Result of FASTA (ccds) for pFN21AE6266
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6266, 254 aa
  1>>>pF1KE6266 254 - 254 aa - 254 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4287+/-0.000772; mu= 14.2792+/- 0.046
 mean_var=77.9030+/-15.793, 0's: 0 Z-trim(109.6): 171  B-trim: 0 in 0/51
 Lambda= 0.145311
 statistics sampled from 10855 (11031) to 10855 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.718), E-opt: 0.2 (0.339), width:  16
 Scan time:  1.850

The best scores are:                                      opt bits E(32554)
CCDS12809.1 KLK4 gene_id:9622|Hs108|chr19          ( 254) 1772 380.6 5.8e-106
CCDS12810.1 KLK5 gene_id:25818|Hs108|chr19         ( 293)  868 191.1 7.3e-49
CCDS12812.1 KLK7 gene_id:5650|Hs108|chr19          ( 253)  761 168.6 3.7e-42
CCDS12819.1 KLK11 gene_id:11012|Hs108|chr19        ( 250)  735 163.2 1.6e-40
CCDS12818.1 KLK11 gene_id:11012|Hs108|chr19        ( 282)  735 163.2 1.7e-40
CCDS12823.2 KLK14 gene_id:43847|Hs108|chr19        ( 267)  722 160.5 1.1e-39
CCDS12813.1 KLK8 gene_id:11202|Hs108|chr19         ( 260)  711 158.1 5.4e-39
CCDS42600.1 KLK8 gene_id:11202|Hs108|chr19         ( 305)  705 156.9 1.5e-38
CCDS12822.1 KLK13 gene_id:26085|Hs108|chr19        ( 277)  687 153.1 1.8e-37
CCDS12811.1 KLK6 gene_id:5653|Hs108|chr19          ( 244)  679 151.4 5.3e-37
CCDS12821.1 KLK12 gene_id:43849|Hs108|chr19        ( 248)  679 151.4 5.4e-37
CCDS12820.1 KLK12 gene_id:43849|Hs108|chr19        ( 254)  649 145.1 4.3e-35
CCDS5872.1 PRSS1 gene_id:5644|Hs108|chr7           ( 247)  632 141.6   5e-34
CCDS12816.1 KLK9 gene_id:284366|Hs108|chr19        ( 250)  622 139.5 2.1e-33
CCDS6545.1 PRSS3 gene_id:5646|Hs108|chr9           ( 247)  621 139.3 2.5e-33
CCDS56570.1 PRSS3 gene_id:5646|Hs108|chr9          ( 240)  611 137.1   1e-32
CCDS56571.1 PRSS3 gene_id:5646|Hs108|chr9          ( 261)  611 137.2 1.1e-32
CCDS47958.1 PRSS3 gene_id:5646|Hs108|chr9          ( 304)  611 137.2 1.2e-32
CCDS83236.1 PRSS2 gene_id:5645|Hs108|chr7          ( 247)  591 133.0 1.9e-31
CCDS59414.1 KLK7 gene_id:5650|Hs108|chr19          ( 181)  570 128.5 3.2e-30
CCDS12031.1 GZMM gene_id:3004|Hs108|chr19          ( 257)  529 120.0 1.6e-27
