FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6174, 91 aa 1>>>pF1KE6174 91 - 91 aa - 91 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3939+/-0.000559; mu= 4.8515+/- 0.034 mean_var=94.9123+/-18.551, 0's: 0 Z-trim(115.5): 2 B-trim: 0 in 0/53 Lambda= 0.131648 statistics sampled from 16084 (16086) to 16084 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.824), E-opt: 0.2 (0.494), width: 16 Scan time: 1.030 The best scores are: opt bits E(32554) CCDS30704.1 UQCRH gene_id:7388|Hs108|chr1 ( 91) 614 125.1 6e-30 CCDS76112.1 UQCRHL gene_id:440567|Hs108|chr1 ( 91) 587 120.0 2.1e-28 >>CCDS30704.1 UQCRH gene_id:7388|Hs108|chr1 (91 aa) initn: 614 init1: 614 opt: 614 Z-score: 651.2 bits: 125.1 E(32554): 6e-30 Smith-Waterman score: 614; 100.0% identity (100.0% similar) in 91 aa overlap (1-91:1-91) 10 20 30 40 50 60 pF1KE6 MGLEDEQKMLTESGDPEEEEEEEEELVDPLTTVREQCEQLEKCVKARERLELCDERVSSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 MGLEDEQKMLTESGDPEEEEEEEEELVDPLTTVREQCEQLEKCVKARERLELCDERVSSR 10 20 30 40 50 60 70 80 90 pF1KE6 SHTEEDCTEELFDFLHARDHCVAHKLFNNLK ::::::::::::::::::::::::::::::: CCDS30 SHTEEDCTEELFDFLHARDHCVAHKLFNNLK 70 80 90 >>CCDS76112.1 UQCRHL gene_id:440567|Hs108|chr1 (91 aa) initn: 587 init1: 587 opt: 587 Z-score: 623.4 bits: 120.0 E(32554): 2.1e-28 Smith-Waterman score: 587; 96.7% identity (98.9% similar) in 91 aa overlap (1-91:1-91) 10 20 30 40 50 60 pF1KE6 MGLEDEQKMLTESGDPEEEEEEEEELVDPLTTVREQCEQLEKCVKARERLELCDERVSSR :::::::::::::::::::::::::::::::::::::::::::::::::::: ::.:::: CCDS76 MGLEDEQKMLTESGDPEEEEEEEEELVDPLTTVREQCEQLEKCVKARERLELYDEHVSSR 10 20 30 40 50 60 70 80 90 pF1KE6 SHTEEDCTEELFDFLHARDHCVAHKLFNNLK :::::::::::::::::.::::::::::::: CCDS76 SHTEEDCTEELFDFLHAKDHCVAHKLFNNLK 70 80 90 91 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:04:50 2016 done: Tue Nov 8 10:04:51 2016 Total Scan time: 1.030 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]