FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2273, 559 aa 1>>>pF1KE2273 559 - 559 aa - 559 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.5538+/-0.00109; mu= -8.6620+/- 0.065 mean_var=342.5107+/-71.662, 0's: 0 Z-trim(113.1): 27 B-trim: 775 in 1/53 Lambda= 0.069301 statistics sampled from 13721 (13737) to 13721 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.745), E-opt: 0.2 (0.422), width: 16 Scan time: 3.520 The best scores are: opt bits E(32554) CCDS13644.1 CHAF1B gene_id:8208|Hs108|chr21 ( 559) 3734 387.2 2.8e-107 >>CCDS13644.1 CHAF1B gene_id:8208|Hs108|chr21 (559 aa) initn: 3734 init1: 3734 opt: 3734 Z-score: 2039.5 bits: 387.2 E(32554): 2.8e-107 Smith-Waterman score: 3734; 99.8% identity (99.8% similar) in 559 aa overlap (1-559:1-559) 10 20 30 40 50 60 pF1KE2 MKVITCEIAWHNKEPVYSLDFQHGTAGRIHRLASAGVDTNVRIWKVEKGPDGKAIVEFLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MKVITCEIAWHNKEPVYSLDFQHGTAGRIHRLASAGVDTNVRIWKVEKGPDGKAIVEFLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 NLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 VVKTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VVKTLRGHLEDVYDICWATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 PLGQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGEARSYRMFHDDSMKSFFRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 PLGQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGEARSYRMFHDDSMKSFFRRL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 SFTPDGSLLLTPAGCVESGENVMNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SFTPDGSLLLTPAGCVESGENVMNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFEL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 RPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 RPVVETGVELMSLPYRLVFAVASEDSVLLYDTQQSFPFGYVSNIHYHTLSDISWSSDGAF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 LAISSTDGYCSFVTFEKDELGIPLKEKPVLNMRTPDTAKKTKSQTHRGSSPGPRLVEGTP :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: CCDS13 LAISSTDGYCSFVTFEKDELGIPLKEKPVLNMRTPDTAKKTKSQTHRGSSPGPRPVEGTP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 ASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQNTKAHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQNTKAHP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SRRVTLNTLQAWSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 SRRVTLNTLQAWSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSETPGDAQGSPP 490 500 510 520 530 540 550 pF1KE2 ELKRPRLDENKGGTESLDP ::::::::::::::::::: CCDS13 ELKRPRLDENKGGTESLDP 550 559 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:05:24 2016 done: Sun Nov 6 05:05:24 2016 Total Scan time: 3.520 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]