CCDS54297.1 KLK11 gene_id:11012|Hs108|chr19        ( 275)  519 117.9 7.3e-27
CCDS12817.1 KLK10 gene_id:5655|Hs108|chr19         ( 276)  512 116.4   2e-26
CCDS12046.1 CFD gene_id:1675|Hs108|chr19           ( 253)  500 113.9 1.1e-25
CCDS82261.1 CFD gene_id:1675|Hs108|chr19           ( 260)  492 112.2 3.5e-25
CCDS9630.1 CMA1 gene_id:1215|Hs108|chr14           ( 247)  485 110.7 9.4e-25
CCDS77203.1 PRSS57 gene_id:400668|Hs108|chr19      ( 282)  485 110.8   1e-24
CCDS12041.1 PRSS57 gene_id:400668|Hs108|chr19      ( 283)  485 110.8   1e-24
CCDS9631.1 CTSG gene_id:1511|Hs108|chr14           ( 255)  475 108.7 4.1e-24
CCDS3965.1 GZMA gene_id:3001|Hs108|chr5            ( 262)  474 108.5 4.9e-24
CCDS83235.1 PRSS2 gene_id:5645|Hs108|chr7          ( 261)  473 108.2 5.6e-24
CCDS9633.1 GZMB gene_id:3002|Hs108|chr14           ( 247)  471 107.8 7.2e-24
CCDS10852.1 CTRL gene_id:1506|Hs108|chr16          ( 264)  466 106.8 1.6e-23
CCDS9632.1 GZMH gene_id:2999|Hs108|chr14           ( 246)  465 106.5 1.7e-23
CCDS58790.1 TMPRSS3 gene_id:64699|Hs108|chr21      ( 453)  467 107.2 2.1e-23
CCDS13686.1 TMPRSS3 gene_id:64699|Hs108|chr21      ( 454)  465 106.7 2.8e-23
CCDS42599.1 KLK6 gene_id:5653|Hs108|chr19          ( 137)  455 104.3 4.6e-23
CCDS74240.1 GZMM gene_id:3004|Hs108|chr19          ( 218)  455 104.4 6.7e-23
CCDS75122.1 CORIN gene_id:10699|Hs108|chr4         ( 938)  451 104.0 3.8e-22
CCDS3477.1 CORIN gene_id:10699|Hs108|chr4          (1042)  451 104.1 4.1e-22
CCDS12088.1 TMPRSS9 gene_id:360200|Hs108|chr19     (1059)  446 103.0 8.6e-22
CCDS74433.1 KLK8 gene_id:11202|Hs108|chr19         ( 139)  427 98.4 2.7e-21
CCDS32490.1 CTRB1 gene_id:1504|Hs108|chr16         ( 263)  426 98.4 5.2e-21
CCDS5279.1 PLG gene_id:5340|Hs108|chr6             ( 810)  429 99.4 8.2e-21
CCDS32489.1 CTRB2 gene_id:440387|Hs108|chr16       ( 263)  419 96.9 1.4e-20
CCDS58675.1 KLK2 gene_id:3817|Hs108|chr19          ( 159)  414 95.7   2e-20
CCDS12044.1 AZU1 gene_id:566|Hs108|chr19           ( 251)  415 96.1 2.5e-20
CCDS34120.1 KLKB1 gene_id:3818|Hs108|chr4          ( 638)  420 97.4 2.5e-20
CCDS12808.1 KLK2 gene_id:3817|Hs108|chr19          ( 261)  414 95.9   3e-20
CCDS46155.1 KLK3 gene_id:354|Hs108|chr19           ( 218)  412 95.4 3.4e-20


