Result of FASTA (ccds) for pFN21AE1946
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1946, 501 aa
  1>>>pF1KE1946 501 - 501 aa - 501 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.1698+/-0.000985; mu= -1.9251+/- 0.059
 mean_var=316.3075+/-62.907, 0's: 0 Z-trim(115.2): 35  B-trim: 0 in 0/52
 Lambda= 0.072114
 statistics sampled from 15712 (15747) to 15712 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.787), E-opt: 0.2 (0.484), width:  16
 Scan time:  3.390

The best scores are:                                      opt bits E(32554)
CCDS13254.1 GDF5 gene_id:8200|Hs108|chr20          ( 501) 3458 373.2 3.7e-103
CCDS34926.1 GDF6 gene_id:392255|Hs108|chr8         ( 455)  746 91.0   3e-18
CCDS1701.1 GDF7 gene_id:151449|Hs108|chr2          ( 450)  666 82.7 9.4e-16
CCDS4958.1 BMP5 gene_id:653|Hs108|chr6             ( 454)  533 68.9 1.4e-11
CCDS437.1 BMP8A gene_id:353500|Hs108|chr1          ( 402)  531 68.6 1.5e-11
CCDS444.1 BMP8B gene_id:656|Hs108|chr1             ( 402)  526 68.1 2.1e-11
CCDS13455.1 BMP7 gene_id:655|Hs108|chr20           ( 431)  517 67.2 4.2e-11


>>CCDS13254.1 GDF5 gene_id:8200|Hs108|chr20               (501 aa)
 initn: 3458 init1: 3458 opt: 3458  Z-score: 1965.5  bits: 373.2 E(32554): 3.7e-103
Smith-Waterman score: 3458; 99.8% identity (100.0% similar) in 501 aa overlap (1-501:1-501)

               10        20        30        40        50        60
pF1KE1 MRLPKLLTFLLWYLAWLDLEFICTVLGAPDLGQRPQGTRPGLAKAEAKERPPLARNVFRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MRLPKLLTFLLWYLAWLDLEFICTVLGAPDLGQRPQGTRPGLAKAEAKERPPLARNVFRP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 GGHSYGGGATNANARAKGGTGQTGGLTQPKKDEPKKLPPRPGGPEPKPGHPPQTRQATAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GGHSYGGGATNANARAKGGTGQTGGLTQPKKDEPKKLPPRPGGPEPKPGHPPQTRQATAR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 TVTPKGQLPGGKAPPKAGSVPSSFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TVTPKGQLPGGKAPPKAGSVPSSFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 SDADRKGGNSSVKLEAGLANTITSFIDKGQDDRGPVVRKQRYVFDISALEKDGLLGAELR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SDADRKGGNSSVKLEAGLANTITSFIDKGQDDRGPVVRKQRYVFDISALEKDGLLGAELR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 ILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPASLLDVRSVPGLDGSGWEVFDIWKLF
       :::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
CCDS13 ILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPAALLDVRSVPGLDGSGWEVFDIWKLF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 RNFKNSAQLCLELEAWERGRAVDLRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RNFKNSAQLCLELEAWERGRAVDLRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 RSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFKDMGWDDWIIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFKDMGWDDWIIA
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE1 PLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFID
              430       440       450       460       470       480

              490       500 
pF1KE1 SANNVVYKQYEDMVVESCGCR
       :::::::::::::::::::::
CCDS13 SANNVVYKQYEDMVVESCGCR
              490       500 

>>CCDS34926.1 GDF6 gene_id:392255|Hs108|chr8              (455 aa)
 initn: 1187 init1: 746 opt: 746  Z-score: 441.2  bits: 91.0 E(32554): 3e-18
Smith-Waterman score: 1183; 51.0% identity (71.8% similar) in 386 aa overlap (155-501:80-455)

