FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2273, 559 aa 1>>>pF1KE2273 559 - 559 aa - 559 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.8781+/-0.000457; mu= -16.3702+/- 0.029 mean_var=406.9852+/-84.223, 0's: 0 Z-trim(120.8): 25 B-trim: 0 in 0/57 Lambda= 0.063575 statistics sampled from 36424 (36453) to 36424 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.427), width: 16 Scan time: 10.140 The best scores are: opt bits E(85289) XP_016883966 (OMIM: 601245) PREDICTED: chromatin a ( 559) 3734 356.8 1e-97 XP_016883967 (OMIM: 601245) PREDICTED: chromatin a ( 559) 3734 356.8 1e-97 NP_005432 (OMIM: 601245) chromatin assembly factor ( 559) 3734 356.8 1e-97 XP_011528057 (OMIM: 601245) PREDICTED: chromatin a ( 372) 2441 238.1 3.7e-62 >>XP_016883966 (OMIM: 601245) PREDICTED: chromatin assem (559 aa) initn: 3734 init1: 3734 opt: 3734 Z-score: 1875.3 bits: 356.8 E(85289): 1e-97 Smith-Waterman score: 3734; 99.8% identity (99.8% similar) in 559 aa overlap (1-559:1-559) 10 20 30 40 50 60 pF1KE2 MKVITCEIAWHNKEPVYSLDFQHGTAGRIHRLASAGVDTNVRIWKVEKGPDGKAIVEFLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MKVITCEIAWHNKEPVYSLDFQHGTAGRIHRLASAGVDTNVRIWKVEKGPDGKAIVEFLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VVKTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VVKTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 PLGQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGEARSYRMFHDDSMKSFFRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PLGQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGEARSYRMFHDDSMKSFFRRL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 SFTPDGSLLLTPAGCVESGENVMNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SFTPDGSLLLTPAGCVESGENVMNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFEL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 RPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 LAISSTDGYCSFVTFEKDELGIPLKEKPVLNMRTPDTAKKTKSQTHRGSSPGPRLVEGTP :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: XP_016 LAISSTDGYCSFVTFEKDELGIPLKEKPVLNMRTPDTAKKTKSQTHRGSSPGPRPVEGTP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 ASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQNTKAHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQNTKAHP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SRRVTLNTLQAWSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SRRVTLNTLQAWSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPP 490 500 510 520 530 540 550 pF1KE2 ELKRPRLDENKGGTESLDP ::::::::::::::::::: XP_016 ELKRPRLDENKGGTESLDP 550 >>XP_016883967 (OMIM: 601245) PREDICTED: chromatin assem (559 aa) initn: 3734 init1: 3734 opt: 3734 Z-score: 1875.3 bits: 356.8 E(85289): 1e-97 Smith-Waterman score: 3734; 99.8% identity (99.8% similar) in 559 aa overlap (1-559:1-559) 10 20 30 40 50 60 pF1KE2 MKVITCEIAWHNKEPVYSLDFQHGTAGRIHRLASAGVDTNVRIWKVEKGPDGKAIVEFLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MKVITCEIAWHNKEPVYSLDFQHGTAGRIHRLASAGVDTNVRIWKVEKGPDGKAIVEFLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VVKTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VVKTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 PLGQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGEARSYRMFHDDSMKSFFRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PLGQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGEARSYRMFHDDSMKSFFRRL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 SFTPDGSLLLTPAGCVESGENVMNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SFTPDGSLLLTPAGCVESGENVMNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFEL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 RPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 LAISSTDGYCSFVTFEKDELGIPLKEKPVLNMRTPDTAKKTKSQTHRGSSPGPRLVEGTP :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: XP_016 LAISSTDGYCSFVTFEKDELGIPLKEKPVLNMRTPDTAKKTKSQTHRGSSPGPRPVEGTP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 ASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQNTKAHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQNTKAHP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SRRVTLNTLQAWSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SRRVTLNTLQAWSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPP 490 500 510 520 530 540 550 pF1KE2 ELKRPRLDENKGGTESLDP ::::::::::::::::::: XP_016 ELKRPRLDENKGGTESLDP 550 >>NP_005432 (OMIM: 601245) chromatin assembly factor 1 s (559 aa) initn: 3734 init1: 3734 opt: 3734 Z-score: 1875.3 bits: 356.8 E(85289): 1e-97 Smith-Waterman score: 3734; 99.8% identity (99.8% similar) in 559 aa overlap (1-559:1-559) 10 20 30 40 50 60 pF1KE2 MKVITCEIAWHNKEPVYSLDFQHGTAGRIHRLASAGVDTNVRIWKVEKGPDGKAIVEFLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MKVITCEIAWHNKEPVYSLDFQHGTAGRIHRLASAGVDTNVRIWKVEKGPDGKAIVEFLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 NLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VVKTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 VVKTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 PLGQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGEARSYRMFHDDSMKSFFRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 PLGQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGEARSYRMFHDDSMKSFFRRL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 SFTPDGSLLLTPAGCVESGENVMNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SFTPDGSLLLTPAGCVESGENVMNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFEL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 RPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 RPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 LAISSTDGYCSFVTFEKDELGIPLKEKPVLNMRTPDTAKKTKSQTHRGSSPGPRLVEGTP :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: NP_005 LAISSTDGYCSFVTFEKDELGIPLKEKPVLNMRTPDTAKKTKSQTHRGSSPGPRPVEGTP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 ASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQNTKAHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 ASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQNTKAHP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SRRVTLNTLQAWSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SRRVTLNTLQAWSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPP 490 500 510 520 530 540 550 pF1KE2 ELKRPRLDENKGGTESLDP ::::::::::::::::::: NP_005 ELKRPRLDENKGGTESLDP 550 >>XP_011528057 (OMIM: 601245) PREDICTED: chromatin assem (372 aa) initn: 2437 init1: 2437 opt: 2441 Z-score: 1236.9 bits: 238.1 E(85289): 3.7e-62 Smith-Waterman score: 2441; 98.7% identity (99.5% similar) in 372 aa overlap (189-559:1-372) 160 170 180 190 200 210 pF1KE2 SKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCD-RVLRVYSIQKKRVAFNVSKMLSGIG ..:. ::::::::::::::::::::::::: XP_011 MGCQQRVLRVYSIQKKRVAFNVSKMLSGIG 10 20 30 220 230 240 250 260 270 pF1KE2 AEGEARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENVMNTTYVFSRKNLKRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AEGEARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPAGCVESGENVMNTTYVFSRKNLKRP 40 50 60 70 80 90 280 290 300 310 320 330 pF1KE2 IAHLPCPGKATLAVRCCPVYFELRPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IAHLPCPGKATLAVRCCPVYFELRPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFP 100 110 120 130 140 150 340 350 360 370 380 390 pF1KE2 FGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDELGIPLKEKPVLNMRTPDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FGYVSNIHYHTLSDISWSSDGAFLAISSTDGYCSFVTFEKDELGIPLKEKPVLNMRTPDT 160 170 180 190 200 210 400 410 420 430 440 450 pF1KE2 AKKTKSQTHRGSSPGPRLVEGTPASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVK ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: XP_011 AKKTKSQTHRGSSPGPRPVEGTPASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVK 220 230 240 250 260 270 460 470 480 490 500 510 pF1KE2 SPLPGPSEEKTLQPSSQNTKAHPSRRVTLNTLQAWSKTTPRRINLTPLKTDTPPSSVPTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SPLPGPSEEKTLQPSSQNTKAHPSRRVTLNTLQAWSKTTPRRINLTPLKTDTPPSSVPTS 280 290 300 310 320 330 520 530 540 550 pF1KE2 VISTPSTEEIQSETPGDAQGSPPELKRPRLDENKGGTESLDP :::::::::::::::::::::::::::::::::::::::::: XP_011 VISTPSTEEIQSETPGDAQGSPPELKRPRLDENKGGTESLDP 340 350 360 370 559 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:05:24 2016 done: Sun Nov 6 05:05:26 2016 Total Scan time: 10.140 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]