>>CCDS12809.1 KLK4 gene_id:9622|Hs108|chr19               (254 aa)
 initn: 1772 init1: 1772 opt: 1772  Z-score: 2015.8  bits: 380.6 E(32554): 5.8e-106
Smith-Waterman score: 1772; 100.0% identity (100.0% similar) in 254 aa overlap (1-254:1-254)

               10        20        30        40        50        60
pF1KE6 MATAGNPWGWFLGYLILGVAGSLVSGSCSQIINGEDCSPHSQPWQAALVMENELFCSGVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MATAGNPWGWFLGYLILGVAGSLVSGSCSQIINGEDCSPHSQPWQAALVMENELFCSGVL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 VHPQWVLSAAHCFQNSYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VHPQWVLSAAHCFQNSYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 KLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 LYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNGYLQGLVSFGKAPCGQVGVPGVYTNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNGYLQGLVSFGKAPCGQVGVPGVYTNL
              190       200       210       220       230       240

              250    
pF1KE6 CKFTEWIEKTVQAS
       ::::::::::::::
CCDS12 CKFTEWIEKTVQAS
              250    

>>CCDS12810.1 KLK5 gene_id:25818|Hs108|chr19              (293 aa)
 initn: 813 init1: 385 opt: 868  Z-score: 990.8  bits: 191.1 E(32554): 7.3e-49
Smith-Waterman score: 868; 51.5% identity (77.1% similar) in 231 aa overlap (27-254:63-292)

                   10        20        30        40        50      
pF1KE6     MATAGNPWGWFLGYLILGVAGSLVSGSCSQIINGEDCSPHSQPWQAALVME-NELF
                                     : :.:::: ::. :.:::::::... :.:.
CCDS12 VSCDHPSNTVPSGSNQDLGAGAGEDARSDDSSSRIINGSDCDMHTQPWQAALLLRPNQLY
             40        50        60        70        80        90  

          60        70        80        90       100       110     
pF1KE6 CSGVLVHPQWVLSAAHCFQNSYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLAN
       :..:::::::.:.:::: .. . . :: .::    : :.:: ..  :. :: :..:  .:
CCDS12 CGAVLVHPQWLLTAAHCRKKVFRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSN
            100       110       120       130       140       150  

         120       130       140       150       160         170   
pF1KE6 DLMLIKLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLANGRM--PTVLQCVNVSVV
       :::::::.. .  .  .: :...:.::.::..:::::::   . ..  : ::::.:.::.
CCDS12 DLMLIKLNRRIRPTKDVRPINVSSHCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVL
            160       170       180       190       200       210  

           180       190       200       210       220       230   
pF1KE6 SEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNGYLQGLVSFGKAPCGQVGV
       :.. :   :      .:::::  .  .:::.::::::..::: ::::::.:  ::.. . 
CCDS12 SQKRCEDAYPRQIDDTMFCAGD-KAGRDSCQGDSGGPVVCNGSLQGLVSWGDYPCARPNR
            220       230        240       250       260       270 

           240       250     
pF1KE6 PGVYTNLCKFTEWIEKTVQAS 
       :::::::::::.::..:.::. 
CCDS12 PGVYTNLCKFTKWIQETIQANS
             280       290   

>>CCDS12812.1 KLK7 gene_id:5650|Hs108|chr19               (253 aa)
 initn: 741 init1: 368 opt: 761  Z-score: 870.4  bits: 168.6 E(32554): 3.7e-42
Smith-Waterman score: 761; 45.6% identity (73.0% similar) in 248 aa overlap (7-252:8-250)

                10        20        30        40        50         
pF1KE6  MATAGNPWGWFLGYLILGVAGSLVSGSCSQIINGEDCSPHSQPWQAALVMENELFCSGV
              :   .:  : : .::  ..:  ..::.:  :.  :.:::.::.  :.: :.::
CCDS12 MARSLLLPLQILLLSLALETAGEEAQG--DKIIDGAPCARGSHPWQVALLSGNQLHCGGV
               10        20          30        40        50        

      60        70        80        90       100       110         
pF1KE6 LVHPQWVLSAAHCFQNSYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLML
       ::. .:::.:::: .: ::. ::  .: .:..  .: ..:: : ::: :.    .:::::
CCDS12 LVNERWVLTAAHCKMNEYTVHLGSDTL-GDRR--AQRIKASKSFRHPGYSTQTHVNDLML
       60        70        80           90       100       110     

     120       130       140       150       160         170       
pF1KE6 IKLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLANGRM--PTVLQCVNVSVVSEEV
       .::. ..  :. .... . :.:   :..: :::::  ..  .  :. :.::.:...: . 
CCDS12 VKLNSQARLSSMVKKVRLPSRCEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQD
         120       130       140       150       160       170     

       180       190       200       210       220       230       
pF1KE6 CSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNGYLQGLVSFGKAPCGQVGVPGVY
       :.:.:  : . ::.:::  ...:..:::::::::.: : ::::::.:  :::: . ::::
CCDS12 CTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPLVCRGTLQGLVSWGTFPCGQPNDPGVY
         180       190       200       210       220       230     