          130       140       150       160       170       180    
pF1KE1 KGQLPGGKAPPKAGSVPSSFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDAD
                                     ::  . : : : ..:::::::.::: : :.
CCDS34 KMQRAPRDSDAGREGQEPQPRPQDEPRAQQPRAQEPPGRGPRVVPHEYMLSIYRTYSIAE
      50        60        70        80        90       100         

          190       200       210        220        230       240  
pF1KE1 RKGGNSSVKLEAGLANTITSFIDKGQDDRGPV-VRKQRYVFDISAL-EKDGLLGAELRIL
       . : :.:    .  :::::::.:.: :: . . .:.:.:.::.: : .:. :.:::::..
CCDS34 KLGINASFFQSSKSANTITSFVDRGLDDLSHTPLRRQKYLFDVSMLSDKEELVGAELRLF
     110       120       130       140       150       160         

            250       260       270       280         290       300
pF1KE1 RKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPASLLDVRSV-P-GLDGSGWEVFDIWKLF
       :. ::    : .: .:   ...:  : :   :  :::.:.. : :   .::::::.:. .
CCDS34 RQAPS---APWGPPAG-PLHVQLFPCLS---PL-LLDARTLDPQGAPPAGWEVFDVWQGL
     170          180        190           200       210       220 

              310           320                   330       340    
pF1KE1 RNFKNSAQLCLELEA-W---ERGRAV------------DLRGLGFDRAARQVHEKALFLV
       :. .   ::::::.: :   . :.:             :::.::: : .:  .:.::..:
CCDS34 RH-QPWKQLCLELRAAWGELDAGEAEARARGPQQPPPPDLRSLGFGRRVRPPQERALLVV
              230       240       250       260       270       280

          350       360                         370        380     
pF1KE1 FGRTKKRDLFFNEIKARSGQDDKT------------------VYEYLFSQ-RRKRRAPLA
       : :.....::  :.. . :. . .                  .  .: :  ::.::. .:
CCDS34 FTRSQRKNLF-AEMREQLGSAEAAGPGAGAEGSWPPPSGAPDARPWLPSPGRRRRRTAFA
              290        300       310       320       330         

         390       400       410       420       430       440     
pF1KE1 TRQGKRPSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTN
       .:.::: .:. . :::.: ::::::..::::::::::::::.::::.:.:::::::::::
CCDS34 SRHGKRHGKKSRLRCSKKPLHVNFKELGWDDWIIAPLEYEAYHCEGVCDFPLRSHLEPTN
     340       350       360       370       380       390         

         450       460       470       480       490       500 
pF1KE1 HAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR
       ::.:::::::::: ::::.:::::.:.:::::.::..:::::::::::::::::::
CCDS34 HAIIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDAGNNVVYKQYEDMVVESCGCR
     400       410       420       430       440       450     

>>CCDS1701.1 GDF7 gene_id:151449|Hs108|chr2               (450 aa)
 initn: 976 init1: 654 opt: 666  Z-score: 396.3  bits: 82.7 E(32554): 9.4e-16
Smith-Waterman score: 966; 40.2% identity (63.5% similar) in 433 aa overlap (103-501:35-450)

             80        90       100       110       120       130  
pF1KE1 NARAKGGTGQTGGLTQPKKDEPKKLPPRPGGPEPKPGHPPQTRQATARTVTPKGQLPGGK
                                     ::  .::       . .::..   :  :. 
CCDS17 AAAALCLWLLSACRPRDGLEAAAVLRAAGAGPVRSPGGGGGG-GGGGRTLA---QAAGAA
           10        20        30        40         50           60

            140       150       160       170       180       190  
pF1KE1 APPKAGSVPSSFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGNSSV
       : : :..:: .   ..:   :        ::   ..::..:.::::.:.     :. .  
CCDS17 AVP-AAAVPRARAARRAAGSG--------FRNGSVVPHHFMMSLYRSLAGRAPAGAAAVS
                70        80                90       100       110 

