVSPHEM 10 20 30 300 310 320 330 340 350 pF1KE5 LQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKK 40 50 60 70 80 90 360 370 380 390 400 410 pF1KE5 LPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNIL 100 110 120 130 140 150 420 430 440 450 460 470 pF1KE5 AKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVD 160 170 180 190 200 210 480 490 500 510 520 530 pF1KE5 LREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILP 220 230 240 250 260 270 540 550 560 pF1KE5 QMITLSEAYIQIWKRRDNDETNQQGA :::::::::::::::::::::::::: XP_016 QMITLSEAYIQIWKRRDNDETNQQGA 280 290 >>XP_006711986 (OMIM: 611594) PREDICTED: U4/U6.U5 tri-sn (296 aa) initn: 1975 init1: 1975 opt: 1975 Z-score: 1717.5 bits: 326.7 E(85289): 6.3e-89 Smith-Waterman score: 1975; 100.0% identity (100.0% similar) in 296 aa overlap (270-565:1-296) 240 250 260 270 280 290 pF1KE5 LQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEM :::::::::::::::::::::::::::::: XP_006 MFLLVQRFGELMRKLWNPRNFKAHVSPHEM 10 20 30 300 310 320 330 340 350 pF1KE5 LQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKK 40 50 60 70 80 90 360 370 380 390 400 410 pF1KE5 LPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNIL 100 110 120 130 140 150 420 430 440 450 460 470 pF1KE5 AKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVD 160 170 180 190 200 210 480 490 500 510 520 530 pF1KE5 LREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILP 220 230 240 250 260 270 540 550 560 pF1KE5 QMITLSEAYIQIWKRRDNDETNQQGA :::::::::::::::::::::::::: XP_006 QMITLSEAYIQIWKRRDNDETNQQGA 280 290 >>XP_006711985 (OMIM: 611594) PREDICTED: U4/U6.U5 tri-sn (296 aa) initn: 1975 init1: 1975 opt: 1975 Z-score: 1717.5 bits: 326.7 E(85289): 6.3e-89 Smith-Waterman score: 1975; 100.0% identity (100.0% similar) in 296 aa overlap (270-565:1-296) 240 250 260 270 280 290 pF1KE5 LQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEM :::::::::::::::::::::::::::::: XP_006 MFLLVQRFGELMRKLWNPRNFKAHVSPHEM 10 20 30 300 310 320 330 340 350 pF1KE5 LQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKK 40 50 60 70 80 90 360 370 380 390 400 410 pF1KE5 LPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNIL 100 110 120 130 140 150 420 430 440 450 460 470 pF1KE5 AKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVD 160 170 180 190 200 210 480 490 500 510 520 530 pF1KE5 LREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILP 220 230 240 250 260 270 540 550 560 pF1KE5 QMITLSEAYIQIWKRRDNDETNQQGA :::::::::::::::::::::::::: XP_006 QMITLSEAYIQIWKRRDNDETNQQGA 280 290 >>XP_011530789 (OMIM: 611594) PREDICTED: U4/U6.U5 tri-sn (296 aa) initn: 1975 init1: 1975 opt: 1975 Z-score: 1717.5 bits: 326.7 E(85289): 6.3e-89 Smith-Waterman score: 1975; 100.0% identity (100.0% similar) in 296 aa overlap (270-565:1-296) 240 250 260 270 280 290 pF1KE5 LQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEM :::::::::::::::::::::::::::::: XP_011 MFLLVQRFGELMRKLWNPRNFKAHVSPHEM 10 20 30 300 310 320 330 340 350 pF1KE5 LQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKK 40 50 60 70 80 90 360 370 380 390 400 410 pF1KE5 LPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNIL 100 110 120 130 140 150 420 430 440 450 460 470 pF1KE5 AKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVD 160 170 180 190 200 210 480 490 500 510 520 530 pF1KE5 LREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILP 220 230 240 250 260 270 540 550 560 pF1KE5 QMITLSEAYIQIWKRRDNDETNQQGA :::::::::::::::::::::::::: XP_011 QMITLSEAYIQIWKRRDNDETNQQGA 280 290 565 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:27:08 2016 done: Tue Nov 8 05:27:10 2016 Total Scan time: 8.990 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]