       240       250     
pF1KE6 TNLCKFTEWIEKTVQAS 
       :..::::.::. :..   
CCDS12 TQVCKFTKWINDTMKKHR
         240       250   

>>CCDS12819.1 KLK11 gene_id:11012|Hs108|chr19             (250 aa)
 initn: 644 init1: 262 opt: 735  Z-score: 841.0  bits: 163.2 E(32554): 1.6e-40
Smith-Waterman score: 735; 41.7% identity (72.5% similar) in 247 aa overlap (12-252:4-248)

               10        20        30        40        50        60
pF1KE6 MATAGNPWGWFLGYLILGVAGSLVSGSCSQIINGEDCSPHSQPWQAALVMENELFCSGVL
                  :  ..:..: .::.:  ..::.: .:.::::::::::  ...:.:...:
CCDS12         MRILQLILLALATGLVGGE-TRIIKGFECKPHSQPWQAALFEKTRLLCGATL
                       10         20        30        40        50 

               70        80        90       100       110          
pF1KE6 VHPQWVLSAAHCFQNSYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLA----ND
       . :.:.:.::::..  : . :: :.:. . :   :   :. :  :: .:  :      ::
CCDS12 IAPRWLLTAAHCLKPRYIVHLGQHNLQKE-EGCEQTRTATESFPHPGFNNSLPNKDHRND
              60        70        80         90       100       110

        120       130       140       150         160       170    
pF1KE6 LMLIKLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLANG--RMPTVLQCVNVSVVS
       .::.:.   :: . ..: ....:.: :::.:::.::::  ..   :.: .:.:.:.... 
CCDS12 IMLVKMASPVSITWAVRPLTLSSRCVTAGTSCLISGWGSTSSPQLRLPHTLRCANITIIE
              120       130       140       150       160       170

          180       190       200       210       220       230    
pF1KE6 EEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNGYLQGLVSFGKAPCGQVGVP
       .. : . :      .: ::.  .  ::::.:::::::.::  :::..:.:. ::. .  :
CCDS12 HQKCENAYPGNITDTMVCASVQEGGKDSCQGDSGGPLVCNQSLQGIISWGQDPCAITRKP
              180       190       200       210       220       230

          240       250    
pF1KE6 GVYTNLCKFTEWIEKTVQAS
       ::::..::...::..:..  
CCDS12 GVYTKVCKYVDWIQETMKNN
              240       250

>>CCDS12818.1 KLK11 gene_id:11012|Hs108|chr19             (282 aa)
 initn: 644 init1: 262 opt: 735  Z-score: 840.3  bits: 163.2 E(32554): 1.7e-40
Smith-Waterman score: 735; 41.7% identity (72.5% similar) in 247 aa overlap (12-252:36-280)

                                  10        20        30        40 
pF1KE6                    MATAGNPWGWFLGYLILGVAGSLVSGSCSQIINGEDCSPHS
                                     :  ..:..: .::.:  ..::.: .:.:::
CCDS12 WLRDWKSSGRGLTAAKEPGARSSPLQAMRILQLILLALATGLVGGE-TRIIKGFECKPHS
          10        20        30        40        50         60    

              50        60        70        80        90       100 
pF1KE6 QPWQAALVMENELFCSGVLVHPQWVLSAAHCFQNSYTIGLGLHSLEADQEPGSQMVEASL
       :::::::  ...:.:...:. :.:.:.::::..  : . :: :.:. . :   :   :. 
CCDS12 QPWQAALFEKTRLLCGATLIAPRWLLTAAHCLKPRYIVHLGQHNLQKE-EGCEQTRTATE
           70        80        90       100       110        120   

             110           120       130       140       150       
pF1KE6 SVRHPEYNRPLLA----NDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLA
       :  :: .:  :      ::.::.:.   :: . ..: ....:.: :::.:::.::::  .
CCDS12 SFPHPGFNNSLPNKDHRNDIMLVKMASPVSITWAVRPLTLSSRCVTAGTSCLISGWGSTS
           130       140       150       160       170       180   