            200       210       220        230       240       250 
pF1KE1 KLEAGLANTITSFIDKGQDDRGPVVRKQRYVFDISAL-EKDGLLGAELRILRKKPSDTAK
           : :.:::.: :.. .:.. .   : ..::.:.: . : ..:::::.::.   ... 
CCDS17 ASGHGRADTITGFTDQATQDESAAETGQSFLFDVSSLNDADEVVGAELRVLRRGSPESG-
             120       130       140       150       160       170 

             260        270       280       290       300          
pF1KE1 PAAPGGGRAAQLKL-SSCPSGRQPASLLDVRSVPGLDGSGWEVFDIWKLFRNFKNSAQ--
          ::.  .  : : :.::.. .   ::  :..  : :. ::.::.   .:  .   .  
CCDS17 ---PGSWTSPPLLLLSTCPGAARAPRLLYSRAAEPLVGQRWEAFDVADAMRRHRREPRPP
                 180       190       200       210       220       

        310         320       330          340       350       360 
pF1KE1 --LCLELEAWERG--RAVDLRGLGFDR---AARQVHEKALFLVFGRTKKRDLFFNEIKAR
         .:: :.:        . :: :::     ..  ..:.:...: .::.... .: ::.:.
CCDS17 RAFCLLLRAVAGPVPSPLALRRLGFGWPGGGGSAAEERAVLVVSSRTQRKESLFREIRAQ
       230       240       250       260       270       280       

                            370       380               390        
pF1KE1 S---------------GQDDKTVYEYLFSQRRKRRAPLATRQ--------GKRPSKNLKA
       .               :    .    . ..::.: :  .::         :.  ..  ..
CCDS17 ARALGAALASEPLPDPGTGTASPRAVIGGRRRRRTALAGTRTAQGSGGGAGRGHGRRGRS
       290       300       310       320       330       340       

      400       410       420       430       440       450        
pF1KE1 RCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDP
       ::::: :::.::..::::::::::.:::.::::::.:::::::::::::.::::.::: :
CCDS17 RCSRKPLHVDFKELGWDDWIIAPLDYEAYHCEGLCDFPLRSHLEPTNHAIIQTLLNSMAP
       350       360       370       380       390       400       

      460       470       480       490       500 
pF1KE1 ESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR
       ...: .::::.::::::::.::.:::::::::::::::.::::
CCDS17 DAAPASCCVPARLSPISILYIDAANNVVYKQYEDMVVEACGCR
       410       420       430       440       450

>>CCDS4958.1 BMP5 gene_id:653|Hs108|chr6                  (454 aa)
 initn: 509 init1: 454 opt: 533  Z-score: 321.5  bits: 68.9 E(32554): 1.4e-11
Smith-Waterman score: 545; 26.7% identity (58.5% similar) in 419 aa overlap (97-500:61-453)

         70        80        90         100       110       120    
pF1KE1 GGATNANARAKGGTGQTGGLTQPKKDEPKKLP--PRPGGPEPKPGHPPQTRQATARTVTP
                                     ::  ::: .:  . .  :        ..: 
CCDS49 DNHVHSSFIYRRLRNHERREIQREILSILGLPHRPRPFSPGKQASSAPLFMLDLYNAMTN
               40        50        60        70        80        90

          130       140       150          160       170           
pF1KE1 KGQLPGGKAPPKAGSVPSSFLLKKAREPGP---PREPKEPFRPPPITPHEYMLSLYRT--
       . .   ..   .:. .  .   .:.   .:   ::. .     :  :    . ::. :  
CCDS49 EENPEESEYSVRASLAEETRGARKGYPASPNGYPRRIQLSRTTPLTTQSPPLASLHDTNF
              100       110       120       130       140       150

     180       190       200       210       220       230         
pF1KE1 LSDADRKGGNSSVKLEAGLANTITSFIDKGQDDRGPVVRKQRYVFDISALEK-DGLLGAE
       :.:::             .. ........ .:      . ... ::.. . . ... .::
CCDS49 LNDAD-------------MVMSFVNLVERDKDFSHQRRHYKEFRFDLTQIPHGEAVTAAE
                           160       170       180       190       

