FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1754, 131 aa 1>>>pF1KE1754 131 - 131 aa - 131 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6881+/-0.000532; mu= 12.6796+/- 0.032 mean_var=110.0968+/-21.645, 0's: 0 Z-trim(118.1): 5 B-trim: 0 in 0/54 Lambda= 0.122233 statistics sampled from 18973 (18978) to 18973 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.879), E-opt: 0.2 (0.583), width: 16 Scan time: 1.920 The best scores are: opt bits E(32554) CCDS46130.1 BBC3 gene_id:27113|Hs108|chr19 ( 131) 938 174.0 2.4e-44 CCDS12697.1 BBC3 gene_id:27113|Hs108|chr19 ( 193) 714 134.6 2.4e-32 >>CCDS46130.1 BBC3 gene_id:27113|Hs108|chr19 (131 aa) initn: 938 init1: 938 opt: 938 Z-score: 909.6 bits: 174.0 E(32554): 2.4e-44 Smith-Waterman score: 938; 100.0% identity (100.0% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE1 MKFGMGSAQACPCQVPRAASTTWVPCQICGPQPSLSLAEQHLESPVPSAPGALAGGPTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MKFGMGSAQACPCQVPRAASTTWVPCQICGPQPSLSLAEQHLESPVPSAPGALAGGPTQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 APGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 APGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPLP 70 80 90 100 110 120 130 pF1KE1 RGHRAPEMEPN ::::::::::: CCDS46 RGHRAPEMEPN 130 >>CCDS12697.1 BBC3 gene_id:27113|Hs108|chr19 (193 aa) initn: 714 init1: 714 opt: 714 Z-score: 694.1 bits: 134.6 E(32554): 2.4e-32 Smith-Waterman score: 714; 100.0% identity (100.0% similar) in 102 aa overlap (30-131:92-193) 10 20 30 40 50 pF1KE1 MKFGMGSAQACPCQVPRAASTTWVPCQICGPQPSLSLAEQHLESPVPSAPGALAGGPTQ :::::::::::::::::::::::::::::: CCDS12 PTAPPAVTAALGGSRWPGGPRSRPRGPRPDGPQPSLSLAEQHLESPVPSAPGALAGGPTQ 70 80 90 100 110 120 60 70 80 90 100 110 pF1KE1 AAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 AAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLIMGLLPL 130 140 150 160 170 180 120 130 pF1KE1 PRGHRAPEMEPN :::::::::::: CCDS12 PRGHRAPEMEPN 190 131 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 13:19:05 2016 done: Sun Nov 6 13:19:05 2016 Total Scan time: 1.920 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]