         160       170       180       190       200       210     
pF1KE6 NG--RMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNG
       .   :.: .:.:.:.... .. : . :      .: ::.  .  ::::.:::::::.:: 
CCDS12 SPQLRLPHTLRCANITIIEHQKCENAYPGNITDTMVCASVQEGGKDSCQGDSGGPLVCNQ
           190       200       210       220       230       240   

         220       230       240       250    
pF1KE6 YLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQAS
        :::..:.:. ::. .  :::::..::...::..:..  
CCDS12 SLQGIISWGQDPCAITRKPGVYTKVCKYVDWIQETMKNN
           250       260       270       280  

>>CCDS12823.2 KLK14 gene_id:43847|Hs108|chr19             (267 aa)
 initn: 663 init1: 376 opt: 722  Z-score: 825.9  bits: 160.5 E(32554): 1.1e-39
Smith-Waterman score: 722; 43.6% identity (71.0% similar) in 241 aa overlap (16-252:26-265)

                         10        20        30        40        50
pF1KE6           MATAGNPWGWFLGYLILGVAGSLVSGSCSQIINGEDCSPHSQPWQAALVM
                                .:..: .  . . ..::.:. :.  ::::::::. 
CCDS12 MSLRVLGSGTWPSAPKMFLLLTALQVLAIAMTQSQEDENKIIGGHTCTRSSQPWQAALLA
               10        20        30        40        50        60

                 60        70        80        90       100        
pF1KE6 --ENELFCSGVLVHPQWVLSAAHCFQNSYTIGLGLHSLEADQEPGSQMVEASLSVRHPEY
         . ...:.:.:.  :::..:::: .    ..:: :.:.   :  .:....  .: ::.:
CCDS12 GPRRRFLCGGALLSGQWVITAAHCGRPILQVALGKHNLRR-WEATQQVLRVVRQVTHPNY
               70        80        90       100        110         

      110       120       130       140       150         160      
pF1KE6 NRPLLANDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLAN--GRMPTVLQ
       :     :::::..:.. .  . ..: : ... : . :.:: ::::: ...  .:.:. ::
CCDS12 NSRTHDNDLMLLQLQQPARIGRAVRPIEVTQACASPGTSCRVSGWGTISSPIARYPASLQ
     120       130       140       150       160       170         

        170       180       190       200       210       220      
pF1KE6 CVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNGYLQGLVSFGKA
       :::...  .:::.: :     :.: :::  :  ::::.:::::::.: : ::::::.:  
CCDS12 CVNINISPDEVCQKAYPRTITPGMVCAGVPQGGKDSCQGDSGGPLVCRGQLQGLVSWGME
     180       190       200       210       220       230         

        230       240       250    
pF1KE6 PCGQVGVPGVYTNLCKFTEWIEKTVQAS
        :.  : :::::::::.  :::.:..  
CCDS12 RCALPGYPGVYTNLCKYRSWIEETMRDK
     240       250       260       

>>CCDS12813.1 KLK8 gene_id:11202|Hs108|chr19              (260 aa)
 initn: 581 init1: 233 opt: 711  Z-score: 813.6  bits: 158.1 E(32554): 5.4e-39
Smith-Waterman score: 711; 40.1% identity (71.7% similar) in 247 aa overlap (10-251:12-256)

                 10        20        30        40        50        
pF1KE6   MATAGNPWGWFLGYLILGVAGSLVSGSCSQIINGEDCSPHSQPWQAALVMENELFCSG
                  :..  :. :. ..   .. .....:..:.:::::::::: . ..:.:.:
CCDS12 MGRPRPRAAKTWMFLLLLGGAWAGHSRAQEDKVLGGHECQPHSQPWQAALFQGQQLLCGG
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KE6 VLVHPQWVLSAAHCFQNSYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLAN---
       :::  .:::.:::: . .::. :: :::.  . :  : . .  :. :: ::   . .   
CCDS12 VLVGGNWVLTAAHCKKPKYTVRLGDHSLQNKDGP-EQEIPVVQSIPHPCYNSSDVEDHNH
               70        80        90        100       110         