      240       250       260       270        280       290       
pF1KE1 LRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPAS-LLDVRSVPGLDGSGWEVFDI-
       .:: . . ..  .  .    . .  .. .  ..:.    :::.:.. .::  :: :::: 
CCDS49 FRIYKDRSNNRFENETI---KISIYQIIKEYTNRDADLFLLDTRKAQALD-VGWLVFDIT
       200       210          220       230       240        250   

             300       310       320       330       340       350 
pF1KE1 -----WKLFRNFKNSAQLCLELEAWERGRAVDLRGLGFDRAARQVHEKALFLVFGRTKKR
            : .  : .:.  : :  :. . ::...... :.  ..::  ..   .. .  :  
CCDS49 VTSNHWVI--NPQNNLGLQLCAETGD-GRSINVKSAGL--VGRQGPQSKQPFMVAFFKAS
           260         270        280         290       300        

             360       370       380       390       400       410 
pF1KE1 DLFFNEIKARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFKD
       ....  ..: . . ...  .    :  .: . .    :   ... :  :... :.:.:.:
CCDS49 EVLLRSVRAANKRKNQNRNKSSSHQDSSRMSSV----GDYNTSEQKQACKKHELYVSFRD
      310       320       330       340           350       360    

             420       430       440       450       460       470 
pF1KE1 MGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRL
       .::.::::::  : ::.:.: : ::: .:.. ::::..:::.. : :. .:  ::.::.:
CCDS49 LGWQDWIIAPEGYAAFYCDGECSFPLNAHMNATNHAIVQTLVHLMFPDHVPKPCCAPTKL
          370       380       390       400       410       420    

             480       490       500 
pF1KE1 SPISILFIDSANNVVYKQYEDMVVESCGCR
       . ::.:..:...::. :.:..:::.:::: 
CCDS49 NAISVLYFDDSSNVILKKYRNMVVRSCGCH
          430       440       450    

>>CCDS437.1 BMP8A gene_id:353500|Hs108|chr1               (402 aa)
 initn: 483 init1: 431 opt: 531  Z-score: 321.0  bits: 68.6 E(32554): 1.5e-11
Smith-Waterman score: 533; 30.1% identity (58.8% similar) in 408 aa overlap (126-500:20-401)

         100       110       120       130       140       150     
pF1KE1 KLPPRPGGPEPKPGHPPQTRQATARTVTPKGQLPGGKAPPKAGSVPSSFLLKKARE----
                                     :  :: . ::   . :.  :  . :.    
CCDS43            MAARPGPLWLLGLTLCALGGGGPGLRPPP---GCPQRRLGARERRDVQR
                          10        20           30        40      

                       160       170       180        190       200
pF1KE1 --------PG-P-PREPKEPFRPPPITPHEYMLSLYRTLS-DADRKGGNSSVKLEAGLAN
               :: : :: :    : :  .:  .::.::.... : :. :. .  .:  : :.
CCDS43 EILAVLGLPGRPRPRAPPAASRLPASAPL-FMLDLYHAMAGDDDEDGAPAEQRL--GRAD
         50        60        70         80        90         100   

              210          220       230        240       250      
pF1KE1 TITSFIDKGQDDRGPVVRK---QRYVFDISALEK-DGLLGAELRILRKKPSDTAKPAAPG
        . ::..  . ::.   ..   ... ::.. .   ... .::.::  : ::      .  
CCDS43 LVMSFVNMVERDRALGHQEPHWKEFRFDLTQIPAGEAVTAAEFRIY-KVPSIHLLNRTL-
           110       120       130       140        150       160  

        260       270        280       290             300         
pF1KE1 GGRAAQLKLSSCPSGRQPASL-LDVRSVPGLDGSGWEVFDI------WKLFRNFKNSAQL
         ....... .  :.:.   . ::.... . :  :: :.:.      : : :.   . .:
CCDS43 --HVSMFQVVQEQSNRESDLFFLDLQTLRAGD-EGWLVLDVTAASDCWLLKRHKDLGLRL
               170       180       190        200       210        

