FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1754, 131 aa 1>>>pF1KE1754 131 - 131 aa - 131 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7253+/-0.000235; mu= 12.2932+/- 0.015 mean_var=106.3595+/-21.255, 0's: 0 Z-trim(125.4): 10 B-trim: 2167 in 1/58 Lambda= 0.124362 statistics sampled from 48910 (48920) to 48910 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.872), E-opt: 0.2 (0.574), width: 16 Scan time: 5.720 The best scores are: opt bits E(85289) NP_001120713 (OMIM: 605854) bcl-2-binding componen ( 131) 938 176.8 8.9e-45 XP_006723204 (OMIM: 605854) PREDICTED: bcl-2-bindi ( 193) 714 136.8 1.5e-32 NP_055232 (OMIM: 605854) bcl-2-binding component 3 ( 193) 714 136.8 1.5e-32 XP_011525024 (OMIM: 605854) PREDICTED: bcl-2-bindi ( 209) 714 136.8 1.6e-32 NP_001120712 (OMIM: 605854) bcl-2-binding componen ( 261) 272 57.6 1.4e-08 NP_001120714 (OMIM: 605854) bcl-2-binding componen ( 101) 261 55.2 2.7e-08 >>NP_001120713 (OMIM: 605854) bcl-2-binding component 3 (131 aa) initn: 938 init1: 938 opt: 938 Z-score: 924.9 bits: 176.8 E(85289): 8.9e-45 Smith-Waterman score: 938; 100.0% identity (100.0% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE1 MKFGMGSAQACPCQVPRAASTTWVPCQICGPQPSLSLAEQHLESPVPSAPGALAGGPTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKFGMGSAQACPCQVPRAASTTWVPCQICGPQPSLSLAEQHLESPVPSAPGALAGGPTQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 APGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 APGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPLP 70 80 90 100 110 120 130 pF1KE1 RGHRAPEMEPN ::::::::::: NP_001 RGHRAPEMEPN 130 >>XP_006723204 (OMIM: 605854) PREDICTED: bcl-2-binding c (193 aa) initn: 714 init1: 714 opt: 714 Z-score: 705.5 bits: 136.8 E(85289): 1.5e-32 Smith-Waterman score: 714; 100.0% identity (100.0% similar) in 102 aa overlap (30-131:92-193) 10 20 30 40 50 pF1KE1 MKFGMGSAQACPCQVPRAASTTWVPCQICGPQPSLSLAEQHLESPVPSAPGALAGGPTQ :::::::::::::::::::::::::::::: XP_006 PTAPPAVTAALGGSRWPGGPRSRPRGPRPDGPQPSLSLAEQHLESPVPSAPGALAGGPTQ 70 80 90 100 110 120 60 70 80 90 100 110 pF1KE1 AAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPL 130 140 150 160 170 180 120 130 pF1KE1 PRGHRAPEMEPN :::::::::::: XP_006 PRGHRAPEMEPN 190 >>NP_055232 (OMIM: 605854) bcl-2-binding component 3 iso (193 aa) initn: 714 init1: 714 opt: 714 Z-score: 705.5 bits: 136.8 E(85289): 1.5e-32 Smith-Waterman score: 714; 100.0% identity (100.0% similar) in 102 aa overlap (30-131:92-193) 10 20 30 40 50 pF1KE1 MKFGMGSAQACPCQVPRAASTTWVPCQICGPQPSLSLAEQHLESPVPSAPGALAGGPTQ :::::::::::::::::::::::::::::: NP_055 PTAPPAVTAALGGSRWPGGPRSRPRGPRPDGPQPSLSLAEQHLESPVPSAPGALAGGPTQ 70 80 90 100 110 120 60 70 80 90 100 110 pF1KE1 AAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_055 AAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPL 130 140 150 160 170 180 120 130 pF1KE1 PRGHRAPEMEPN :::::::::::: NP_055 PRGHRAPEMEPN 190 >>XP_011525024 (OMIM: 605854) PREDICTED: bcl-2-binding c (209 aa) initn: 714 init1: 714 opt: 714 Z-score: 705.1 bits: 136.8 E(85289): 1.6e-32 Smith-Waterman score: 714; 100.0% identity (100.0% similar) in 102 aa overlap (30-131:108-209) 10 20 30 40 50 pF1KE1 MKFGMGSAQACPCQVPRAASTTWVPCQICGPQPSLSLAEQHLESPVPSAPGALAGGPTQ :::::::::::::::::::::::::::::: XP_011 PTAPPAVTAALGGSRWPGGPRSRPRGPRPDGPQPSLSLAEQHLESPVPSAPGALAGGPTQ 80 90 100 110 120 130 60 70 80 90 100 110 pF1KE1 AAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPL 140 150 160 170 180 190 120 130 pF1KE1 PRGHRAPEMEPN :::::::::::: XP_011 PRGHRAPEMEPN 200 >>NP_001120712 (OMIM: 605854) bcl-2-binding component 3 (261 aa) initn: 299 init1: 243 opt: 272 Z-score: 275.3 bits: 57.6 E(85289): 1.4e-08 Smith-Waterman score: 272; 65.6% identity (75.0% similar) in 64 aa overlap (1-62:1-58) 10 20 30 40 50 pF1KE1 MKFGMGSAQACPCQVPRAASTTWVPCQICGPQPSLSLAEQHL-ESPVPSAPGALAG-GPT :::::::::::::::::::::::::::::::. :.: ..: . ::: : :: NP_001 MKFGMGSAQACPCQVPRAASTTWVPCQICGPR------ERHGPRTPGGQLPGARRGPGPR 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 QAAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLP . :: NP_001 RPAPLPARPPGALGSVLRPLRARPGCRPRRPHPAARCLPLRPHRPTRRHRRPGGFPLAWG 60 70 80 90 100 110 >>NP_001120714 (OMIM: 605854) bcl-2-binding component 3 (101 aa) initn: 292 init1: 246 opt: 261 Z-score: 269.9 bits: 55.2 E(85289): 2.7e-08 Smith-Waterman score: 261; 59.7% identity (71.6% similar) in 67 aa overlap (1-65:1-67) 10 20 30 40 50 pF1KE1 MKFGMGSAQACPCQVPRAASTTWVPCQICGPQPSLSLAEQHLESPVPSAPG--ALAGGPT ::::::::::::::::::::::::::::: . . . ::.:: : : ::. :: NP_001 MKFGMGSAQACPCQVPRAASTTWVPCQICETRGAAAAPPLTLEGPVQSHHGTPALTQGPQ 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 QAAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLP . :.. NP_001 SPRDGAQLGACTRPVDVRDSGGRPLPPPDTLASAGDFLCTM 70 80 90 100 131 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 13:19:05 2016 done: Sun Nov 6 13:19:06 2016 Total Scan time: 5.720 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]