         120       130       140       150       160         170   
pF1KE6 DLMLIKLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLANGR--MPTVLQCVNVSVV
       ::::..: ...: .. .. ::.:..:   :..: ::::: ... :  .: .:.:..:.. 
CCDS12 DLMLLQLRDQASLGSKVKPISLADHCTQPGQKCTVSGWGTVTSPRENFPDTLNCAEVKIF
     120       130       140       150       160       170         

           180       190       200       210       220       230   
pF1KE6 SEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNGYLQGLVSFGKAPCGQVGV
        .. :   :      .: :::...   :.:.:::::::.:.: :::..:.:. :::.   
CCDS12 PQKKCEDAYPGQITDGMVCAGSSKGA-DTCQGDSGGPLVCDGALQGITSWGSDPCGRSDK
     180       190       200        210       220       230        

           240       250     
pF1KE6 PGVYTNLCKFTEWIEKTVQAS 
       ::::::.:.. .::.: .    
CCDS12 PGVYTNICRYLDWIKKIIGSKG
      240       250       260

>>CCDS42600.1 KLK8 gene_id:11202|Hs108|chr19              (305 aa)
 initn: 620 init1: 233 opt: 705  Z-score: 805.8  bits: 156.9 E(32554): 1.5e-38
Smith-Waterman score: 705; 40.4% identity (70.8% similar) in 250 aa overlap (7-251:56-301)

                                       10        20        30      
pF1KE6                         MATAGNPWGWFLGYLILGVAGSLVSGSCSQIINGED
                                     : ::  . :  ... :   .. .....:..
CCDS42 GSLDLLTKLYAENLPCVHLNPQWPSQPSHCPRGWRSNPLPPAAGHS--RAQEDKVLGGHE
          30        40        50        60        70          80   

         40        50        60        70        80        90      
pF1KE6 CSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCFQNSYTIGLGLHSLEADQEPGSQM
       :.:::::::::: . ..:.:.::::  .:::.:::: . .::. :: :::.  . :  : 
CCDS42 CQPHSQPWQAALFQGQQLLCGGVLVGGNWVLTAAHCKKPKYTVRLGDHSLQNKDGP-EQE
            90       100       110       120       130        140  

        100       110          120       130       140       150   
pF1KE6 VEASLSVRHPEYNRPLLAN---DLMLIKLDESVSESDTIRSISIASQCPTAGNSCLVSGW
       . .  :. :: ::   . .   ::::..: ...: .. .. ::.:..:   :..: ::::
CCDS42 IPVVQSIPHPCYNSSDVEDHNHDLMLLQLRDQASLGSKVKPISLADHCTQPGQKCTVSGW
            150       160       170       180       190       200  

           160         170       180       190       200       210 
pF1KE6 GLLANGR--MPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPL
       : ... :  .: .:.:..:..  .. :   :      .: :::...   :.:.:::::::
CCDS42 GTVTSPRENFPDTLNCAEVKIFPQKKCEDAYPGQITDGMVCAGSSKGA-DTCQGDSGGPL
            210       220       230       240       250        260 

             220       230       240       250     
pF1KE6 ICNGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTVQAS 
       .:.: :::..:.:. :::.   ::::::.:.. .::.: .    
CCDS42 VCDGALQGITSWGSDPCGRSDKPGVYTNICRYLDWIKKIIGSKG
             270       280       290       300     

>>CCDS12822.1 KLK13 gene_id:26085|Hs108|chr19             (277 aa)
 initn: 618 init1: 320 opt: 687  Z-score: 786.0  bits: 153.1 E(32554): 1.8e-37
Smith-Waterman score: 690; 41.1% identity (67.7% similar) in 263 aa overlap (7-252:3-263)