     310       320         330       340       350       360       
pF1KE1 CLELEAWERGRAVD--LRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKARSGQDDK
        .: :    :..::  : ::  .:: :.  .. . ..: :..   .       :. .  .
CCDS43 YVETE---DGHSVDPGLAGLLGQRAPRS--QQPFVVTFFRASPSPI-------RTPRAVR
      220          230       240         250              260      

       370       380            390       400       410       420  
pF1KE1 TVYEYLFSQRRKRRAPLATR-----QGKRPSKNLKARCSRKALHVNFKDMGWDDWIIAPL
        . .   . ... . : :.:     .  : :.. .  : :. :.:.:.:.:: ::.::: 
CCDS43 PLRRR--QPKKSNELPQANRLPGIFDDVRGSHG-RQVCRRHELYVSFQDLGWLDWVIAPQ
        270         280       290        300       310       320   

            430       440       450       460       470       480  
pF1KE1 EYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSA
        : :..::: : ::: : .. ::::..:.:.. : :...: .::.::.::  :.:. ::.
CCDS43 GYSAYYCEGECSFPLDSCMNATNHAILQSLVHLMKPNAVPKACCAPTKLSATSVLYYDSS
           330       340       350       360       370       380   

            490       500 
pF1KE1 NNVVYKQYEDMVVESCGCR
       :::. .....:::..::: 
CCDS43 NNVILRKHRNMVVKACGCH
           390       400  

>>CCDS444.1 BMP8B gene_id:656|Hs108|chr1                  (402 aa)
 initn: 482 init1: 430 opt: 526  Z-score: 318.2  bits: 68.1 E(32554): 2.1e-11
Smith-Waterman score: 528; 29.7% identity (58.5% similar) in 407 aa overlap (126-500:20-401)

         100       110       120       130       140       150     
pF1KE1 KLPPRPGGPEPKPGHPPQTRQATARTVTPKGQLPGGKAPPKAGSVPSSFLLKKARE----
                                     :  :: . ::   . :.  :  . :.    
CCDS44            MTALPGPLWLLGLALCALGGGGPGLRPPP---GCPQRRLGARERRDVQR
                          10        20           30        40      

                       160       170       180        190       200
pF1KE1 --------PG-P-PREPKEPFRPPPITPHEYMLSLYRTLS-DADRKGGNSSVKLEAGLAN
               :: : :: :    : :  .:  .::.::.... : :. :. .  .:  : :.
CCDS44 EILAVLGLPGRPRPRAPPAASRLPASAPL-FMLDLYHAMAGDDDEDGAPAERRL--GRAD
         50        60        70         80        90         100   

              210          220       230        240       250      
pF1KE1 TITSFIDKGQDDRGPVVRK---QRYVFDISALEK-DGLLGAELRILRKKPSDTAKPAAPG
        . ::..  . ::.   ..   ... ::.. .   ... .::.::  : ::      .  
CCDS44 LVMSFVNMVERDRALGHQEPHWKEFRFDLTQIPAGEAVTAAEFRIY-KVPSIHLLNRTL-
           110       120       130       140        150       160  

        260       270        280       290             300         
pF1KE1 GGRAAQLKLSSCPSGRQPASL-LDVRSVPGLDGSGWEVFDI------WKLFRNFKNSAQL
         ....... .  :.:.   . ::.... . :  :: :.:.      : : :.   . .:
CCDS44 --HVSMFQVVQEQSNRESDLFFLDLQTLRAGD-EGWLVLDVTAASDCWLLKRHKDLGLRL
               170       180       190        200       210        

     310       320         330       340       350       360       
pF1KE1 CLELEAWERGRAVD--LRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKARSGQDDK
        .: :    :..::  : ::  .:: :.  .. . ..: :..   .       :. .  .
CCDS44 YVETE---DGHSVDPGLAGLLGQRAPRS--QQPFVVTFFRASPSPI-------RTPRAVR
      220          230       240         250              260      