               10        20        30                  40        50
pF1KE6 MATAGNPWGWFLGYLILGVAGSLVSGSCSQIIN----------GEDCSPHSQPWQAALVM
             : .  .. : :...:. ::   :...:          :  : ::::::::::..
CCDS12     MWPLALVIASLTLALSGG-VSQESSKVLNTNGTSGFLPGGYTCFPHSQPWQAALLV
                   10         20        30        40        50     

               60        70        80        90       100       110
pF1KE6 ENELFCSGVLVHPQWVLSAAHCFQNSYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNR
       ...:.:.::::::.:::.::::....  . :: :.: .  : : :. :.  :. :::: :
CCDS12 QGRLLCGGVLVHPKWVLTAAHCLKEGLKVYLGKHAL-GRVEAGEQVREVVHSIPHPEYRR
          60        70        80        90        100       110    

                  120       130       140        150       160     
pF1KE6 -PLLAN---DLMLIKLDESVSESDTIRSISIASQCP-TAGNSCLVSGWGLLANGRM--PT
        :   :   :.::..:.  :. .  :... .. .   : :..: :::::  .. ..  : 
CCDS12 SPTHLNHDHDIMLLELQSPVQLTGYIQTLPLSHNNRLTPGTTCRVSGWGTTTSPQVNYPK
          120       130       140       150       160       170    

           170       180       190       200       210       220   
pF1KE6 VLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNGYLQGLVSF
       .:::.:... :.: : ..:      .:.:::  .  ::::.:::::::.::  : :.::.
CCDS12 TLQCANIQLRSDEECRQVYPGKITDNMLCAGTKEGGKDSCEGDSGGPLVCNRTLYGIVSW
          180       190       200       210       220       230    

           230       240       250                
pF1KE6 GKAPCGQVGVPGVYTNLCKFTEWIEKTVQAS            
       :  ::::   ::::: . ... ::..:..              
CCDS12 GDFPCGQPDRPGVYTRVSRYVLWIRETIRKYETQQQKWLKGPQ
          240       250       260       270       

>>CCDS12811.1 KLK6 gene_id:5653|Hs108|chr19               (244 aa)
 initn: 676 init1: 488 opt: 679  Z-score: 777.7  bits: 151.4 E(32554): 5.3e-37
Smith-Waterman score: 679; 42.5% identity (71.5% similar) in 228 aa overlap (29-253:20-243)

               10        20        30        40        50        60
pF1KE6 MATAGNPWGWFLGYLILGVAGSLVSGSCSQIINGEDCSPHSQPWQAALVMENELFCSGVL
                                   .....:  :.  :.:.::::   ..:.:.:::
CCDS12          MKKLMVVLSLIAAAWAEEQNKLVHGGPCDKTSHPYQAALYTSGHLLCGGVL
                        10        20        30        40        50 

               70        80           90       100       110       
pF1KE6 VHPQWVLSAAHCFQNSYTIGLGLHSL---EADQEPGSQMVEASLSVRHPEYNRPLLANDL
       .:: :::.:::: . .  . :: :.:   :..:: .: .:.:   : ::.:.     .:.
CCDS12 IHPLWVLTAAHCKKPNLQVFLGKHNLRQRESSQEQSS-VVRA---VIHPDYDAASHDQDI
              60        70        80         90          100       

       120       130       140       150       160       170       
pF1KE6 MLIKLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEV
       ::..: . .. :. :. . .  .: .  .:: . :::  :.: .: ..::. . .::.: 
CCDS12 MLLRLARPAKLSELIQPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREE
       110       120       130       140       150       160       

       180       190       200       210       220       230       
pF1KE6 CSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNGYLQGLVSFGKAPCGQVGVPGVY
       : . :      .:.:::  .  ::::.:::::::.:. .:.::::.:. :::.   ::::
CCDS12 CEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCGSKEKPGVY
       170       180       190       200       210       220       

       240       250    
pF1KE6 TNLCKFTEWIEKTVQAS
       ::.:..:.::.::.:: 
CCDS12 TNVCRYTNWIQKTIQAK
       230       240    




254 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 11:37:23 2016 done: Tue Nov  8 11:37:23 2016
 Total Scan time:  1.850 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com