       370       380           390       400       410       420   
pF1KE1 TVYEYLFSQRRKRRAPLATRQ----GKRPSKNLKARCSRKALHVNFKDMGWDDWIIAPLE
        . .   . ... . : :.:         ... .  : :. :.:.:.:.:: ::.:::  
CCDS44 PLRRR--QPKKSNELPQANRLPGIFDDVHGSHGRQVCRRHELYVSFQDLGWLDWVIAPQG
        270         280       290       300       310       320    

           430       440       450       460       470       480   
pF1KE1 YEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSAN
       : :..::: : ::: : .. ::::..:.:.. : :...: .::.::.::  :.:. ::.:
CCDS44 YSAYYCEGECSFPLDSCMNATNHAILQSLVHLMMPDAVPKACCAPTKLSATSVLYYDSSN
          330       340       350       360       370       380    

           490       500 
pF1KE1 NVVYKQYEDMVVESCGCR
       ::. .....:::..::: 
CCDS44 NVILRKHRNMVVKACGCH
          390       400  

>>CCDS13455.1 BMP7 gene_id:655|Hs108|chr20                (431 aa)
 initn: 483 init1: 451 opt: 517  Z-score: 312.8  bits: 67.2 E(32554): 4.2e-11
Smith-Waterman score: 517; 31.7% identity (62.9% similar) in 315 aa overlap (199-500:130-430)

      170       180       190       200       210          220     
pF1KE1 PHEYMLSLYRTLSDADRKGGNSSVKLEAGLANTITSFIDKGQDDR---GPVVRKQRYVFD
                                     :. . ::..  . :.    :  ..... ::
CCDS13 GQGFSYPYKAVFSTQGPPLASLQDSHFLTDADMVMSFVNLVEHDKEFFHPRYHHREFRFD
     100       110       120       130       140       150         

          230       240       250       260       270        280   
pF1KE1 ISAL-EKDGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPAS-LLDVRSV
       .: . : ... .::.:: .    .     .    : .  .. .   ::.    ::: :..
CCDS13 LSKIPEGEAVTAAEFRIYKDYIRERFDNETF---RISVYQVLQEHLGRESDLFLLDSRTL
     160       170       180       190          200       210      

           290             300       310       320        330      
pF1KE1 PGLDGSGWEVFDI------WKLFRNFKNSAQLCLELEAWERGRAVDLRGLGF-DRAARQV
        . .  :: ::::      : .  : ...  : : .:. . :.... .  :.  : . : 
CCDS13 WASE-EGWLVFDITATSNHWVV--NPRHNLGLQLSVETLD-GQSINPKLAGLIGRHGPQ-
        220        230         240       250        260       270  

        340       350       360        370       380       390     
pF1KE1 HEKALFLVFGRTKKRDLFFNEIKAR-SGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKN
        .:  :.: .  :  .. :  :..  : : ...  .   .:.  : : .:    .  :..
CCDS13 -NKQPFMV-AFFKATEVHFRSIRSTGSKQRSQNRSKTPKNQEALRMANVA----ENSSSD
               280       290       300       310           320     

         400       410       420       430       440       450     
pF1KE1 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNS
        .  :... :.:.:.:.::.::::::  : :..::: : ::: :... ::::..:::.. 
CCDS13 QRQACKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMNATNHAIVQTLVHF
         330       340       350       360       370       380     

         460       470       480       490       500 
pF1KE1 MDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR
       ..::..:  ::.::.:. ::.:..:...::. :.:..:::..::: 
CCDS13 INPETVPKPCCAPTQLNAISVLYFDDSSNVILKKYRNMVVRACGCH
         390       400       410       420       430 




501 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 13:05:10 2016 done: Sun Nov  6 13:05:10 2016
 Total Scan time:  3.390 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com